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The application of a recently isolated strain of Bacteroides (GB-124) to identify human sources of...
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The application of a recently isolated strain of Bacteroides(GB-124) to identify human sources of faecal pollution in atemperate river catchment
James Ebdona,�, Maite Muniesab, Huw Taylora
aEnvironment & Public Health Research Unit, School of the Environment, University of Brighton, Cockcroft Building, Lewes Road,
Brighton BN2 4GJ, UKbDepartment of Microbiology, University of Barcelona, Diagonal 645, 08028 Barcelona, Spain
a r t i c l e i n f o
Article history:
Received 17 May 2006
Received in revised form
8 December 2006
Accepted 12 December 2006
Available online 1 February 2007
Keywords:
Bacteroides
Catchment
Faecal
Phages
Source
nt matter & 2007 Elsevie.2006.12.020
thor. Tel.: +44 1273 642274: [email protected] (J. Ebdo
a b s t r a c t
Recent work has suggested that bacteriophages infecting Bacteroides are a potential tool for
faecal source tracking, but that different host strains may be needed for different
geographic areas. This study used a recently identified strain of Bacteroides (GB-124) to
detect human sources of faecal pollution in a river catchment in southeast England (UK). A
total of 306 river water, municipal wastewater and animal samples were obtained over a 16-
month period. Bacteriophages capable of infecting GB-124 were present in all municipal
wastewaters but were not detected in faecal samples from animals, and were detected at
significantly lower levels (Po 0.001) in river waters directly downstream of a dairy farm.
This last observation was despite the presence of high levels of faecal indicator bacteria at
this site. The study suggests that GB-124 appears to be specific to human faeces. As such it
may represent an effective and low-cost method of faecal source identification.
& 2007 Elsevier Ltd. All rights reserved.
1. Introduction
According to a recent report by the UK Environment Agency,
there is a need for ‘a better understanding of how different
types of pollution move and interact, while passing through
river basins towards the sea’ (Anon, 2005). Contamination of
surface waters by point and non-point sources of faecal
pollution can degrade water quality and impact upon drinking
water supply, fishing, aquaculture and recreational pursuits.
Determining whether contamination is originating from hu-
man or animal sources is therefore essential for estimating
public health risk, facilitating remediation measures and for
resolving legal responsibility for remediation. As a result, novel
faecal source tracking (FST) techniques have been developed,
many of which have been recently reviewed (Sinton et al., 1998;
Simpson et al., 2002; Field, 2004; Meays et al., 2004).
r Ltd. All rights reserved.
; fax: +44 1273 642285.n), [email protected]
A limitation of much of the current research into FST is that
little attention has been focussed on the provision of simple,
low-cost techniques. However, one approach that has shown
promise and that is simple and low cost involves the
detection and enumeration of bacteriophages (viruses) cap-
able of infecting bacteria of the genus Bacteroides (Jofre et al.,
1986; Tartera and Jofre, 1987; Cornax et al., 1990; Armon, 1993;
Puig et al., 1999). According to Haroun and Saheer (2002)
Bacteroides are obligate anaerobic Gram-negative bacteria that
constitute a major proportion of the bacterial flora of the
human intestinal tract.
Unfortunately, the host range of Bacteroides is not restricted
to humans, but interestingly bacteriophages infecting parti-
cular strains of B. fragilis (such as HSP40) appear to be found
almost exclusively in faecal material of human origin (Tartera
and Jofre, 1987; Lucena et al., 1996; Puig et al., 1999). It has
.uk (H. Taylor).
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WAT E R R E S E A R C H 4 1 ( 2 0 0 7 ) 3 6 8 3 – 3 6 9 03684
therefore been possible to use phages of Bacteroides to
distinguish successfully human from non-human sources of
faecal pollution in surface waters (Tartera and Jofre, 1987;
Tartera et al., 1989; Puig et al., 1999). The reason for the
narrow host range of Bacteroides phages is not fully under-
stood, though Tartera et al. (1989) have suggested that one
explanation might be that both phages and host bacteria
might have co-evolved more separately in obligate anaerobes
than in facultative anaerobes. However, research has shown
that phages that are shown to attack a specific host strain of
Bacteroides in one part of the world, are not necessarily
detected in samples of similar origin in other parts of the
world (Kator and Rhodes, 1992; Grabow et al., 1993; Chung et
al., 1998; Puig et al., 1999; Payan et al., 2005). This is likely to be
attributed to regional differences in the human faecal flora.
These findings therefore suggest that different Bacteroides
host strains are needed for FST studies in different catch-
ments or geographic regions.
Recent research by Payan et al. (2005) led to the isolation of
a new and potentially useful Bacteroides strain (GB-124) from a
UK municipal wastewater (MW). Strain GB-124 is most closely
analogous to Bacteroides ovatus and was isolated from the
influent of a sewage treatment works (STW) situated in
southeast England. A detailed account of the method by
which Bacteroides GB-124 was isolated is reported by Payan et
al. (2005). Briefly, dilutions of MW were plated onto Bacteroides
bile aesculine agar (BBE) (Livingston, 1978) and incubated at
36 1C (72 1C) for 44 (72) h under anaerobic conditions
(Anaerogen, Oxoid, UK). Bacterial colonies with a dark halo
were plated for pure culture on BBE and incubated under
aerobic and anaerobic conditions. Gram-negative colonies
growing in anaerobic conditions were grown up in Bacteroides
phage recovery medium broth (BPRM, Scharlau, Spain) at
36 1C (72 1C) for 18 (72) h and exposed to faecal samples of
human and animal origin. Strain GB-124 gave zero or very low
phage counts in samples from pigs, cattle and poultry and
high counts in MW samples.
However, the study only managed to test a very limited
number of samples and no attempt was made to determine
whether GB-124 phages could be detected successfully in UK
surface waters. The work presented herein therefore follows
on from the work of Payan et al. (2005) in that it attempts
to determine whether GB-124 phages are host specific
(i.e., found exclusively in the faeces of humans) and are
present in sufficient numbers to allow their routine detection
in contaminated river waters. If this is the case then GB-124
may potentially be a useful tool for identifying and assessing
the contribution of wastewater discharges, leaking sewers
and leaking septic tanks to river waters in southeast England.
2. Materials and methods
2.1. Study catchment
For this study, a river catchment was selected in southeast
England from which river water samples were collected on at
least a monthly basis from nine water-monitoring sites. The
sites were situated along a 15 km stretch of a tributary of the
River Ouse. The river is situated in the county of East Sussex
and is 67 km in length, draining 396 km2 to its tidal limit. The
tributary catchment includes a range of potential faecal
sources and is largely rural, although the stream passes
through several villages before joining the main river channel.
Whilst agriculture is the dominant land-use, there are over 20
STW discharging partially treated MW into the river system.
In addition to river water samples, and to test the host
specificity of GB-124, 110 MW and 30 pooled samples from the
faeces of livestock, domestic and wild animals were also
obtained from across southeast England.
2.2. River water and faecal samples
A total of 166 river water samples were taken between April
2005 and August 2006. For clarity, river monitoring sites are
referred to on the basis of their proximity to known potential
faecal pollution inputs, e.g., ‘o0.5 km downstream of STW’, or
‘directly downstream of dairy farm’, etc. River water samples
were taken from the centre of the river at a depth of
approximately 30 cm below the surface using sterile poly-
ethylene sampling bottles clamped to an extendible sampling
pole. All river water and animal faecal samples were
transported to the laboratory in the dark at 4 1C, and analysed
within 4 h of sampling. All media and reagents were prepared
in accordance with the manufacturers’ instructions, unless
otherwise stated.
In the case of animal samples, faecal material was obtained
on each occasion from at least 20 animals using sterile swabs
placed into sample bags, or from approximately 500 ml of
liquid run-off from livestock sheds collected in polyethylene
bottles. In the laboratory the faecal material was mixed well
(either using a vortex mixer WhirlimixerTM, or a Seward
stomacher 400, Lab System, UK) with other samples from
the same source to form pooled samples (e.g., cattle, pig, etc.).
For each pooled sample either 1 gramme (wet weight) of
faecal matter or 1 ml of run-off was suspended in 9 ml 14
strength Ringer solution and a decimal dilution series made
before the samples were analysed for the presence of faecal
organisms.
2.3. Municipal wastewater samples
Final effluent from STW was collected by staff of the local
water supply and sewerage company in sterile 1 l polyethy-
lene sampling bottles, kept in the dark at 4 1C and transported
to the University of Brighton for analysis. Samples were
obtained from 29 STW (Table 1). MW samples from northern
England and Denmark were additionally analysed in order to
determine whether the geographical distribution of phages
infecting GB-124 was limited to the southeast of England.
2.4. Detection of faecal organisms
In addition to Bacteroides samples were tested for the
presumptive presence of faecal coliforms (FC), intestinal
enterococci (ENT) and the presence of somatic coliphages.
Somatic coliphages were selected for use within the study as
they appear to offer a good indication of the presence of
faecal contamination in surface waters (Borrego et al., 1987;
Skraber et al., 2002). The results achieved using GB-124 could
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Table 1 – Numbers of GB-124 phages in final effluent from29 Sewage treatment works (n ¼ 110)
Site Populationequivalent(pop. eq.)a
Numbers of phageinfecting GB-
124 Log10 PFU/100 ML
Brighton
Portobello
261,254 4.22–4.38
Eastbourne 119,336 3.76–4.70
Newhaven
East
55,955 2.50–3.27
Goddards
Green
49,824 3.98
Scaynes Hill 37,327 3.77–4.18
Hailsham
South
27,448 2.30–4.26
Vines Cross 23,518 2.95
Uckfield 23,163 3.15–4.04
Crowborough
Redgate
20,700 3.32
Hailsham
North
14,725 2.00–3.00
Ringmer 4805 3.74
Forest Row 4456 2.30–3.63
Barcombe 3533 2.70
Cuckfield 3186 3.78
Wadhurst
Whitegate
2675 2.00–3.00
Crowborough
St John’s
2377 2.00–2.30
Ditchling 1621 2.47–4.30
Maresfield 1542 3.47
Blackboys 1046 2.47
Hartfield 949 2.00–2.60
Kingston 946 2.30–3.32
Alfriston 769 3.07
East Hoathly 761 2.30–3.65
Rodmell 381 2.00–2.84
Poynings 371 2.30–2.84
Ansty 240 2.00
Streat (Golf
course)
28 3.90
Esholt (N.
England)
624,000 3.15
Aalborg
(Denmark)
— 2.70
Total 1,286,936
a Pop. eq supplied by Southern Water (UK), and Yorkshire Water
(UK).
WAT E R R E S E A R C H 41 (2007) 3683– 3690 3685
then be compared with the more established faecal indicator
organisms. Briefly, FC were enumerated by membrane filtra-
tion on 0.45mm pore size membranes, followed by incubation
for 24 h on mFC Agar (Difco, BDMS, UK) at 44.5 1C, in
accordance with standardised methods (Anon, 1990). ENT
were also enumerated on 0.45mm pore size membranes by
membrane filtration followed by incubation on m-Enterococcus
Agar (Difco, BDMS, UK) at 37 1C for 48 h in accordance with
standardised methods (Anon, 1984). Bacterial counts were
expressed as colony-forming units (CFU) per 100 ml of
sample.
2.5. Bacteriophage enumeration
Enumeration of somatic coliphages was carried in accordance
with standardised methods (Anon, 2000) using the host strain
Escherichia coli WG-5, and was based on a double agar plaque
count procedure similar to that described below for Bacter-
oides phage detection (Anon, 2001). Screw-topped glass
tubes (Hach, UK) containing BPRM broth were used to grow
strain GB-124 (1 ml host in 12 ml broth) to the correct
optical density (approx. 0.33 at 620 nm) for phage detection.
Once the correct optical density was reached (usually within
3 h), strain GB-124 was placed on melting ice and used within
4 h. All samples were filtered using 0.22mm polyvinylidene
difluoride (PVDF) membrane syringe filters (Millipore, US) to
remove any background bacterial contamination before
phage detection. These low protein binding membranes have
been shown to retain very low levels of phages (Tartera et al.,
1992).
On each occasion, 1 ml of the filtrate (or dilution thereof)
and 1 ml of host GB-124 were added to a sterile 10 ml
disposable test tube containing 2.5 ml of semi-solid BPRM
agar and mixed gently to avoid bubble formation. The
contents were then poured onto the surface of BPRM agar
and left to set. The plates were inverted and incubated at 36 1C
(72 1C) for 18 (72) h in anaerobic jars containing anaerobic
sachets (Anaerogen, Oxoid, UK). The presence of phages
resulted in the production of visible plaques (zones of lysis) in
a confluent lawn of the host bacterium. All samples (1 ml
volume) were analysed in at least duplicate and expressed as
the mean number of plaque forming units (PFU) per 100 ml of
sample.
3. Results
3.1. Faecal indicator organisms in municipal wastewaterand faecal samples
Levels of phages infecting Bacteroides GB-124 in MW ranged
from 2.0 Log10 PFU/100 ml in final effluent from Hailsham
North, Wadhurst Whitegate, Crowborough (St. John’s), Hart-
field, Rodmell and Ansty STW to 4.70 Log10 PFU/100 ml in final
effluent from Eastbourne STW (Table 1). The mean number of
phages infecting Bacteroides GB-124 (3.92 Log10 PFU/100 ml) in
MW (Table 2) was very similar to that reported for phages
infecting B. fragilis HSP40 (3.73 Log10 PFU/100 ml) (Tartera et al.,
1989; Lucena et al., 1996). Phages were detected in the final
effluent from all STW tested although, unlike the river water
and animal faecal samples, MW samples were not always
analysed on the day of sampling. This was due to the fact
that MW samples were independently gathered and delivered
to the University of Brighton for subsequent analysis. There-
fore, the levels of phages reported may be a slight under-
estimation of the levels present had the samples been
analysed within 4 h of sampling. However, it is unlikely that
this factor would result in a significant reduction in counts as
Puig et al. (1999) have reported good survival of Bacteroides
phages at 4 1C.
Importantly, phages infecting Bacteroides GB-124 were not
detected in any of the 30 non-human samples taken from
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Table 2 – Numbers of phages in samples from different sources (n ¼ 306)
Category (description) (Log10 PFU per 100 ml)
n Bacteroides GB-124 Somatic coliphages
Mean Range + (%) Mean Range + (%)
A (River o0.5 km d/s of STW) 24 3.65 4.30–2.48 100 4.32 4.72–3.78 100
B (River o2.0 km d/s of STW) 23 3.12 3.90–2.00 100 4.08 4.60–3.18 100
C (River 42.0 km d/s STW+farms) 90 2.38 3.63–0 56 3.85 4.81–2.30 100
D (River directly d/s of farm) 25 1.15 2.48–0 12 4.35 4.81–2.78 100
E (River close to origin) 4 oDT — 0 3.08 3.36–0 50
(Municipal wastewater) 110 3.92 4.70–2.00 100 4.61 5.01–3.74 100
(Animal samples) 30 oDT — 0 4.20 4.70–2.00 100
+ (%) ¼ Percentage positive isolates; oDT ¼ Below Detection Threshold (1 PFU per ml), STW ¼ Sewage treatment works.
Table 3 – Numbers of faecal bacteria in samples from different sources (n ¼ 306)
Category (description) (Log10 CFU per 100 ml)
n Faecal coliforms Enterococci
Mean Range + (%) Mean Range + (%)
A (River o0.5 km d/s of STW) 24 4.07 4.86–2.60 100 3.61 4.76–2.30 100
B (River o2.0 km d/s of STW) 23 3.82 4.88–2.30 100 3.74 4.84–2.00 100
C (River 42.0 km d/s STW+farms) 90 3.54 4.99–2.48 100 3.21 5.08–2.00 100
D (River directly d/s of farm) 25 4.54 5.24–3.48 100 4.40 5.08–3.38 100
E (River close to origin) 4 3.43 3.72–1.48 100 3.12 3.13–3.10 100
(Municipal wastewater) 110 7.19 7.98–6.18 100 6.37 7.11–4.97 100
(Animal samples) 30 9.08 6.08–10.24 100 7.92 8.89–5.70 100
+ (%) ¼ Percentage positive isolates; STW ¼ Sewage Treatment Works.
WAT E R R E S E A R C H 4 1 ( 2 0 0 7 ) 3 6 8 3 – 3 6 9 03686
the faeces of cattle, horses, pigs, poultry, rabbits and sheep
(Table 2). This was despite high mean levels of FC and ENT in
these samples (9.08 and 7.92 Log10 CFU/100 ml, respectively)
(Table 3).
3.2. Faecal indicator organisms in river water samples
Microbial load in river water was highly variable as can be
seen in Tables 2 and 3, and Figs. 1–3. Phages infecting GB-124
were present in 100% of samples originating from sampling
points ‘o 0.5 and o 2.0 km downstream of STW’ (mean-
3.39 Log10 PFU/100 ml), but were significantly higher (Student’s
t test; Po 0.01) in those samples taken from the sampling
point ‘o0.5 km downstream of STW’ (mean ¼ 3.65 Log10 PFU/
100 ml). GB-124 phages were also present in 56% of all river
samples originating ‘42.0 km downstream of STW’ (Table 2).
Conversely, GB-124 phages were present at significantly
lower levels (Student’s t-test; Po 0.001) in samples collected
‘directly downstream of a dairy farm’ and were not recovered
in any samples taken ‘close to the river’s origin’ (Table 2 and
Fig. 1). This site is situated on a tributary of the river as it
emerges from an aquifer and is not likely to receive any
appreciable human inputs upstream, though it may be
impacted upon by avian sources and grazing sheep. Interest-
ingly, counts for FC, ENT, and somatic coliphages were
highest in river samples ‘directly downstream of dairy farm’
(mean ¼ 4.54 and 4.40 Log10 CFU/100 ml and 4.35 Log10 PFU/
100 ml, respectively) (Tables 2 and 3). This site is directly
downstream of a bridge over which dairy cattle pass four
times a day for milking. Run-off containing the faeces of
cattle was regularly observed to flow into the stream at this
site (especially after heavy rainfall).
Tables 2 and 3 also show that the mean numbers of somatic
coliphages in river samples ‘o0.5 km downstream from STW’
was twice that of FC, 5 times higher than that of ENT and 5
times higher than that of GB-124 phages. Numbers of somatic
coliphages were found to be consistently higher (several Logs)
than equivalent numbers of GB-124 phages in all sources
tested. These findings are in concordance with the results
reported by other investigators (Tartera and Jofre, 1987;
Tartera et al., 1989; Lucena et al., 1994). Interestingly somatic
coliphages were the most abundant organisms tested for in
river samples impacted by STW and faecal coliforms were the
most abundant of the organisms tested for in river samples
impacted by animal sources. Under current EU legislation
only those river waters designated as ‘inland bathing waters’
are required to meet microbiological water quality standards
(CEC, 1976). However, all river water monitoring sites recorded
ARTICLE IN PRESS
1
10
100
1000
10000
100000
River < 0.5 km
d/sSTW
River < 2.0 km
d/s STW
River > 2.0km
d/s STW
and d/s farms
River directly
d/s farm
Site
Mean
PF
U/1
00M
L
High rainfallLow rainfall
Fig. 2 – Mean numbers of GB-124 phages during both ‘high’ and ‘low’ rainfall in river water samples (n ¼ 166).
1
10
100
1000
10000
100000
River < 0.5 km d/s
STW
River < 2.0 km d/s
STW
River > 2.0km d/s
STW and d/s farms
River directly d/s farm River close to origin
Site
Mean
CF
U a
nd
PF
U/1
00M
LFC
FE
WG5
GB124
Fig. 1 – Mean faecal organism numbers in river water samples (n ¼ 166). FC ¼ faecal coliforms; FE ¼ faecal enterococci; WG-
5 ¼ somatic coliphage; GB-124 ¼ Bacteroides.
WAT E R R E S E A R C H 41 (2007) 3683– 3690 3687
numbers of faecal coliforms and intestinal enterococci, well
in excess of these standards, particularly the sites down-
stream of dairy farm and STW.
The numbers of GB-124 phages in samples ‘o 0.5 km
downstream of STW’ were similar to those of B. fragilis
phages found in Spanish rivers contaminated with human
ARTICLE IN PRESS
1
10
100
1000
10000
100000
River < 0.5 km
d/s STW
River < 2.0 km
d/s STW
River > 2.0km
d/s STW
and d/s farms
River directly
d/s farm
River close
to origin
Site
Mean
PF
U/1
00M
L
High rainfall
Low rainfall
Fig. 3 – Mean numbers of somatic coliphages during both ‘high’ and ‘low’ rainfall in river water samples (n ¼ 166).
WAT E R R E S E A R C H 4 1 ( 2 0 0 7 ) 3 6 8 3 – 3 6 9 03688
sewage (Lucena et al., 1996). Figs. 1 and 2 show a reduction in
the mean numbers of GB-124 phages and somatic coliphages
(with respect to distance downstream of STW), suggesting
that MW is a major input of faecal organisms at these points
on the river, under the flow conditions investigated.
3.3. ‘High’ and ‘low’ rainfall
In order to evaluate the effect of rainfall on the numbers of
GB-124 phages present in river waters, the sampling occa-
sions were retrospectively divided into ‘high’ and ‘low’
rainfall. An arbitrary ‘high/low’ rainfall level was then
established based on the combined 12 and 24 h antecedent
rainfall values (measured at four weather stations within the
catchment). According to this method, approximately a third
of the sampling occasions could be regarded as ‘high’ rainfall
events (410 mm per day), and two-thirds as ‘low’ rainfall
events (p10 mm per day). Rainfall data (not shown) was
supplied by the UK Environment Agency (Pers. Comm., 2006).
As expected, mean levels of all the target organisms
increased during ‘high’ rainfall events, typically by a factor
of approximately 1.0 Log10 (for FC and ENT) and 0.5 Log10 (for
somatic coliphages and GB-124 phages), compared with the
mean ‘low’ rainfall values. The highest levels of FC and ENT
(5.24 and 5.08 Log10 CFU/100 ml, respectively) and somatic
coliphages and GB-124 phages (4.81 and 4.30 Log10 PFU/100 ml,
respectively) were recorded on the 25 and 27 July, 2005 and
coincided with the highest antecedent rainfall figs
(13.9–23.7 mm) (Tables 2 and 3). The mean number of phages
infecting GB-124 present in river samples ‘o0.5 km down-
stream of STW’ varied from 3.37 (Log10)PFU/100 ml during
‘low’ rainfall, to 3.89 (Log 10) PFU/100 ml during ‘high’ rainfall
conditions (Fig. 2). The levels of GB-124 phages present in
river samples ‘o0.5 km downstream from STW’ were greater
during ‘high’ rainfall conditions than those found at the same
site during ‘low’ rainfall conditions (Student’s t-test; Po0.05).
The number of phages infecting strain GB-124 at each of the
sites ‘40.5 km downstream of the STW’ did not vary
significantly between ‘low’ and ‘high’ rainfall events (Fig. 2).
Fig. 2 shows that GB-124 phages were not detected at the site
‘directly downstream of the dairy farm’ during ‘low’ rainfall
conditions and were only detected in very low numbers at
this site (Po0.001) during ‘high’ rainfall conditions.
Fig. 3 shows that the number of somatic coliphages
detected in samples ‘directly downstream of the dairy farm’
and samples ‘o2.0 km downstream of STW’ both differ
significantly between ‘high’ and ‘low’ rainfall conditions.
The highest numbers of somatic coliphages (4.81 and
4.72 Log10 PFU/100 ml) were observed in samples ‘directly
downstream of the dairy farm’ and samples ‘o 0.5 km
downstream of STW’, respectively, during ‘high’ rainfall
conditions (Table 2). Most importantly, phages infecting strain
GB-124 appeared to be present in sufficiently high numbers
during both ‘high’ and ‘low’ rainfall conditions, to allow their
direct detection in 1 ml of river water.
4. Discussion
Our data shows that the relative numbers of faecal indicator
organisms appear to differ between municipal wastewaters,
runoff from animals and river waters impacted by both these
sources. For instance, the number of FC exceeded the number
of somatic coliphages in MW, animal faeces and at sites
directly downstream of farms but was lower than the number
of somatic coliphages in river waters downstream of STW.
ARTICLE IN PRESS
WAT E R R E S E A R C H 41 (2007) 3683– 3690 3689
A similar pattern was observed by Bell (1976), Borrego et al.
(1987) and Skraber et al. (2002). It has been demonstrated that
differences in water temperature, levels of predation, adsorp-
tion to sediments and the effects of UV irradiation can
all influence the survival of faecal organisms in aquatic
environments (Mancini, 1978; Fujioka et al., 1981; Wilkinson
et al., 1995).
Whilst numbers of faecal indicator bacteria were signifi-
cantly lower in 100 ml of river water than those found in MW
and animal faeces (per 100 ml or 100 g), phages were present
in contaminated river waters at similar numbers to those
found in untreated MW and animal faeces. This would
suggest that phages are more resilient to inactivation
processes than traditional bacterial indicators and the
observation is in agreement with the data of Duran et al.
(2002). Phages may also be released during destruction of the
host cells during wastewater treatment. Ewart and Paynter
(1980) found that phage numbers were consistently higher in
reactor effluent and mixed liquor compared with inflowing
sewage. Duran et al. (2002) showed that somatic coliphages
and phages infecting B. fragilis are capable of surviving for
significantly longer periods in river waters than are faecal
coliforms and intestinal enterococci. However, research by
Bradley et al. (1999) also suggests that it is possible that
somatic coliphages are able to attack E. coli host strains and be
subsequently released outside of the gastrointestinal tract.
Conversely, Tartera et al. (1989), demonstrated that B. fragilis
phages can only replicate in metabolically active host cells
and therefore replication of the phages in the environment is
highly unlikely. Bacteriophages of Bacteroides spp. may there-
fore provide useful information on longer-term pollution.
The host specificity of Bacteroides GB-124 phages and the
high numbers of somatic coliphages present in river waters
impacted by MW also support previous research findings
(Tartera et al., 1989; Payment et al., 1991; Skraber et al., 2002),
which suggest that phages may offer a better indication of the
presence of enteric viruses than current bacterial indicators.
However, further research is necessary in order to determine
both the relationship between GB-124 phages and human
enteric viruses and the numbers of GB-124 excreted by
individual humans. The presence of GB-124 phages in the
final effluent from all the STW (including those with
population equivalents as low as 28) suggests that a
significant proportion of the human population in the study
area is excreting these phages. A previous study of 600
healthy adults found that 34% of them were positive for
somatic coliphages (Furuse, 1987).
This study has provided useful information on the numbers
and distribution of phages infecting strains GB-124 and
somatic coliphages found in UK river waters, MW and animal
faeces. It should be noted that Bacteroides strain GB-124 used
in this study also produced less turbid plaques than other
Bacteroides host strains used in previous UK FST investigations
(Blanch et al., 2006), making it quicker and easier to interpret
the results. Interestingly, phages infecting GB-124 were
detected in two MW samples from the north of England and
from Denmark, and more recently the authors have also
detected phages to GB-124 in MW from Spain, Sicily and
Uganda (unpublished data). Further work is currently under-
way to determine whether GB-124 can distinguish human and
non-human sources of faecal pollution in other parts of the
world as successfully as it has in this study.
The Bacteroides (GB-124) phage assay is also being used in an
extended study of the same catchment in which additional
water quality parameters, and meteorological and geographi-
cal data will be included in a GIS. The aim of the extended
project is to produce a model to predict the impact of human
and animal faeces on a river catchment under a range of
meteorological conditions. It is anticipated that this informa-
tion will help to predict faecal inputs thereby allowing more
effective sampling of river catchments and coastal waters in
the future.
5. Conclusions
1.
High levels of GB-124 phages within MW and river samplesimpacted by partially treated MW, and their absence in
animal faeces suggests that GB-124 may be used as a
marker of human pollution.
2.
The technique is low-cost, rapid (requiring no sampleconcentration) and is database (or ‘library’) independent.
3.
Initial results suggest that it may also be possible to useGB-124 to determine successfully sources of faecal pollu-
tion in other parts of the world, although further research
is necessary.
4.
In addition to surface waters, GB-124 could also be used toidentify and assess sources of faecal pollution present in
groundwater, shellfish, soil, and sediments.
5.
As such GB-124 could assist in the management of micro-bial water quality through the identification and remedia-
tion of point and diffuse sources of faecal pollution.
Acknowledgements
This study was supported by the EU INTERREG IIIA Regional
Development Fund (162/025/263) ‘‘Advanced Monitoring and
Control of Microbial Water Quality (AMACOM)’’. The authors
would like to acknowledge the cooperation of Southern Water
Scientific Services, the Sussex Ouse Conservation Society
(SOCS) and the UK Environment Agency (Southern Region).
Thanks are also expressed to Professor Joan Jofre of the
University of Barcelona for his support and advice and to
Søren Bastholm of Aalborg University (Denmark), for the
provision of municipal wastewater samples.
R E F E R E N C E S
Anon, 1984. ISO 7899/2. Water Quality—Enumeration of FaecalEnterococci by Membrane Filtration. International Organisa-tion for Standardisation, Geneva, Switzerland.
Anon, 1990. ISO 9308/1. Water Quality-Detection and Enumera-tion of Coliform Organisms, Thermotolerant Coliform Organ-isms and Presumptive E. coli. International Organisation forStandardisation, Geneva, Switzerland.
Anon, 2000. ISO 10705-2. Water Quality. Detection and Enumera-tion of Bacteriophages—Part 2: Enumeration of SomaticColiphages. International Organisation for Standardisation,Geneva, Switzerland.
ARTICLE IN PRESS
WAT E R R E S E A R C H 4 1 ( 2 0 0 7 ) 3 6 8 3 – 3 6 9 03690
Anon, 2001. ISO 10705-4. Water Quality. Detection and Enumera-tion of Bacteriophages—Part 4: Enumeration of BacteriophagesInfecting Bacteroides Fragilis. International Organisation forStandardisation, Geneva, Switzerland.
Anon, 2005. UK Environment Agency ‘Water for life and liveli-hoods’—key principles, Water Framework Directive.
Armon, R., 1993. Bacteriophage monitoring in drinking water: dothey fulfil the index or indicator function. Water Sci. Technol.27, 463–467.
Blanch, A., Belanche-Munoz, L., Bonjoch, X., Ebdon, J., Gantzer, C.,Lucena, F., Ottoson, J., Kourtis, C., Iversen, A., Kuhn, I., Moce,L., Muniesa, M., Schwartzbrod, J., Skraber, S., Papageorgiou, G.,Taylor, H., Wallis, J., Jofre, J., 2006. Integrated analysis ofestablished and novel microbial and chemical methods formicrobial source tracking. Appl. Environ. Microbiol. 72 (9),5915–5926.
Borrego, J.J., Morinigo, M.A., De Vicente, A., Cornax, R., Romero, P.,1987. Coliphages as an indicator of faecal pollution in water:its relationship with indicator and pathogenic microorgan-isms. Water Res. 21, 1473–1480.
Bradley, G., Carter, J., Gaudie, D., King, C., 1999. Distribution of thehuman faecal bacterium Bacteroides fragilis, its bacteriophagesand their relationship to current sewage pollution indicatorsin bathing water. J. Appl. Microbiol. Symp. Suppl. 85, 90S–100S.
CEC, 1976. [a]. Council Directive of 8 December 1975 concerningthe quality of bathing water (76/160/EEC). Official Journal ofthe European Communities, L31/1 (5 February 1976).
Chung, H., Jaykus, L.A., Lovelance, G., Sobsey, M.D., 1998.Bacteriophages and bacteria as indicators of enteric virusesin oysters and their harvest waters. Water Sci. Technol. 38,37–44.
Cornax, R., Morinigo, M.A., Paez, I.G., Munoz, M.A., Borrego, 1990.Application of direct plaque assay for detection and enu-meration of bacteriophages of Bacteroides fragilis from con-taminated water samples. Appl. Environ. Microbiol. 56,3170–3173.
Duran, A.E., Muniesa, M., Mendez, X., Valero, F., Lucerna, F., Jofre,J., 2002. Removal and inactivation of indicator bacteriophagesin fresh waters. J. Appl. Microbiol. 92, 338–347.
Ewart, D.L., Paynter, M.J.B., 1980. Enumeration of bacteriophagesand host bacteria in sewage and the activated-sludge treat-ment process. Appl. Environ. Microbiol. 39 (3), 576–583.
Field, K.G., 2004. Faecal source identification. In: WHO. Ed.Cotruvo, J.A., Dufour, A., Rees, G. Bartram, J., Carr, R., Cliver,D.O., Craun, G.F., Fayer, R., Gannon, V.P.J. (Eds.), WaterborneZoonoses: Identification, Causes and Control. IWA, London.
Fujioka, R.S., Hashimoto, H.H., Siwak, E.B., Young, R.H.F., 1981.Effect of sunlight on the survival of indicator bacteria inseawater. Appl. Environ. Microbiol. 41, 1083–1087.
Furuse, K., 1987. Distribution of coliphages in the generalenvironment: general considerations. In: Goyal, S.M., Gerba,C., Bitton, G. (Eds.), Phage Ecology. Wiley, New York, pp. 87–124.
Grabow, W.O.K., Holtzhausen, C.S., de Villiers, J.C., 1993. Researchon bacteriophages as indicators of water quality. WRC reportno. 321/1/93. Water Research Commission, Pretoria, SouthAfrica.
Haroun, N.S., Saheer, E.G., 2002. Bacteroides. In: Robertson, S.(Ed.), Encyclopaedia of Life Sciences, vol. 3. Macmillan Pub-lishers Ltd., Nature Publishing Group, p. 46.
Jofre, J., Bosch, A., Lucerna, F., Girones, R., Tartera, C., 1986.Evaluation of Bacteroides fragilis bacteriophages as indicators of
the virological quality of water. Water Sci. Technol. 18,167–173.
Kator, H., Rhodes, M., 1992. Evaluation of Bacteroides fragilisbacteriophage, a candidate human-specific indicator of fecalcontamination for shellfish-growing waters. Final Report.Virginia Institute of Marine Sciences, College of William andMary, Gloucester Point, Vancouver, Canada.
Livingston, S.J., 1978. New medium for selection and presumptiveidentification of the Bacteroides fragilis group. J. Clin. Microbiol.7, 448–453.
Lucena, F., Lasobras, J., McIntosh, D., Forcadell, M., Jofre, J., 1994.Effect of distance from the polluting focus on relativeconcentrations of Bacteroides fragilis phages and coliphages inmussels. Appl. Environ. Microbiol. 60 (7), 2272–2277.
Lucena, F., Araujo, R., Jofre, J., 1996. Usefulness of bacteriophagesinfecting Bacteroides fragilis as index microorganisms of remotefaecal pollution. Water Res. 30 (11), 2812–2816.
Mancini, J.J., 1978. Numerical estimates of coliform mortalityrates under various conditions. J. Water Pollut. Control Fed. 50,2477–2484.
Meays, C.L., Broersma, K., Nordin, R., Mazumder, A., 2004. Sourcetracking faecal bacteria in water: a critical review of currentmethods. J. Environ. Manage. 73, 71–79.
Payan, A., Ebdon, J.E., Taylor, H., Gantzer, C., Ottoson, J.,Papageorgiou, G., Blanch, A.R., Lucena, F., Jofre, J., Muniesa,M., 2005. A method for the isolation of suitable bacteriophagehost strains of Bacteroides for tracking sources of faecalpollution in water. Appl. Environ. Microbiol. 71 (9), 5659–5662.
Payment, P., Richardson, L., Edwardes, M., Franco, E., Siemiatycki,J., 1991. A prospective epidemiological study of drinking waterrelated gastrointestinal illnesses. Water Sci. Technol. 24,27–28.
Personal communication, 2006. A. Howe, Environment Agency(Southern Region), Guildbourne House, Worthing, West Sus-sex, UK.
Puig, A., Queralt, N., Jofre, J., Araujo, R., 1999. Diversity ofBacteroides fragilis strains in their capacity to recover phagesfrom human and animal wastes and from faecally pollutedwastewater. Appl. Environ. Microbiol. 65, 1172–1176.
Simpson, J.M., Santo Domingo, J.W., Reasoner, D.J., 2002. Microbialsource tracking: state of the science. Environ. Sci. Technol. 36(24), 5279–5288.
Sinton, L.W., Finlay, R.K., Hannah, D.J., 1998. Distinguishinghuman from animal contamination in water: a review. NZ J.Mar. Freshwater Res. 32, 323–348.
Skraber, S., Gantzer, C., Maul, L., Schwartzbrod, L., 2002. Fates ofbacteriophages and bacterial indicators in the Moselle river(France). Water Res. 36, 3629–3637.
Tartera, C., Jofre, J., 1987. Bacteriophages active against Bacteroidesfragilis in sewage polluted waters. Appl. Environ. Microbiol. 53,1632–1637.
Tartera, C., Lucerna, F., Jofre, J., 1989. Human origin of Bacteroidesfragilis bacteriophages present in the environment. Appl.Environ. Microbiol. 55, 2696–2701.
Tartera, C., Araujo, R., Michel, T., Jofre, J., 1992. Culture anddecontaminating methods affecting enumeration of phagesinfecting Bacteroides fragilis in sewage. Appl. Environ. Micro-biol. 58, 2670–2673.
Wilkinson, J., Jenkins, A., Wyer, M., Kay, D., 1995. Modelling faecalcoliform dynamics in streams and rivers. Water Res 29,847–855.