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Differentiation-Associated Reprogramming of theTransforming Growth Factor b Receptor PathwayEstablishes the Circuitry for Epithelial Autocrine/Paracrine RepairJonathan M. Fleming1, Saqib Shabir1, Claire L. Varley1, Lisa A. Kirkwood1, Angela White2, Julie Holder2,
Ludwik K. Trejdosiewicz1, Jennifer Southgate1*
1 Jack Birch Unit for Molecular Carcinogenesis, Department of Biology, University of York, York, United Kingdom, 2 GlaxoSmithKline R&D, Ware, United Kingdom
Abstract
Transforming growth factor (TGF) b has diverse and sometimes paradoxical effects on cell proliferation and differentiation,presumably reflecting a fundamental but incompletely-understood role in regulating tissue homeostasis. It is generallyconsidered that downstream activity is modulated at the ligand:receptor axis, but microarray analysis of proliferative versusdifferentiating normal human bladder epithelial cell cultures identified unexpected transcriptional changes in keycomponents of the canonical TGFb R/activin signalling pathway associated with cytodifferentiation. Changes includedupregulation of the transcriptional modulator SMAD3 and downregulation of inhibitory modulators SMURF2 and SMAD7.Functional analysis of the signalling pathway revealed that non-differentiated normal human urothelial cells responded inparacrine mode to TGFb by growth inhibition, and that exogenous TGFb inhibited rather than promoted differentiation. Bycontrast, in differentiated cell cultures, SMAD3 was activated upon scratch-wounding and was involved in promoting tissuerepair. Exogenous TGFb enhanced the repair and resulted in hyperplastic scarring, indicating a feedback loop implicit in anautocrine pathway. Thus, the machinery for autocrine activation of the SMAD3-mediated TGFbR pathway is establishedduring urothelial differentiation, but signalling occurs only in response to a trigger, such as wounding. Our studydemonstrates that the circuitry of the TGFbR pathway is defined transcriptionally within a tissue-specific differentiationprogramme. The findings provide evidence for re-evaluating the role of TGFbR signalling in epithelial homeostasis as anautocrine-regulated pathway that suppresses differentiation and promotes tissue repair. This provides a new paradigm tohelp unravel the apparently diverse and paradoxical effect of TGFb signalling on cell proliferation and differentiation.
Citation: Fleming JM, Shabir S, Varley CL, Kirkwood LA, White A, et al. (2012) Differentiation-Associated Reprogramming of the Transforming Growth Factor bReceptor Pathway Establishes the Circuitry for Epithelial Autocrine/Paracrine Repair. PLoS ONE 7(12): e51404. doi:10.1371/journal.pone.0051404
Editor: Yao Liang Tang, University of Cincinnati, United States of America
Received September 20, 2012; Accepted November 2, 2012; Published December 19, 2012
Copyright: � 2012 Fleming et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permitsunrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Funding: JMF was in receipt of a Biotechnology & Biological Sciences Research Council Industrial CASE studentship with GlaxoSmithKline. JS holds a researchchair supported by York Against Cancer. AW and JH are employees of GlaxoSmithKline. The funders did not control the study design, data collection and analysis,decision to publish, or preparation of the manuscript.
Competing Interests: The authors have read the journal’s policy and have the following conflicts: Affiliations: AW and JH are employees of GlaxoSmithKline.Patent: The differentiated normal human urothelium used in this study is patented as Cross W and Southgate J (2004), Biomimetic Urothelium, WO2004/011630.This does not alter the authors’ adherence to all the PLOS ONE policies on sharing data and materials.
* E-mail: [email protected]
Introduction
The high capacity of epithelial tissues for self-repair and renewal
is effected through locally-regulated proliferation and differentia-
tion of resident progenitor cells rather than recruitment of
exogenous progenitor cells to the site. A dysfunction of regener-
ative mechanism(s) lies at the heart of numerous age-related
diseases that afflict epithelial tissues, from chronic wounding and
inflammation through to cancer, making epithelia a key target for
regenerative and replacement therapies. As a model epithelium for
regenerative studies, the uro-epithelial lining of the bladder and
associated urinary tract provides an excellent system, being
mitotically-quiescent with a low constitutive turnover rate, but
with an exceptionally high capacity for regeneration [1]. In
addition, urothelium expresses specific, highly objective markers of
terminal differentiation, such as the uroplakins [2,3], that define its
specialised function as a urinary barrier.
In determining the mechanisms that orchestrate and mediate
regeneration, a common perception is that the epithelium relies on
the subjacent stroma. Indeed, an elegant recent study in the mouse
bladder has provided evidence of an inductive paracrine loop
operating between urothelium and stroma [4]. Nevertheless, there
is also considerable evidence for autonomous growth regulation,
for example through autocrine activation of epidermal growth
factor receptor (EGFR) signalling [5].
The TGFb superfamilies of ligands and cognate receptors act as
major regulators of tissue development and homeostasis. Although
TGFb is thought of primarily as an anti-proliferative agent, it can
also influence cell migration and promote apoptosis, and crucially,
act as an inducer of epithelial to mesenchymal transition (EMT), a
process implicated in tissue differentiation and wound-healing [6].
The precise effects of TGFb can be paradoxical – for example, it
may act as growth inhibitor or mitogen depending on concentra-
tion, cell type and context [7]. Similarly, its pro-apoptotic effects
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can be context-dependent, as illustrated by the observation that
TGFb promotes death by neglect only of post-activated T cells,
but has no effect during T cell activation [8].
Responses to TGFb are governed at several levels, including the
nature of the ligand and the cell type-specific transcriptome that
specifies the repertoire of surface receptors, the downstream
SMAD-mediated and interactive signal transduction pathways and
available transcriptional targets. In concert, these provide the basis
for a cellular response that is influenced by the proliferative,
differentiated and pathogenic status of the cell [9].
Much of the understanding of the role of TGFb in human cells
derives from studies of tumour-derived cell lines maintained in
‘‘simple’’ two-dimensional culture. In order to address its role in a
more sophisticated tissue system, we have exploited a normal
human epithelial cell culture system that we have previously
demonstrated can be switched from a regenerative to differenti-
ated phenotype. In serum-free, low calcium conditions, normal
human urothelial (NHU) cells display a highly proliferative
regenerative phenotype and do not express markers of urothelial
differentiation, even at confluency [10]. These same cultures self-
organise to form a stratified, functionally-differentiated urothelium
when switched to appropriate in vitro conditions [11]. Alterna-
tively, terminal differentiation may be induced pharmacologically
by activation of PPARc with concurrent inhibition of EGFR; this
initiates a programme of transcriptional changes that results in
expression of a late/terminal-differentiated urothelial cell pheno-
type [12,13,14].
In this study. we applied a microarray approach to identify gene
expression changes common to both in vitro methods for inducing
urothelial cytodifferentiation. The discovery of transcriptional
changes in the canonical TGFb signalling pathway suggested that
TGFb-related signalling was involved in the cytodifferentiation
process. To test this hypothesis, the effects of exogenous and
endogenous TGFb signalling on cell growth, differentiation and
wound repair were examined. Our data support a number of
unexpected conclusions leading to a re-evaluation of the precise
role of TGFbR signalling in epithelial homeostasis.
Materials and Methods
MaterialsPD153035 (EGFR tyrosine kinase inhibitor; Calbiochem);
SB431542 (TGFb Superfamily Type I Activin Receptor-Like
Kinase receptor inhibitor; Sigma) and troglitazone (TZ: PPARcagonist; gift from Parke-Davis Pharmaceutical Research) were
dissolved in DMSO. Human recombinant TGFb1 (R&D Systems)
and TGFb2 (Peprotech) were dissolved in buffer. Appropriate
solvent controls were included in all experiments.
Rabbit affinity-purified heteroantibodies against AKT, pAKT,
pERK and pSMAD3 (Cell Signaling Technology), and against
SMAD3 (Abcam) were used together with monoclonal antibodies
to ERK (clone 16; Transduction Laboratories), Ki67 (clone MM1;
Novocastra)), cyclin D1 (clone DCS-6; Cell Signaling Technology)
and b-actin (clone AC-15; Sigma). Secondary antibodies used for
western blot analysis were Alexa 680-conjugated goat anti-mouse
IgG or Alexa 800-conjugated goat anti-rabbit IgG (Invitrogen) and
for immunofluorescence were goat anti-mouse or goat anti-rabbit
secondary antibody conjugated to Alexa 488 (green) or Alexa 594
(red) (Invitrogen).
Cell cultureHuman biological samples were sourced ethically with informed
written consent from patients and approval for use in research
from the Leeds (East) and the York Research Ethics Committees.
Finite NHU cell lines were established as detailed elsewhere
[15,16]. For routine propagation, cultures were maintained as
monolayers in low calcium (0.09 mM) Keratinocyte Serum Free
Medium (Invitrogen) containing bovine pituitary extract and EGF,
and supplemented with cholera toxin (KSFMc). Cultures were
sub-cultured at just-confluence as described [15,16] and used for
experiments between passages 3 to 5.
For induction of differentiation, NHU cell cultures were treated
with either a) 1 mM TZ with concurrent 1 mM PD153035 to block
downstream EGFR signalling (TZ/PD; [13]) or b) 5% adult
bovine serum (ABS, Harlan Sera-Lab) and 2 mM CaCl2 (ABS/
Ca2+) as described [11]). Control (non-differentiated) cultures were
maintained in parallel in KSFMc and used at the same time points
(between 24 to 144 hours). Cultures were lysed in situ with
TRIzolH to prepare RNA by the manufacturer’s recommended
protocol (Invitrogen). RNA samples were treated with a DNA-free
kit (Ambion) and quantified by UV spectrophotometry.
The HeLa-S3 cell line was used in some experiments as a
positive control.
UPK2-eGFP lentivirusA lentivirus was produced using the ViralPowerTM Promoterless
Lentiviral GatewayH Expression system (Invitrogen) in which
enhanced GFP (eGFP) was expressed under the control of the
UPK2 promoter. The 1.8 kb functional fragment of the UPK2
promoter [17] was amplified from 500 ng of human genomic
DNA using Expand high fidelity Taq polymerase enzyme (Roche)
using primers 59 AGG CTT CAC CCC AGA CCC ACT GC39
and 59GCT GGG CTG GGA GGT GGA ATA GG 39. The
resulting fragment was ligated into the pENTRTM 59-TOPOH TA
cloning vector using topoisomerase, transformed into TOP10
E.coli and selected in kanamycin (50 mg/ml). Successful transfor-
mants were selected by their EcoRI digestion pattern and were
verified by dye-terminator sequencing (Lark Technologies). eGFP
was cloned into the pENTRTM vector and selected as above. Both
vectors were combined with the Lenti6/R4/R2/V5-DEST vector
and incubated with LR ClonaseTM Plus to produce an expression
clone by homologous recombination. Expression constructs were
transformed into One shotH Stbl3TM chemically-competent E.coli,
selected with 100 mg/ml ampicillin and purified using a Qiagen
endofreeTM Maxi-prep column. UPK2-eGFP lentivirus produced
from 293FT packaging cells as per the ViraPower Lentiviral
Expression Systems protocol (Invitrogen) was filtered through a
0.45 mm filter and used immediately to transduce NHU cells in the
presence of 6 mg/ml polybrene. Following selection of stable
transductants with 1 mg/ml blasticidin, eGFP fluorescence was
used as a correlate of UPK2 expression in NHU cells following
induction of differentiation.
MTT assayThe relative biomass of cultures was determined using a methyl
thiazolyldiphenyl tetrazolium bromide (MTT) assay to assess
mitochondrial dehydrogenase activity. NHU cells were seeded in
96-well plates at 2.56103 cells/well. One plate was left untreated
to establish initial cell viability at T = 0. The remaining plates were
incubated with inhibitors or recombinant growth factors in 6
replicates. To assay, wells were incubated with 200 ml MTT
(0.5 mg/ml) at 37uC for 4 hours and the formazan crystals were
dissolved in 200 ml DMSO and measured spectrophotometrically.
Time lapse microscopy for scratch/migration analysisNHU cells were seeded at 2.56105 cells/well in 24 well plates in
KSFMc in the presence or absence of 5% ABS/2 mM CaCl2 and
grown to confluence where cultures were contact-inhibited and
TGFbR Pathway Reprogramming during Differentiation
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out of cell cycle [18]. Media were replenished every 2–3 days.
Cultures were pre-treated with TGFb and/or inhibitors for
3 hours and then scratched once using a P100 pipette tip to
generate a 500 mm wound, washed in KSFMc to remove cell
debris and replenished with fresh medium containing appropriate
treatment. Cultures were observed by differential interference
contrast videomicroscopy (Olympus IX81 microscope) in an
environmental chamber with an automated mechanical stage.
Individual images were captured digitally every 10 minutes for
20 hours and were analysed by measuring the wound area and
expressing it as the percentage healed compared to the original
area of the wound in replicate (n = 3) cultures.
Affymetrix DataFollowing RNA extraction, mRNA was converted to cDNA and
then to biotin-labelled cRNA before hybridising to AffymetrixTM
GeneChip Human Genome U133 Plus 2.0 (HG-U133 Plus 2.0)
arrays. The array chips were washed and scanned at 560 nm using
an Affymetrix GeneChip Scanner.
The MAS5 Algorithm was used for background correction,
normalisation and probe summarisation using ArrayAssist soft-
ware (Affymetrix). Fold-change data were generated by comparing
the non-differentiated proliferating control against the day 6
differentiated cultures. Changes to specific gene targets were
validated on the target RNA and on RNA generated from
independent NHU cell lines by real-time PCR.
Real-Time PCR analysis1 mg DNA-free RNA was reverse-transcribed using 50 ng of
random hexamer primers and Invitrogen’s SuperscriptTM II first-
strand cDNA synthesis kit according to the manufacturer’s
protocol. Reverse transcriptase-negative and no template controls
were included in all experiments and GAPDH was used as the
normalisation transcript. Quantification of transcript expression
was conducted on 10% of the cDNA reaction by real-time PCR
using SYBR-green or TaqMan reagents (Applied Biosystems).
For relative quantification of transcript expression, template
cDNA was mixed with SYBR-green PCR Master Mix and
400 nM of each forward and reverse target gene primer (Table 1)
and analysed on an ABI PrismH 7300 Sequence Detection System.
The thermal profile was: 2 minute hold at 50uC, incubation at
95uC (10 min), followed by 40 cycles of denaturation at 95uC(15 sec) and elongation at 72uC (1 min). Dissociation curves were
performed to confirm the presence of a single amplification
product and the absence of primer dimers for each primer set.
Assay efficiency was validated using the CT slope method prior to
use and both test and endogenous assays were shown to be of
equal efficiency. SYBR-green results were expressed as relative
quantification (RQ) values (Applied Biosystems).
For TaqMan, 5 ml template cDNA was mixed with 12.5 ml of
TaqMan 26Universal Master Mix (Applied Biosystems), 300 nM
of each forward and reverse UPK2 primers, 200 nM of the UPK2
probe (Vic fluorophore), 200 nM each of GAPDH forward and
reverse primers and 150 nM of the GAPDH probe (Fam
fluorophore) as described [19]. Serial dilutions of human genomic
DNA (100 - 0.16 ng) were used to generate standard curves.
Normalised values of UPK2 mRNA were obtained by dividing the
UPK2 amount by the GAPDH endogenous reference amount.
Western blottingCultures were lysed into reducing electrophoresis sample buffer
containing 0.2% (v/v) protease inhibitors (Cocktail Set III,
Calbiochem) and assayed with a Coomassie protein assay reagent
kit (Pierce). Proteins were resolved by electrophoresis on 1 mm 4–
12% Bis-Tris NuPAGE pre-cast polyacrylamide gels (Novex,
Invitrogen). 20–25 mg of sample was loaded alongside 5 ml of All-
Blue pre-stained markers (BioRad), electrophoresed in MOPS or
MES running buffer and electrotransferred to Immobilon PVDF
transfer membrane (Millipore). Membranes were blocked in
OdysseyTM blocking buffer (LI-COR systems) for 1 hour, probed
with primary antibody then secondary antibodies before being
visualised by infrared scanning followed by analysis on an Odyssey
LI-COR infrared scanner. b-actin was used as a loading control to
normalise band density to protein loading. Blots were stripped for
reprobing in Western Blot Recycling Kit reagent (Autogen
Bioclear) for 30 minutes at ambient temperature.
ImmunocytochemistryNHU cells were grown on TeflonH-coated 12-well glass slides
and fixed in a 1:1 mixture of methanol:acetone and air-dried, or
fixed in 10% (v/v) formalin for 15 minutes and washed. Formalin-
fixed slides were permeabilised in 0.1% (w/v) Triton-X. Primary
antibody was applied overnight at 4uC, followed by incubation
with secondary antibody conjugated to Alexa 488 or Alexa 594.
Nuclei were visualised by staining with 0.1 mg/ml Hoechst 33258.
Slides were examined under epifluorescence illumination using an
Olympus BX60 microscope.
ElectrophysiologyElectrophysiological measurements were performed as de-
scribed [11]. NHU cell cultures were grown on 4 mm pore
Snapwell chambers (Corning Incorporated) for seven days in
triplicate. Electrophysiological properties were measured using a
VCC MC2 multi-channel voltage-current clamp (Physiologic
Instruments Inc) and U-2500 vertical modified Ussing chambers
(Warner Instruments) designed to fit the Snapwell inserts. The
spontaneous potential difference (V, measured in mV) and short
circuit current (I, measured in mA) across the urothelial cell layer
were measured using Ag-AgCl microelectrodes connected to the
voltage-current clamp. The transepithelial electrical resistance
(TER) was calculated using Ohm’s law (I = V/R) and adjusted for
the surface area of the membrane (1.13 cm2) to give the TER in
V.cm2.
StatisticsParametric statistics (mean and SD(n-1)) were used throughout
for descriptive purposes and tests of significance were by means of
a two-tailed t-test.
Table 1. Primers for SYBR-green RTqPCR.
Gene Reference Sequence Primer Sequence
SMAD3 NM_005902 TCCAATTCGGAGCGCTTCT
ACTGCTGCATTCCTGTTGACA
TGFbRI NM_004612 AGCGGTCTTGCCCATCTTC
CTATGAGCAATGGCTGGCTTT
TGFbRII NM_003242 TGTCTGTGGATGACCTGGCTAA
TTCTGGAGCCATGTATCTTGCA
SMURF2 NM_022739 CGTGGAGAAGAAGGCCTTGA
CATGTGACAAGAGATACAACCATTCC
Sequences shown are 59-39 with forward primer in bold.doi:10.1371/journal.pone.0051404.t001
TGFbR Pathway Reprogramming during Differentiation
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Figure 1. Analysis of differentiating NHU cells. NHU cells were differentiated by (a) TZ/PD or (b) ABS/Ca2+ protocols, as described in Materialsand Methods, for the times indicated. Following RNA extraction, cDNA was generated and absolute quantitative PCR for UPK2 was performed. TheVIC-labelled UKP2 product was normalised against the internal control (FAM-labelled GAPDH). Bars represent mean 6 SD of triplicate PCRdeterminations. NHU cells transduced with UPK2-eGFP lentivirus were (c) left untreated, or differentiated by (d) TZ/PD or (e) ABS/Ca2+ protocols andassessed by epifluorescence; 6 day timepoint shown. Scale bar 80 mm. To verify changes in TGFb target gene expression during differentiation,cultures from an independent NHU cell line were induced to differentiate with TZ/PD or ABS/Ca2+ for 72 h (f). RTqPCR using comparativequantification by cycle threshold (CT) with SYBRgreen was performed in triplicate and normalised against the internal control (GAPDH). Data showTGFb pathway-associated gene expression in response to treatment with TZ/PD or ABS/Ca2+ versus vehicle control. Bars represent mean 6 SD.doi:10.1371/journal.pone.0051404.g001
TGFbR Pathway Reprogramming during Differentiation
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Results
Urothelial cytodifferentiation and associated genechanges
Expression of urothelium differentiation-restricted uroplakin 2
(UPK2) transcript was used as a marker to monitor the
differentiation status of NHU cell cultures. Whereas there was
minimal UPK2 expression in control cultures maintained in
standard growth medium, both differentiation-inducing protocols
(TZ/PD and ABS/Ca2+) resulted in time-dependent increases in
UPK2 transcript (Figs. 1A–B). NHU cultures stably transduced
with UPK2-eGFP lentivirus contained few eGFP-expressing cells
even at confluence (Fig. 1C). Following induction of differentia-
tion, a majority of cells became fluorescent within 6 days. Cells
differentiated pharmacologically by TZ/PD remained discrete and
rounded, whereas those differentiated by ABS/Ca2+ formed
integrated, overlying cell sheets (Figs. 1D–E). To identify gene
expression changes common to both differentiation strategies,
gene arrays were performed on cRNA derived from parallel
cultures harvested at 6 days post induction of differentiation. The
array data for the two differentiation-inducing protocols was
validated by examining changes in expression of marker genes
associated with differentiated urothelium, including UPK2 (Table
S1).
A pair-wise comparison of the arrays against a non-differenti-
ated control was used to identify genes that showed significant
(p,0.01) changes in expression based on a log2-fold change in
signal intensity. Using the TZ/PD protocol, the expression of 2511
genes was significantly increased and 2926 showed a decrease.
With ABS/Ca2+, 2326 genes were increased and 1984 decreased.
2116 gene changes were common to both protocols.
The method-independent subset of gene changes common to
both differentiation-inducing protocols was assessed by functional
ontology within the IngenuityTM Systems software suite. This
indicated gene expression changes implicated in programs of
cellular growth/proliferation, migration, death, and cell-cell
signaling. Within the growth factor signalling category, TGFb,
IGF-1, HGF and EGF emerged as the top four modified
pathways, with 8/83 (9.6%), 7/100 (7.0%), 7/103 (6.8%) and 3/
49 (6.1%) gene changes for each pathway, respectively.
Table 2. AffymetrixTM genechip analysis in differentiatedversus proliferative NHU cells.
ABS/Ca2+ TZ/PD
Ligand TGFb1 23.62 nc
TGFb2 +5.30 nc
TGFb3 A A
Receptor TGFbRI 21.69 21.53
TGFbRII 27.06 22.29
R-SMAD SMAD1 nc nc
SMAD2 nc nc
SMAD3 +5.06 +3.79
SMAD5 nc nc
SMAD9 A A
Co-SMAD SMAD4 nc nc
I-SMAD SMAD6 A A
SMAD7 21.44 22.02
SMURF SMURF1 nc nc
SMURF2 22.77 24.27
NHU cells were differentiated with TZ/PD or ABS/Ca2+ and harvested after 6days. Biotin-labelled cRNA generated from control (proliferating) and 6 daydifferentiated cultures was hybridised to U133 genechips.Numbers represent fold change; + and 2 indicate increased and decreasedexpression, respectively; nc = no change and A = absent.doi:10.1371/journal.pone.0051404.t002
Figure 2. Effect of differentiation on SMAD3 and pSMAD3protein expression in NHU cells. (a) Protein lysates were preparedfrom NHU cells treated with 0.1% DMSO (control), TZ/PD or ABS/Ca2+
for 1, 3 and 6 days. Cell extracts (25 mg) were resolved on 4–12% Bis-Trispolyacrylamide gels and transferred onto PDVF membranes. Mem-branes were incubated with titrated primary antibodies for 16 h at 4uCto SMAD3 and pSMAD3, as indicated. Bound antibody was detectedwith Alexa FluorH 680 and LI-COR IRDyeTM 800 conjugated secondaryantibodies and visualised using the OdysseyTM Imaging System. b-actinwas used as an internal loading control. HeLa cells treated with TGFb1(2 ng/ml) for 24 h was used as a positive control. L is the molecular sizeladder. (b) NHU cells were seeded at 500 cells/cm2 onto glass slides,allowed to adhere and treated with or without TZ/PD or ABS/Ca2+ for 6days and fixed in formalin. Media were replaced every 3 days with freshtreatments. Indirect immunofluorescence was performed with anti-SMAD3 and anti-pSMAD 3 antibodies as indicated and detected withAlexa 594-conjugated secondary antibodies. Picture inserts show therespective Hoescht 33258 nuclear stain. Scale bar 90 mm.doi:10.1371/journal.pone.0051404.g002
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Differentiation-associated changes in the TGFb pathwayPathway analysis with Ingenuity software was used to infer (at
the transcript level) which components of the TGFbR pathway
components were expressed and/or modified by differentiation.
Present in both proliferative and differentiated cultures were
expressed all the necessary pathway components for the canonical
TGFbR/Activin/SMAD pathway, whereas components of the
BMP/Nodal-related SMAD signalling pathway were either absent
or showed no change in expression following differentiation
(Table 2; a full profile of TGFb type I and II receptor expression is
shown in Supplementary Table S2).
Figure 3. Influence of TGFb and TGFb inhibitors on morphology and proliferation of NHU cell cultures. (a) Phase-contrast micrographsof NHU cell cultures at confluence following growth for 6 days in the presence of 0.1% DMSO, TGFb1 (2 ng/ml) or SB431542 (3 mM). Scale bar:250 mm. (b) MTT assay showing dose-response curves of viable biomass from non-differentiated (proliferative) NHU cells treated for 4 days withTGFb1 and TGFb2. Bars represent mean 6 SD of six replicates. (c) NHU cells were treated with the inhibitors SB431542 (10 mM) or PD153035 (1 mM) inthe presence or absence of TGFb1 (2 ng/ml) for 4 days and viable biomass was assessed by MTT assay. Bars represent means 6 SD of six replicatewells. Statistical analysis was by means of a 2-tailed t-test, *** = p,0.0001. (d) NHU cells from three independent cell lines (A, B, C) were cultured inthe presence or absence of SB431542 (3 mM) for 4 days before growth was assessed by MTT assay. Bars represent means 6 SD of six replicate wells.doi:10.1371/journal.pone.0051404.g003
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From the arrays, SMAD3 was up-regulated .3-fold in ABS/
Ca2+ and .5-fold in TZ/PD differentiated cell cultures. Although
there was no change in SMAD2 transcript expression, there was a
decrease in SMURF2, a SMAD ubiquitination regulatory factor
responsible for targeting SMAD2 for degradation. There was
downregulation of transcripts for inhibitory SMAD7 and for
TGFb-RI and TGFb-RII. These trends were confirmed by
comparative RTqPCR on samples generated from an independent
cell line at 72 hours post induction of differentiation (Fig. 1F).
To determine whether changes in SMAD3 transcript translated
to changes in protein expression, differentiating NHU cell cultures
were analysed by immunoblotting (Fig. 2A). Total SMAD3 protein
was increased following both differentiation treatments. The
relative amount of phosphorylated SMAD3 (pSMAD3) decreased
in control cells from days 1–6 as cells reached confluence.
Differentiated cells expressed very low amounts of pSMAD3
indicating that although basal SMAD3 expression increased,
actual activity based on phosphorylation decreased, possibly as a
reflection of other changes to the pathway (Table 2). These
findings were confirmed by immunofluorescence (Fig. 2B):
SMAD3 immunolabelling was most intense in differentiated cells,
but pSMAD3 labelling was low or absent in the majority of cells in
all culture conditions, with intense nuclear labelling observed in
occasional cells only.
Effect of TGFb on NHU cell morphology and growthNeither exogenous TGFb ligands, nor specific inhibition of
TGFbRI tyrosine kinase with SB431542 had any effect on the
morphology of NHU cells in culture (Fig. 3A).
MTT biomass assays performed over 6 days showed that
TGFb1 and TGFb2 both induced dose-dependent growth
inhibition of non-differentiated (proliferative) NHU cells, with
IC50 values calculated as 0.2–0.4 ng/ml for TGFb1 and 0.3–
0.5 ng/ml for TGFb2, respectively (Fig. 3B). Subsequent exper-
iments were performed with 2 ng/ml TGFb1, representing .80%
(EC80) of the maximal response, which was equivalent to the
inhibition induced by 1 mM PD153035, an EGFR-specific tyrosine
kinase inhibitor included as positive control (Fig. 3C). 1–10 mM
SB431542 abrogated the growth inhibitory action of TGFb1 and,
when used in the absence of exogenous TGFb1, had a small but
reproducible positive effect on culture biomass (Fig. 3D).
SMAD3 was phosphorylated in NHU cells stimulated with
TGFb1 for 24 hours (Fig. 4). SB431542 inhibited TGFb1-induced
SMAD3 phosphorylation and abrogated the small basal expres-
sion of pSMAD3 seen in control cultures without exogenous
TGFb, indicating autocrine activity (Fig. 4), as the growth medium
supplements contained minimal TGFb activity and did not
account for the baseline activity (Fig. S1). Modulation of TGFbsignalling with exogenous TGFb ligand or SB431542 had small
reciprocal effects on ERK and AKT signalling (Fig. 4). Inhibition
of EGFR activity with PD153035 had little direct effect on
SMAD3 activation, but enhanced the effect of TGFb on pSMAD3
by .50%. This suggested cross-talk between the EGFR/TGFbR
pathways, but the consequence of this for cell phenotype was not
assessed in this study.
Effect of TGFb1 on NHU cytodifferentiationThe changes observed in TGFb-associated transcript and
protein expression suggested that modulation of TGFb/activin
signalling was involved in the differentiation of human urothelial
cells. To test this hypothesis, the effect of exogenous TGFb1 was
assessed on expression of UPK2 transcript by quantitative RT-
PCR (Fig. 5A). As a positive control, NHU cultures were induced
to differentiate using the TZ/PD and ABS/Ca2+ protocols.
TGFb1 alone or in combination with PD153035 or TZ did not
induce UPK2 expression, showing that TGFb1 alone does not
induce or promote differentiation in NHU cell cultures. Inclusion
of TGFb1 into the TZ/PD protocol actually reduced expression of
UPK2 transcript, implying an inhibitory effect on differentiation
by that exogenous TGFb1 (Fig. 5A). Inclusion of SB431542 to
inhibit TGFb signalling did not significantly affect UPK2
transcript expression (not shown).
Transepithelial electrical resistance can be used as a functional
measure of urothelial differentiation and barrier formation. NHU
cell cultures grown in standard growth conditions in KFSMc
medium did not develop a tight barrier, with TER measurements
of ,100 V.cm2, irrespective of whether or not they were cultured
with 2 ng/ml TGFb1 or 3 mM SB431542. The presence of
exogenous TGFb1 or SB431542 during NHU differentiation
induced by the ABS/Ca2+ protocol did not significantly affect
barrier function, with TER values in the region of 2640–
3050 V.cm2 (Fig. 5B).
Effect of TGFb1 on urothelial scratch-wound repairTo investigate whether TGFb1 signalling had a specific role in
regenerative repair, confluent, contact-inhibited cultures of non-
differentiated and ABS/Ca2+ differentiated NHU cells were
scratch-wounded in the presence of 2 ng/ml TGFb1 and/or
3 mM SB431542 or 1 mM PD153035, and the repair was
monitored by time-lapse microscopy. In non-differentiated
cultures, 500 mm scratch wounds repaired within 6 hours in both
control and SB431542-treated cells, but repair was retarded by
exogenous TGFb1, or by inhibiting EGFR with PD153035
(Figs. 5C and 5E).
By contrast, in differentiated NHU cell cultures (Fig. 5D), the
repair of 500 mm scratch wounds was accelerated when exogenous
TGFb1 was present and was blocked back to control values by
SB431542. Repair was inhibited by PD153035 or by SB431542
alone. Measurement of the time taken to achieve full repair
showed that TGFb-treated and control cultures had healed by 10
and 14 hours, respectively, whereas wounds treated with
SB431542 or PD153035 did not heal over the time course of
the experiment (Fig. 5F). In the presence of exogenous TGFb1, the
repaired region appeared as a pronounced ‘‘scar’’ (Fig. 5G). By
contrast, SB431542 or PD153035 compromised the quality of the
final repair, resulting in persistent unhealed patches along the
wound (Fig. 5G). Combined treatment with PD153035 and
SB431542 did not have an additive effect on wound repair,
suggesting they act through a common pathway (not shown).
pSMAD3 immunolabelling was investigated in ABS/Ca2+-
differentiated cultures following scratch-wounding in the presence
of 2 ng/ml TGFb1, 3 mM SB431542 or 1 mM PD153035 (Fig. 6).
In control cultures, pSMAD3 was only detected in a few cells
Figure 4. Immunoblot analysis of NHU cell response to TGFb signalling. (a) Sub-confluent NHU cells were treated with or without PD153035(1 mM), TGFb (2 ng/ml) or SB431542 (3 mM) for 24 h before preparation of cell lysates. Cell extracts (15 mg) were analysed by Western blot analysis asdescribed in Materials and Methods. b-actin was used as an internal loading control. (b) Gel band densities of the Western blots in (E) using the LI-COR OdysseyTM Imaging System and normalised to b-actin to show the changes in phosphorylated protein. The ratio of phosphorylated:total proteinin the control was taken as 1.0, as indicated by the dashed line.doi:10.1371/journal.pone.0051404.g004
TGFbR Pathway Reprogramming during Differentiation
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TGFbR Pathway Reprogramming during Differentiation
PLOS ONE | www.plosone.org 9 December 2012 | Volume 7 | Issue 12 | e51404
immediately along the wound edge and a few cells back. This was
weaker in intensity, but similar in distribution to the pattern of
pSMAD3 labelling observed in TGFb1-treated cultures, where
intense nuclear labelling was present in the 5–10 cells adjacent to
the wound edge (Fig. 6). Cultures treated with either SB431542 or
PD153035 showed limited pSMAD3 labelling along the wound
edge, but this was very much reduced relative to controls.
A very few cells surrounding the wound edge were in the mitotic
cycle in control and TGFb1-treated cultures, as judged by Ki67
immunofluorescence. There was no evidence of Ki67 labelling in
cultures treated with SB431542. This suggests that migration
rather than proliferation was the predominant event contributing
to closure of the scratch wound (Fig. 6).
Discussion
TGFb is a pleiotropic cytokine implicated in tissue develop-
ment, repair, remodelling and pathogenesis. The diversity of its
effects is presumed to be dependent on both the target cell type
and signalling context, including ligand sequestration and the
modulation of ligand release. Interpretation of TGFb signalling is
further complicated by biphasic effects, where responses induced
at low concentrations are different or absent at higher concentra-
tions of agonist, or which, in combination with a second stimulus,
can invoke different responses [20]. Thus, dissection of the precise
relationship between TGFb signalling and cell/tissue response is,
by its very nature, confounded by the complexity of the biological
system studied. This study of a normal human in vitro system that
represents both regenerative and differentiated states has provided
novel insights. We have shown that TGFb signalling is
fundamentally different in proliferating and differentiated urothe-
lial cell cultures, respectively, both in terms of the nature of the
activating signal (paracrine versus autocrine) and the output
response (growth inhibition versus wound-healing). The findings
revealed that urothelial cytodifferentiation induces major changes
in the functional programming of the canonical pathway and this
itself has important implications for pathway modulation in
pathological states. Critically, our study demonstrates that this
pathway reprogramming is secondary to the differentiation process
itself, but contributes to a fundamental property of the mature
tissue in its potential for self-regeneration.
It is axiomatic that the activity of a signal transduction pathway
is modulated through activation/inhibition of the components
rather than direct changes in their expression. However, our
transcriptome and ontology analysis revealed that the TGFb/
TGFbR/Activin/SMAD signalling pathway is a major target for
transcriptional reprogramming during urothelial differentiation.
Confidence that this is a fundamental, differentiation-associated
change is supported by the observation that two independent
differentiation-inducing protocols – one initiating the terminal
differentiation transcriptional programme in individual cells and
the other enabling differentiated tissue development - both
induced common changes in the TGFbR signal transduction
pathway. This was a wholly unexpected observation and suggests a
paradigm shift in pathway function. Whereas there was reduced
expression of the two TGFb receptors in differentiated cells, this
was countered by an upregulation of both SMAD3 effector and
SMURF2, a SMAD ubiquitination regulatory factor responsible
for targeting SMAD2 for degradation. In addition, there was
downregulation of SMAD7, which negatively regulates TGFbRI
Figure 5. Effects of TGFb on differentiation, barrier function and scratch wound repair in NHU cell cultures. (a) NHU cells weredifferentiated with or without TZ/PD or ABS/Ca2+ in the presence or absence of TGFb; UPK2 expression was assessed by RTqPCR after 4 days andnormalised against GAPDH. Controls included SB431542, vehicle (0.1% DMSO), PD153035 and TZ alone. Bars represent means 6 SD of triplicate PCRdeterminations. (b) Barrier function was assessed by TER measurement after 7 days culture of NHU cells seeded at 0.56106 cells/cm2 onto SnapWellTM
membranes and treated with or without ABS/Ca2+ in the presence of DMSO (0.1%), TGFb1 (2 ng/ml) or SB431542 (3 mM). Bars represent mean 6 SDof 3 independent replicate cultures. (c–g) After 7 days pre-culture with or without ABS/Ca2+ to induce differentiation, confluent cultures wereincubated with DMSO (0.1%, vehicle control), TGFb1 (2 ng/ml), SB431542 (10 mM) or PD153035 (1 mM) for 3 h and then scratch-wounded. Cultureswere maintained in respective treatments in an environmental chamber and images were taken every 10 minutes by time-lapse microscopy until thewounds healed. The experiment was repeated on 3 independent NHU cell lines with the same results. Differential interference contrast micrographsare shown for (c) non-differentiated (6 h) and (d) differentiated cultures (8 h) post-wounding; scale bar 500 mm. The time-course of wound repair wasquantified from timelapse micrographs at 2 hour intervals and expressed against the original wound as the percentage healed for confluent (e) non-differentiated and (f) differentiated cultures. Points represent means of triplicate cultures 6 SD. Phase contrast micrographs (g) of repaired scratchwounds in differentiated NHU cell cultures after 16 h in the presence of DMSO (0.1%), TGFb1 (2 ng/ml), PD153035 (1 mM) or SB431542 (3 mM). Scalebar: 500 mm.doi:10.1371/journal.pone.0051404.g005
Figure 6. Localisation of phospho-SMAD3 in scratch-woundeddifferentiated NHU cell cultures. NHU cells were induced todifferentiate by 7 day culture with ABS/Ca2+ prior to treatment withDMSO (0.1%, vehicle control), TGFb1 (2 ng/ml), SB431542 (3 mM) orPD153035 (1 mM) for 3 hours and then scratched. Cells were maintainedin treatments for 8 hours post-wounding and formalin fixed beforeimmunofluorescence labelling as described in the Materials andMethods. Picture inserts or merged images show the respectiveHoechst 33258 nuclear stain. Yellow lines indicate wound margins.Scale bar: 100 mm.doi:10.1371/journal.pone.0051404.g006
TGFbR Pathway Reprogramming during Differentiation
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through interactions with SMURF2. The reduced receptor
expression in association with an upregulation of effector and
downregulation of inhibitory components of the pathway indicates
a shift in the threshold for pathway activation and the potential for
a more vigorous response once activation has been triggered.
TGFb has long been associated with growth regulation and
differentiation during tissue development and repair, and in some
systems, it has been reported that TGFb induced differentiation as
a corollary of its growth inhibitory effects [21,22]. However, far
from inducing differentiation, we found that exogenous TGFb had
an inhibitory effect. A role for TGFb signalling in urothelial
cytodifferentiation has been previously suggested [23,24] and these
reports are consistent with our interpretation of this study –
namely that the TGFb signalling machinery is altered as a
consequence, rather than function of urothelial differentiation.
Because TGFbR signalling had no apparent role in the
differentiation process itself, we examined its contribution to
wound repair in differentiated urothelial cell sheets. These
experiments revealed that repair was inhibited by the blocking
of TGFbR-specific tyrosine kinase in absence of exogenous TGFband also that exogenous TGFb induced hypertrophic scarring.
The former observation is indicative of autocrine TGFbR
signalling, which is further supported by the immunolocalisation
evidence showing pSMAD3 activation in proximity to the wound
edge. Thus, the machinery for autocrine activation of the
SMAD3-mediated TGFbR pathway is established during differ-
entiation, but activation occurs only in response to a trigger, such
as wounding.
The urothelium functions as a urinary barrier, for which the
ability to repair (proliferation) and to provide a physical barrier
(differentiation) are both critical but conflicting attributes. In its
normal state, human urothelium is mitotically-quiescent, but
individual cells retain a high proliferative capacity. Whereas there
is evidence, particularly in the mouse, that paracrine signalling
from other tissue compartments such as the stroma may play a role
in driving urothelial repair [4], there is also evidence, shown here
and elsewhere [5] that at least in man, the urothelium functions
autonomously through autocrine signalling to regulate self-repair.
A pre-requisite for epithelial tissue wound repair is the release of
cells from the epithelial community to assume a migratory,
‘‘wound-healing’’ phenotype. This is achieved by dissolution of
tight junctions which, with ERK-mediated dissolution of adherens
junctions [25] is part of the EMT phenomenon mediated by
TGFb. In non-differentiated NHU cell culture, the Ca2+
concentration (0.09 mM) is below the threshold required for E-
cadherin homodimerisation, which constrains the formation of
adherens and tight junctions. Thus, NHU cells assume an EMT-
like phenotype, as evidenced by migratory behaviour, deposition
of fibronectin and expression of the cognate a5b1 integrin
receptor [26]. In such conditions, proliferating NHU cells
responded to exogenous TGFb by growth arrest and by inhibition
of migration in scratch wound repair. This cytostatic response is in
keeping with the recognised role of TGFb as a tumour suppressor
that promotes G1-cell cycle arrest through induction of the cyclin-
dependent kinase inhibitors [27,28].
Thus we provide a unifying hypothesis to explain the apparent
paradoxical effects of TGFbR signalling on epithelial repair and
differentiation in which the hardware and circuitry for autocrine
activation of the SMAD3-mediated TGFbR pathway is estab-
lished during differentiation, but activation occurs only in response
to a trigger, such as wounding.
Supporting Information
Figure S1 Influence of medium supplements on thebasal phosphorylation of SMAD3 in NHU cell cultures.NHU cells were grown in KSFMc or KSFM with no supplements,
with BPE alone (60 mg/ml) or EGF alone (6 mg/ml), all in the
presence or absence of SB431542 (3 mM). KSFMc with TGF-b1
(2 ng/ml) was used as a positive control for pSMAD3 activation.
Cell lysates (25 mg) were assessed by Western blot analysis as
described in the Materials and Methods. b-actin was used as an
internal loading control. Similar results were found with HeLa
cells (not shown).
(DOCX)
Table S1 Verification that differentiated NHU cellcultures used for Affymetrix arrays expressed estab-lished urothelial differentiation-associated genes. Anal-
ysis of marker gene expression from arrays performed at 144 h
post induction of differentiation by ABS/Ca2+ and TZ/PD
protocols compared to the autologous 24 h non-differentiated
control culture. Results expressed as log2 fold change. A minus
denotes a reduction in expression. The panel of marker genes
assessed were: PLK1. Cell cycle/proliferation marker. Cytoker-atins. Whereas KRT7 is expressed by all urothelial layers in situ
and showed no change following differentiation; KRT13, a
marker of transitional differentiation was upregulated and the
KRT14 squamous differentiation marker was downregulated [14].
Uroplakins. Urothelial differentiation was accompanied by
expression of uroplakin genes, which in human are restricted to
the terminally-differentiated superficial urothelial cells [2,13].
Claudins. Changes in tight junction composition accompany
urothelial differentiation, including expression of claudin 4 [12].
(DOC)
Table S2 Expression of TGFb ligands and probes takenfrom analysis of gene chip data. P = present; A = absent
(DOC)
Acknowledgments
The authors thank clinical colleagues for supplying urothelial tissues. R
Duke and J Hinley are thanked for excellent technical support.
Author Contributions
Conceived and designed the experiments: JMF CLV AW JH JS.
Performed the experiments: JMF SS CLV LAK. Analyzed the data:
JMF SS CLV LAK LKT JS. Wrote the paper: JMF CLV LKT JS.
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