Cellular Distribution and Functions of P2 Receptor Subtypes ...
FGFR2 mutations are rare across histologic subtypes of ovarian cancer
Transcript of FGFR2 mutations are rare across histologic subtypes of ovarian cancer
This is the author’s version of a work that was submitted/accepted for pub-lication in the following source:
Byron, Sara, Gartside, Michael, Wellens, Candice, Goodfellow, Paul, Bir-rer, Michael, Campbell, Ian, & Pollock, Pamela (2010) FGFR2 mutationsare rare across histologic subtypes of ovarian cancer. Gynecologic Oncol-ogy, 117 (1), pp. 125-129.
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NOTICE: this is the author’s version of a work that was accepted for pub-lication in Gynecologic Oncology. Changes resulting from the publishingprocess, such as peer review, editing, corrections, structural formatting,and other quality control mechanisms may not be reflected in this docu-ment. Changes may have been made to this work since it was submittedfor publication. A definitive version was subsequently published in Gyneco-logic Oncology, [VOL 117, ISSUE 1, (2010)] 10.1016/j.ygyno.2009.12.002
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FGFR2 Mutations are Rare Across Histologic Subtypes of Ovarian Cancer 1
2
Sara A. Byron1, Michael G. Gartside1, Candice L. Wellens1, Paul J. Goodfellow2, 3
Michael J. Birrer3,4, Ian G. Campbell5,6, Pamela M. Pollock1* 4
5
1Cancer and Cell Biology Division 6
Translational Genomics Research Institute 7
Phoenix, Arizona 85004 8
2 Siteman Cancer Center 9
Washington University School of Medicine/Barnes-Jewish Hospital 10
St. Louis, Missouri 63110 11
3 Cell and Cancer Biology Department 12
Center for Cancer Research 13
National Cancer Institute 14
Bethesda, MD 20892 15
4 Present address: 16
Department of Medicine 17
Massachusetts General Hospital 18
Dana-Farber/Harvard Cancer Center 19
Boston, MA 02114 20
5 Victorian Breast Cancer Research Consortium 21
Cancer Genetics Laboratory 22
Peter MacCallum Cancer Centre 23
2
East Melbourne, Victoria, Australia 24
6 Department of Pathology 25
The University of Melbourne 26
Melbourne, Victoria, Australia 27
28
*Corresponding Author 29
445 North 5th Street 30
Phoenix, AZ 85004 31
Phone: 602-343-8815 32
Fax: 602-343-8840 33
e-mail: [email protected] 34
35
Sources of Support: Department of Defense CDMRP Ovarian Cancer Research Program 36
(W81XWH-08-1-0244, PMP), National Health and Medical Research Council (Australia) (IGC), 37
the Victorian Breast Cancer Research Consortium (Australia) (IGC), American Cancer Society 38
(PF-07-215-01-TBE, SAB). 39
40
Running Title: FGFR2 Mutations in Ovarian Cancer 41
Key Words: Ovarian Carcinoma, FGFR2, Mutation 42
43
44
45
46
47
3
ABSTRACT 48
Objective: Ovarian cancer is the leading cause of death from gynecologic malignancies in the 49
Western world. Fibroblast growth factor receptor (FGFR) signaling has been implicated to play 50
a role in ovarian tumorigenesis. Mutational activation of one member of this receptor family, 51
FGFR2, is a frequent event in endometrioid endometrial cancer. Given the similarities in the 52
histologic and molecular genetics of ovarian and endometrial cancers, we hypothesized that 53
activating FGFR2 mutations may occur in a subset of endometrioid ovarian tumors, and possibly 54
other histotypes. 55
Methods: Six FGFR2 exons were sequenced in 120 primary ovarian tumors representing the 56
major histologic subtypes. 57
Results: FGFR2 mutation was detected at low frequency in endometrioid (1/46, 2.2%) and 58
serous (1/41, 2.4%) ovarian cancer. No mutations were detected in clear cell, mucinous, or 59
mixed histology tumors or in the ovarian cancer cell lines tested. Functional characterization of 60
the FGFR2 mutations confirmed that the mutations detected in ovarian cancer result in receptor 61
activation. 62
Conclusions: Despite the low incidence of FGFR2 mutations in ovarian cancer, the two FGFR2 63
mutations identified in ovarian tumors (S252W, Y376C) overlap with the oncogenic mutations 64
previously identified in endometrial tumors, suggesting activated FGFR2 may contribute to 65
ovarian cancer pathogenesis in a small subset of ovarian tumors. Despite 66
the low incidence of FGFR2 mutations in ovarian cancer, anti-FGFR therapies may prove useful 67
in the small subset of patients whose tumors have activating FGFR2 mutations. 68
69
INTRODUCTION 70
4
The late stage of diagnosis, resistance to chemotherapy, and biologic heterogeneity of 71
ovarian cancer make it a clinically challenging disease, with an overall 5-year survival rate of 72
only 46% [1]. The four most common histological subtypes of ovarian cancer are serous (80-73
85%), endometrioid (10%), clear cell (5%), and mucinous (3%) [2]. The histomorphologic 74
heterogeneity of ovarian cancers speaks to distinct etiologies and this is supported by the 75
presence of different underlying genetic alterations. For example, TP53 mutations are most 76
common in serous and high-grade endometrioid ovarian carcinomas [3], whereas PTEN, 77
PIK3CA, and CTNNB1(-catenin) mutations are more common in low-grade endometrioid 78
ovarian cancer [4-6]. Despite histomorphologic and underlying genetic differences, most 79
advanced ovarian carcinomas are treated similarly with a standard approach of surgical 80
cytoreduction followed by carboplatin and paclitaxel combination chemotherapy [7, 8]. 81
Fibroblast growth factor (FGF) signaling has been previously implicated in ovarian 82
tumorigenesis. The fibroblast growth factor family includes 18 ligands (FGF1-FGF10 and 83
FGF16-FGF23) which signal through four transmembrane receptor tyrosine kinases (FGFR1-84
FGFR4) and their alternatively spliced isoforms [9]. Alternative splicing of the exons that 85
encode the third immunoglobulin domain of the receptors is the primary determinant of 86
specificity in FGF/FGFR binding and signaling. These splicing events are highly tissue specific 87
and give rise to the “b” and “c” receptor isoforms for FGFR1-FGFR3, which possess distinct 88
ligand specificities [9, 10]. For FGFR2, cells of an epithelial lineage typically only express the 89
“b” isoform (FGFR2b encoded by exon 8) while mesenchymally derived cells only express the 90
“c” isoform (FGFR2c utilizing exon 9). 91
Ovarian carcinomas are thought to arise from cells of the ovarian surface epithelium 92
(OSE), a layer of poorly committed mesodermally derived epithelial cells surrounding the ovary. 93
5
During the process of malignant transformation, OSE cells become more committed to an 94
epithelial phenotype, acquiring expression of epithelial-specific markers such as E-cadherin and 95
CA125 [11]. Normal ovarian surface epithelial cells have been reported to lack the epithelial 96
FGFR2b isoform and instead express the mesenchymal FGFR2c isoform. The expression of the 97
FGFR2c isoform makes OSE unlike most other epithelial cell types and may reflect the 98
pluripotent nature of the OSE [12, 13]. Interestingly, most epithelial ovarian cancers express 99
FGFR2b [14], consistent with the increased epithelial differentiation of this tumor type during 100
malignant transformation. 101
In the NCI-60 cancer cell line panel [15], the ovarian cancer cell lines are unique with an 102
almost universal expression of all four FGFRs (FGFR1-FGFR4) and the highest incidence of 103
detectable expression of FGFR2 mRNA [16]. FGF-stimulated activation of FGFR in epithelial 104
ovarian cancer cell lines contributes to multiple aspects of the malignant phenotype, including 105
proliferation, motility, cell survival, and reorganization of the actin cytoskeleton [13]. In vivo, 106
mRNA and proteins levels of FGF1 (the universal FGF ligand) are associated with poorer overall 107
survival in patients with high-grade advanced stage serous ovarian tumors [17]. FGF9 is also 108
implicated as playing a key role in ovarian endometrioid adenocarcinomas carrying defects in the 109
Wnt/-catenin pathway [18]. 110
Activating mutations in FGFR2 have been reported in a variety of cancer types, including 111
ovarian carcinoma [19]. As part of the Cancer Genome Project, 26 ovarian tumors were screened 112
for mutations in FGFR1-4 [20]. A single mutation in FGFR2, G272V, was identified in a serous 113
ovarian tumor (1 out of 20 serous ovarian tumors screened for an estimated 5% mutation rate). 114
No mutations were identified in endometrioid, clear cell or mucinous ovarian tumors, although 115
6
only small numbers of these tumor subtypes were evaluated. No mutations were detected in 116
FGFR1, FGFR3, or FGFR4 in the 26 tumors investigated. 117
We and others recently identified activating mutations in FGFR2 in endometrial cancer, 118
primarily in the endometrioid histologic subtype [21, 22]. Interestingly, ovarian cancer and 119
endometrial cancer display similarities both histologically and at the molecular genetics level. 120
Endometrioid ovarian carcinoma bears close histological resemblance to endometrioid 121
carcinoma of the endometrium. Endometrioid cancers of the ovary and endometrium share 122
mutations in PTEN, PIK3CA, and CTNNB1 (-catenin) [4-6, 23-25]. 123
Previous reports implicating FGF signaling in ovarian tumorigenesis coupled with the 124
fact endometrioid ovarian cancer and endometrioid endometrial cancer share a number of cancer 125
associated molecular lesions led us to hypothesize that FGFR2 mutations similar to those seen in 126
endometrial cancers may occur in a subset of ovarian neoplasms. 127
128
MATERIALS AND METHODS 129
Clinical specimens and cell lines 130
120 fresh frozen ovarian tumor samples from multiple institutions were investigated, including 131
46 endometrioid, 41 serous, 14 mucinous, 12 clear cell, and 7 mixed histology ovarian tumors. 132
Ovarian tumor samples were obtained from Ian Campbell at the Peter MacCallum Cancer 133
Institute (26 endometrioid, 32 serous, 10 mucinous, 5 clear cell, and 3 mixed histology ovarian 134
tumors), Michael Birrer at the National Cancer Institute (5 endometrioid, 9 serous, 4 mucinous, 7 135
clear cell, and 4 mixed histology), and Paul Goodfellow at Washington University (15 136
endometrioid tumors). The majority of specimens used in this study contained >70% tumor 137
epithelial cells, as determined by H&E staining of multiple sections. For a subset of tumors 138
7
microdissection of frozen sections was required to enrich for neoplastic cells. All samples were 139
deidentified and the study approved by the Western Institutional Review Board (WIRB). 140
Ovarian tumor DNA provided by Dr Ian Campbell underwent whole genome amplification 141
(WGA) using the Repli-G Phi-mediated amplification system (Qiagen, Hilden, Germany), as 142
previously described [26]. Six ovarian cancer cell lines (CAOV3, ES-2, OVCAR-3, SKOV3, 143
SWS-26, TOV-21G) were also sequenced for FGFR2 mutations. 144
145
Detection of FGFR2 mutations 146
Ovarian tumor samples were screened for FGFR2 mutations in exons 7, 8, 9, 10, 13, and 15, as 147
previously described [21]. Primers pairs were designed to amplify from intronic sequences 148
flanking the target exon to include splice sites and the regions proximal to exon 9 previously 149
associated with disrupted FGFR2 splicing due to Alu insertion [27, 28]. All sequencing was 150
performed at the Translational Genomics Research Institute Sequencing Core. 151
152
BaF3 proliferation assays 153
The S252W and Y376C mutations were introduced to the pEF1.FGFR2b.IRES.neo plasmid 154
(NM_022970.3) using the Quikchange XL Site Directed Mutagenesis Kit (Stratagene) according 155
to manufacturer’s instructions. Mutagenesis primers were designed to introduce a missense 156
mutation to encode for the desired mutation in FGFR2 (indicated in bold) and a silent mutation 157
for diagnostic restriction digestion screening of clones (indicated by underline). Site-directed 158
mutagenesis primer sequences were as follows: FGFR2 S252W Forward: 5’-159
GTTGTGGAGCGCTGGCCTCACCGGCC-3’; FGFR2 S252W Reverse: 5’-160
GGCCGGTGAGGCCAGCGCTCCACAAC-3’; FGFR2 Y376C Forward: 5’–161
8
GATTACAGCTTCCCCAGACTGCCTCGAGATAGCCAT-3’; FGFR2 Y376C Reverse: 5’–162
ATGGCTATCTCGAGGCAGTCTGGGGAAGCTGTAATC-3’. After restriction enzyme 163
screening, the entire FGFR2 coding region was sequenced to confirm the presence of the 164
mutation of interest and to ensure that no other mutations were introduced during the 165
mutagenesis process. 166
The IL-3 dependent murine pro B BaF3 cell line was transduced with empty vector, 167
wildtype FGFR2b and mutant FGFR2b using Amaxa nucleofection, according to the 168
manufacturer’s instructions. Transduced cells were stably selected with 1.2 mg/mL Geneticin 169
in the presence of 5 ng/ml IL-3 for 14 days, and then maintained under selection in RPMI 170
supplemented with 10% FBS, 50 nM beta-mercaptoethanol, 100 U/mL penicillin, 100 g/mL 171
streptomycin sulfate, 1.2 mg/mL Geneticin and 5 ng/mL murine IL-3 (R&D Systems). For the 172
proliferation assays, cells were washed in PBS to remove IL-3, and plated at 1 x 104 cells per 173
well in triplicate in a 96 well plate in IL-3 free media containing 1 nM FGF7 and 5 g/mL 174
heparin. Cells had a 50% volume media change on day 3 to provide fresh FGF ligand. On day 175
five, bioluminescent measurement of ATP was assessed as an indicator of cell number using the 176
ViaLight Plus Cell Proliferation/Cytotoxity Kit (Lonza Rockland, Inc.), according to the 177
manufacturer’s instructions. Experiments were performed twice in each of two independent sets 178
of stable cell lines, with triplicate wells measured for each assay. 179
180
RESULTS AND DISCUSSION 181
To characterize the spectrum and frequency of FGFR2 mutations across the histological 182
subtypes of ovarian cancer, 120 ovarian tumors, including 46 endometrioid, 41 serous, 14 183
mucinous, 12 clear cell, and 7 mixed histology ovarian tumors, were screened for mutations in 184
9
FGFR2. Direct sequencing was undertaken for exons 7, 8, 9, 10, 13, and 15. These six exons 185
include >95% of mutations identified in endometrial cancers ([22] and our unpublished results). 186
Furthermore, the majority of germline mutations in the FGFR gene family associated with 187
skeletal and craniosynostosis syndromes occur within these exons. Alternative splicing of 188
FGFR2 exon 8 and exon 9 occurs in a tissue specific fashion, where cells of an epithelial lineage 189
usually only express the ‘b’ isoform encoded by exon 8 (FGFR2b) and mesenchymally derived 190
cells only express the ‘c’ isoform utilizing exon 9 (FGFR2c). The distinct ligand specificities of 191
these receptor isoforms, coupled with tissue-specific ligand expression, mediate normal paracrine 192
epithelial-mesenchymal signaling. Although no activating mutations in exon 8 have been 193
identified in endometrial cancer to date, a large number of activating mutations in exon 9 of 194
FGFR2 in craniosynostosis and skeletal dysplasia syndromes have been identified. Given that 195
normal ovarian surface epithelium express FGFR2c (utilizing exon 9) and a majority of ovarian 196
carcinomas express FGFR2b (utilizing exon 8) [11-13], we screened both exon 8 and exon 9 for 197
mutations. 198
Mutations in FGFR2 were identified in 1/46 (2.2%) endometrioid and 1/41 (2.4%) serous 199
ovarian tumors. Sequencing revealed the normal DNA was wildtype confirming the mutations 200
were somatic in origin. No mutations were seen in mucinous, clear cell, or mixed histology 201
ovarian tumors. In addition, no mutations were detected in FGFR2 in the six ovarian cancer cell 202
lines tested (CAOV3, ES-2, OVCAR-3, SKOV3, SWS-26, TOV-21G). 203
Both of the mutations identified in ovarian tumor samples have been previously reported 204
in endometrial cancer [21]. S252W, the most common mutation observed in endometrioid 205
endometrial cancer [21], was identified here in a grade 2, stage III, endometrioid ovarian tumor 206
and the Y376C mutation was identified in a grade 3, stage III, serous ovarian tumor. A novel 207
10
G272V mutation in FGFR2 has been previously reported in a single serous ovarian tumor [20]. 208
The functional consequence of this mutation is unknown. However, the absence of the G272V 209
mutation in our cohort suggests that this is not a hotspot mutation for FGFR2. Furthermore, in 210
contrast to the known causative role for S252W and Y376C mutations in FGFR2 in Apert and 211
Beare-Stevenson syndromes, respectively (reviewed in [29]), the absence of the G272V mutation 212
in the germline in FGFR2 mutation driven skeletal disorders (Apert, Crouzon, Pfeiffer, Beare-213
Stevenson, Jackson-Weiss syndromes) suggests it may be a passenger mutation, though 214
ultimately this needs to be functionally validated. Altered splicing of FGFR2 due to Alu 215
insertions has been described as an alternative mechanism of FGFR2 activation in a small subset 216
of patients with Apert syndrome [27, 28], however similar alterations were not identified in any 217
of the ovarian tumors analyzed. 218
S252W is located in the highly conserved linker region between the second and third 219
immunoglobulin-like domains in the extracellular domain of the receptor. Extensive structural 220
and biological studies evaluating the causative role of the S252W mutation in the 221
craniosynostosis and limb pathologies of Apert syndrome have shown that the mutation results in 222
activation of the FGFR2b and FGFR2c receptors by two mechanisms. First, the mutation 223
increases the binding affinity of the receptor isoforms for their cognate ligands. The S252W 224
mutant receptor also violates ligand binding specificity: e.g. the “c” isoform can now bind “b” 225
isoform specific ligands, resulting in autocrine receptor activation [30-32]. Normal ovarian 226
surface epithelial cells are unique in that they are the only epithelial tissue identified to date that 227
express FGFR2c and FGF7, members of the FGF signaling family that are typically expressed in 228
mesenchymally derived tissues [33]. Interestingly, the majority of ovarian carcinomas express 229
FGFR2b, and FGF7 has been shown to stimulate DNA synthesis in ovarian cancer cell lines 230
11
expressing FGFR2b, suggesting the establishment of an autocrine loop [14]. Whether these cells 231
have maintained expression of FGFR2c or have undergone an isoform switch from FGFR2c to 232
FGFR2b is currently unknown. Functional studies have shown that a neutralizing antibody to 233
FGF7 can partially inhibit DNA synthesis in the FGFR2b-expressing ovarian carcinoma cell line, 234
41 M [14], suggesting that this isoform switching may play a role in ovarian tumorigenesis rather 235
than just being a “passenger” event that accompanies the epithelial differentiation of this tumor 236
type during malignant transformation. Although it is unknown whether the ovarian tumor with 237
the S252W mutation in FGFR2 identified in this study predominantly expresses the “b” or the 238
“c” isoform of FGFR2, it is tempting to speculate that this tumor expresses the “c” isoform only. 239
The S252W mutation would then phenotypically mimic the previously identified isoform 240
switching, thereby allowing the autocrine activation of FGFR2c by FGF7 in OSE cells. The 241
identification of the pathogenic S252W mutation in this single tumor would in turn suggest that 242
the isoform switching previously observed in ovarian tumors plays a role in the pathogenesis of 243
these tumors. The low rate of activating mutations in FGFR2 identified to date may reflect that in 244
this tissue type FGFR2 is already activated in a ligand dependent manner by isoform switching, 245
and may not require additional mutational activation. 246
Y376C is located in the juxtamembrane domain of FGFR2. Studies investigating the 247
causative role of this mutation in Beare-Stevenson syndrome have proposed that the introduction 248
of an unpaired cysteine by this mutation results in receptor activation through formation of either 249
intermolecular bonds (resulting in covalent dimerization between mutant receptors) or 250
intramolecular bonds (resulting in interactions with two cysteines in the transmembrane domain) 251
[34]. Given that the S252W mutation results in ligand-dependent receptor activation, we 252
undertook studies to determine the ligand-dependency of the Y376C mutation. The homologous 253
12
Y372C mutation in FGFR1 results in ligand independent activation of an osteocalcin FGF 254
response element promoter-luciferase reporter in the osteogenic MC3T3 cell line [35], 255
presumably by the formation of intermolecular disulfide bonds [36]. The homologous Y373C 256
mutation in FGFR3c has been shown to result in receptor dimerization, but predominantly ligand 257
dependent activation of the MAPK pathway in HEK293 cells and L8 myoblasts [37]. We 258
assessed mitogen dependence using the BaF3 cell assay. BaF3 cells do not express endogenous 259
FGF ligands or FGFRs and are IL-3 dependent. Introduction and activation of FGFRs has been 260
shown to substitute for IL-3 to promote cell proliferation [38]. As shown in Figure 1A, the 261
Y376C mutation results in ligand independent receptor activation, as evidenced by BaF3 262
proliferation in the absence of FGF ligand. Stimulation with FGF7 resulted in increased 263
proliferation in the Y376C FGFR2b BaF3 cells compared to wildtype FGFR2b (Figure 1B), 264
demonstrating the mutant receptor can be further activated by the addition of ligand. This is in 265
contrast to the S252W mutation that does not lead to BaF3 proliferation in the absence of ligand, 266
similar to wildtype FGFR2b (Figure 1A). The S252W mutation does lead to increased BaF3 267
proliferation in response to its cognate ligand (Figure 1B), as previously reported [30]. We 268
should note that these functional studies were carried out using the “b” isoform of FGFR2 as the 269
effect of the Y376C mutation on receptor dimerization is independent of the “b” or “c” isoform 270
on which it arises. 271
In conclusion, we identified an S252W mutation in a single endometrioid ovarian 272
carcinoma and a Y376C mutation in a single serous ovarian tumor. The S252W mutation 273
violates the ligand binding specificity of FGFR2b and FGFR2c and phenotypically mimics the 274
occurrence of FGFR2 isoform switching previously observed in ovarian cancer whereas the 275
Y376C mutation results in constitutive receptor activation. In the era of personalized medicine, 276
13
we anticipate that hotspot FGFR2 mutations, including S252W and Y376C, will be incorporated 277
into a multi-gene panel to profile rare somatic mutations, allowing identification of FGFR2 278
mutant tumors even within cancer types with low mutation frequency. Additional studies are 279
needed to determine the pathogenic consequences and therapeutic potential of targeting aberrant 280
activation of FGFR2 due to mutation or isoform switching in ovarian cancer. However, the 281
identification of activating mutations in FGFR2 in ovarian tumors that overlap with the known 282
oncogenic mutations in FGFR2 in endometrial cancer, and the selective sensitivity of FGFR2 283
mutant endometrial cancer cell lines to FGFR inhibition [39], raises the possibility that Together 284
these data raise the possibility that inhibition of FGFR2 by either small molecule kinase 285
inhibitors or extracellular blocking antibodiesFGFR inhibitors may be beneficial in the small 286
subset of women whose ovarian tumors possesshave activating FGFR2 mutations. Furthermore, 287
given that at least one identified mutation functionally mimics FGFR2 isoform switching, there 288
is potential that , as well as inthis may extend to the yet undefined subset of women whose 289
tumorscases that have undergone FGFR2 isoform switching. 290
291
292
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Conflict of Interest Statement 293
None of the authors have any conflicts of interest to disclose. 294
295
Acknowledgements/Grant Support 296
We would like to thank the TGen Sequencing Core for their excellent work and Dr. John Carpten 297
(Translational Genomics Research Insitute) for providing ovarian cancer cell line DNAs. We 298
gratefully acknowledge funding from the Department of Defense CDMRP Ovarian Cancer 299
Research Program (W81XWH-08-1-0244, PMP), the National Health and Medical Research 300
Council (Australia) (IGC), the Victorian Breast Cancer Research Consortium (Australia) (IGC), 301
and the American Cancer Society (PF-07-215-01-TBE, SAB). 302
303
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Figure Legends: 428
429
Figure 1. Effects of S252W and Y376C mutations on FGFR2b activity in BaF3 cells (A) 430
Proliferation of BaF3 cells expressing empty vector (EV), wildtype FGFR2b, or mutant (S252W, 431
Y376C) FGFR2b in the absence of FGF ligand. (B) Proliferation of BaF3 cells expressing 432
empty vector (EV), wildtype FGFR2b, or mutant (S252W, Y376C) FGFR2b in response to 433
FGF7, a cognate FGFR2b ligand. 434
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