Rhizobacterial bioformulation for the effective management of Macrophomina root rot in mungbean
Transcript of Rhizobacterial bioformulation for the effective management of Macrophomina root rot in mungbean
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Rhizobacterial bioformulation for the effectivemanagement of Macrophomina root rot in mungbean
Online Publication Date: 01 October 2007To cite this Article: Saravanakumar, D., Harish, S., Loganathan, M.,Vivekananthan, R., Rajendran, L., Raguchander, T. and Samiyappan, R. (2007)'Rhizobacterial bioformulation for the effective management of Macrophomina rootrot in mungbean', Archives Of Phytopathology And Plant Protection, 40:5, 323 - 337To link to this article: DOI: 10.1080/03235400600587326URL: http://dx.doi.org/10.1080/03235400600587326
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Rhizobacterial bioformulation for the effective managementof Macrophomina root rot in mungbean
D. SARAVANAKUMAR, S. HARISH, M. LOGANATHAN,
R. VIVEKANANTHAN, L. RAJENDRAN, T. RAGUCHANDER, &
R. SAMIYAPPAN
Department of Plant Pathology, Centre for Plant Protection Studies, Tamil Nadu Agricultural University,
Coimbatore, India
(Received 19 October 2005)
AbstractFluorescent pseudomonads based bioformulation was evaluated for their ability to controlMacrophomina root rot disease in mungbean (Vigna mungo). P. fluorescens isolate Pf1 showed themaximum inhibition in mycelial growth of Macrophomina phaseolina under in vitro conditions.Bioformulation of Pf1 with chitin was effective in reducing the root rot incidence in green gram bothunder glasshouse and field conditions. The rhizosphere colonization of P. fluorescens was observedappreciable with the green gram plants. However, Pf1 amended with chitin colonized effectively.Furthermore, the induction of defence-related enzymes and chemicals in plants by Pf1 amended with orwithout chitin and neem were tested. Increased accumulation of defence enzymes viz., phenylalanineammonia lyase (PAL), peroxidase (PO), polyphenol oxidase (PPO), chitinase, b-1,3-glucanse andphenolics were observed in Pf1 bioformulation amended with chitin, pre-treated plants challengeinoculated with M. phaseolina under glasshouse conditions. The present study reveals that in addition todirect antagonism and plant-growth promotion, PGPR strains amended with chitin bioformulationinduced defence-related enzymes and pathogenesis related (PR) proteins which collectively enhance theresistance in green gram against the infection of M. phaseolina.
Keywords: Defence enzymes, mungbean, Macrophomina phaseolina, pathogenesis related(PR) proteins, Pseudomonas fluorescens
Introduction
In a country like India where a large population is vegetarian, the cheap and best sources of
protein are pulses, among which mungbean or green gram (Vigna mungo) is an important
pulse, contributing 20% to overall world pulse production. It is severely affected by root rot
disease caused by the soil-borne plant pathogen Macrophomina phaseolina (Tassi) Goid.
and distributed worldwide causing disease on more than 500 hosts (Sinclair 1984). Its
destructive nature on many crop plants has been well documented (Dhingra & Sinclair
1978). It is one of the destructive plant pathogens known in the tropics and sub-tropics
Correspondence: D. Saravanakumar, Department of Plant Pathology, Centre for Plant Protection Studies, Tamil Nadu Agricultural
University, Coimbatore, India. Fax: 091 422 2431672. E-mail: [email protected]
Archives of Phytopathology and Plant Protection
October 2007; 40(5): 323 – 337
ISSN 0323-5408 print/ISSN 1477-2906 online ª 2007 Taylor & Francis
DOI: 10.1080/03235400600587326
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(Dhingra & Sinclair 1978). Hence, management of this disease with suitable measures has
become indispensable while considering the severe incidence of the disease. Though,
fungicides have shown promising results in controlling the disease, their use has recently been
restricted due to phytotoxicity and residue problems besides causing environmental pollution
and human health hazards. In this context, biocontrol approaches using PGPR strains help to
develop an eco-friendly control strategy for managing pathogens in crop plants.
The utilization of a plant’s own defence mechanism is a fascinating arena of research which
can be systemically activated upon exposure of plants to PGPR strains or infection by
pathogen (Baker et al. 1997). This phenomenon is called induced systemic resistance
(ISR) (Tuzun & Kuc 1991). This mechanism is facilitated by PGPR organism and
operates through the activation of multiple defence compounds at sites distant from the point
of pathogen attack (Dean & Kuc 1985). Among the PGPR, fluorescent pseudomonads are
the most exploited bacteria for biological control of soil-borne and foliar plant pathogens.
In addition to disease control, it promotes the growth and development of crop plants.
In the past three decades numerous strains of fluorescent pseudomonads have been
isolated from the rhizosphere soil and plant roots by several workers and their biocontrol
activity against soil-borne and foliar pathogens was reported (Vidhyasekaran & Muthamilan
1999; Nandakumar et al. 2001a,b; Vivekananthan et al. 2004). Fluorescent pseudomonads
are non-pathogenic rhizobacteria which suppress the soil-borne pathogens
through rhizosphere colonization, antibiosis (Pierson & Weller 1994), iron chelation by
siderophore production (Jagadeesh et al. 2001) and ISR (Van Loon et al. 1998).
Earlier studies indicated that seed treatment and soil application of P. fluorescens prevented
the pathogen infection and reduced the disease incidence (Ramamoorthy & Samiyappan
2001). However, the induction of defence-related enzymes by the regulation of PGPR strains
amended with chitin and their role in phenyl propanoid metabolism is limited. The present
study has been carried out to evaluate the efficacy of PGPR strains with or without the
addition of chitin against dry root rot pathogen incited by M. phaseolina both under glass-
house and field conditions. In addition, the induction of defence-related genes in conferring
resistance against the root rot pathogen under glasshouse conditions was studied.
Materials and methods
Isolation of pathogen and biocontrol agent
The root rot pathogen M. phaseolina was isolated from infected green gram roots of the
susceptible cultivar. Pseudomonas strains were isolated from the rhizosphere of green gram. In
addition, P. fluorescens (Pf-1) culture was obtained from the Department of Plant Pathology,
Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, India. Pure cultures of
fluorescent pseudomonads were maintained on KB slants at 48C.
In vitro testing of PGPR strains on inhibition of mycelial growth of M. phaseolina
PGPR strains were tested for their inhibition on mycelial growth of M. phaseolina by following
the dual culture technique (Dennis & Webster 1971). The bacterial culture was streaked at
one side of a Petri dish (1 cm from the edge of the plate) plated with PDA medium.
A mycelial disc (8 mm diameter) of seven days old culture of M. phaseolina was placed on
the opposite side in the Petri dish perpendicular to the bacterial streaks. The plates were
incubated at room temperature (28+ 28C) for four days. The mycelial inhibition of pathogen
was measured in millimeters when the fungus covered the full plate in control.
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Efficacy of PGPR strains on plant growth under laboratory conditions
Seed bacterization. P. fluorescens strains were grown in conical flasks (250 ml) containing
100 ml of KB broth for 48 h on a rotary shaker (150 rev min71) at 28+ 28C. Cells
were collected by centrifugation at 8000 rpm for 10 min at 48C and the pellet was
resuspended in a small quantity of sterile distilled water to get bacterial of population of
36 108 cfu/ml. Seeds of susceptible green gram (cv. Co6) were surface-sterilized with 2%
sodium hypochlorite for 30 sec, rinsed in sterile distilled water and dried overnight under a
sterile air stream. One gram of seeds with 100 mg of carboxy methyl cellulose (as adhesive
material) were soaked in 10 ml of bacterial suspension for 2 h and dried overnight in a sterile
Petri dish.
Plant growth promotion. Plant growth-promoting activity of PGPR strains was assessed based
on the seedling vigour index by the standard roll towel method (ISTA 1993). Three
replications were maintained for each treatment. The root length and shoot length of
individual seedlings were measured and the germination percentage of seeds was also
calculated. The vigour index was calculated by using the formula as described by Abdul Baki
and Anderson (1973):
Vigour Index ¼ ðMean root lengthþMean shoot lengthÞ �Germination ð%Þ:
Talc-based formulation. A loopful of P. fluorescens was inoculated into the KB and incubated in
a rotary shaker at 150 rpm for 72 h at room temperature (28+ 28C). After 72 h of
incubation, the broth containing 96 108 cfu/ml was used for the preparation of talc-based
formulation. To the 400 ml of bacterial suspension, 1 kg of sterilized talc-powder, 15 g
calcium carbonate (to adjust the pH to neutral) and 10 g carboxymethyl cellulose (adhesive)
were mixed and dried under shade for 12 h as described by Vidhyasekaran and Muthamilan
(1995).
Chitin amendment with talc-based formulation of P. fluorescens. A total of 5 g of crab shell chitin
was slowly added into 100 ml of cold 0.25 N HCL with vigorous stirring and kept overnight at
48C. The mixture was filtered through glass wool into 200 ml of ice cold ethanol at 48C with
rapid stirring. The resultant chitin suspension was centrifuged at 1000 rpm for 20 min and
the chitin pellets were washed repeatedly with distilled water until pH becomes neutral. The
concentration of colloidal chitin was adjusted to 10 mg per ml by gravimetric dry method
analysis. Colloidal chitin was incorporated into KB broth at 1% (v/v). After sterilization,
P. fluorescens was inoculated in KB broth and incubated at room temperature (28+ 28C) for
72 h. The bioformulation was prepared with the 400 ml culture grown in chitin amended KB
medium, 1 kg of talc-powder, calcium carbonate 15 g and carboxymethyl cellulose 10 g as
described by Radjacommare et al. (2004).
Neem amendments with talc-based formulation of P. fluorescens. Seeds from mature dehisced
fruits of Azadirachta indica were oven dried for 2 days at 608C. The seeds were ground using
liquid nitrogen in pestle and mortar. The powdered neem was extracted with cold distilled
water (Amadioha 2000). One ml of neem seed kernel extract was added into 100 ml of King’s
B broth. After sterilization, P. fluorescens (Pf1) was inoculated into neem-based media,
incubated in a shaker and prepared formulations. P. fluorescens amended with chitin and neem
bioformulation were prepared by adding the equal quantity of Pf1 þ chitin and Pf1 þ neem-
amended broth with the talc powder.
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Glasshouse study
Treatment of bioformulation. Seeds were soaked in double the volume of sterile distilled water
containing talc-based formulation (10 g/kg of seed). After 24 h, the suspension was drained
off and the seeds were dried under shade for 30 min and used for sowing (Vidhyasekaran et al.
1997a). Carbendazim at 2 g/kg of seed was applied as chemical treatment. Five g of talc-based
formulation per kg of soil was added 30 days after sowing. Carbendazim at 0.1% was applied
as soil-drench to the pots.
Pathogen inoculation. Pure culture of the pathogen obtained by single hyphal tip method was
used for inoculating plants (Rangaswami 1972). Sand-maize medium containing sand and
maize at 19:1 respectively was sterilized at 1218C, 15 psi for 2 h. M. phaseolina was inoculated
in sand-maize medium and incubated for 15 days at room temperature 28+ 58C for
multiplication (Riker & Riker 1936). Potting soil (redsoil:sand:cowdung manure at 1:1:1 w/w/
w) was autoclave sterilized at 1218C, 15 psi for 2 h in two consecutive days. The potting soil
incorporated with the pathogen was filled in 30-cm diameter pots. Seeds of green gram
treated with different bioformulations were sown at 20 seeds per pot separately. The pots were
watered at weekly intervals and observations were made 30 days after sowing.
Disease and yield assessment. The percent disease incidence (PI) was assessed using the
following formula:
PI ¼ Number of infected plants
Total number of seeds sown� 100
The yield attributing parameters, viz., number of pods/plant, number of seeds/pod, root
nodulations, root length and shoot length were recorded. Pulse grain yield recorded after
harvesting the crop.
Protein analysis. Protein content in the green gram root extracts were determined by the
method of Bradford (1976). Ten milligram of Coomassie brilliant blue G-250 were dissolved
in 4.7 ml of absolute alcohol and 10 ml of concentrated phosphoric acid and the volume was
made up to 100 ml with distilled water. A sample of 50 ml added to 950 ml of dye solution
and the mixture was incubated for 5 min at room temperature. The absorbance recorded
at 595 nm in GS5703 AT spectrophotometer. Bovine serum was albumin used as the standard.
Enzyme extraction
Green gram root samples were taken at 7 days interval starting from 0 day to 49 days after
inoculation of pathogen in the plants pretreated with and without Pseudomonas bioformula-
tions. Four plants were sampled from each replication of the treatment for analysis. One g of
root sample was homogenized with 2 ml of 0.1 M sodium citrate buffer (pH 5.0) at 48C.
The homogenate was centrifuged for 20 min. at 10000 rpm. The supernatant was used as
crude enzyme extract for assaying chitinase activity. Enzyme extracted with 0.1 M sodium
phosphate buffer (pH 7.0) was used for the estimation of peroxidase (PO), polyphenol
Oxidase (PPO) and phenylalanine ammonia lyase (PAL).
Phenylalanine ammonia lyase (PAL). The PAL assay was carried out as per the method
described by Ross and Sederoff (1992). The assay mixture containing 100 ml of
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enzyme, 500 ml of 50 mM Tris HCl (pH 8.8) and 600 ml of 1 mM L-phenylalanine was
incubated for 60 min and the reaction was arrested by adding 2 N HCl. To the mixture,
1.5 ml of toluene was added, vortexed for 30 sec and centrifuged (1000 rpm, 5 min, 48C).
The toluene fraction containing trans-cinnamic acid was separated and measured at 290 nm
against toluene as toluene the blank. Standard curve for comparison was drawn with cinnamic
acid in toluene. The enzyme activity was expressed as nmoles of cinnamic acid min71 mg71
of protein.
Peroxidase (PO). Assay of PO activity was carried out as per the procedure described by
Hammerschmidt et al. (1982). The reaction mixture consisted of 2.5 ml of mixture
containing 0.25% (v/v) guaiacol in 0.01 M sodium phosphate buffer, pH 6.0 and 0.1 M
hydrogen peroxide. Enzyme extract (0.1 ml) was added to initiate the reaction and read at
470 nm. The boiled enzyme preparation served as blank. Activity was expressed as the
increase in absorbance at 470 nm min71 mg71 of protein.
Polyphenol oxidase (PPO). PPO activity was determined as per the procedure given by Mayer
et al. (1965). The reaction mixture consisted of 1.5 ml of 0.1 M sodium phosphate buffer (pH
6.5) and 200 ml of the enzyme extract. The reaction was started with 0.5ml of 0.01 M catechol
and the activity was expressed as changes in absorbance (in units) min71 mg71 of protein.
Phenolics content. Phenol content was estimated as per the procedure given by Zieslin and Ben-
Zaken (1993). One gram of tissue was homogenized in 10 ml of 80% methanol and agitated
for 15 min at 708C. One ml of the methanol extract was added to 5 ml of distilled water and
250 ml of Folin Ciocalteau reagent (1 N) and the solution was kept at 258C. After 3 min, 1 ml
of saturated Na2CO3 and 1 ml of distilled water was added and the reaction mixture was
incubated for 1 h at 258C. The absorption of the developed blue colour was measured using
GS 5703 AT spectrophotometer at 725 nm. The content of the total soluble phenols was
calculated according to a standard curve obtained from with catechol and expressed as
catechol equivalents mg71 of protein.
Chitinase. The colorimetric assay of chitinase was carried out as per Boller and Mauch (1988).
The reaction mixture consisted of 10 ml of 0.1 M sodium acetate buffer (pH 4.0), 0.4 ml
enzyme solution and 0.1 ml colloidal chitin (10 mg/ml). After incubation for 2 h at 378C,
the reaction was stopped by centrifugation at 1000 rpm for 3 min. An aliquot of the
supernatant (0.3 ml) was pipetted into a glass reagent tube containing 30 ml of 1 M potassium
phosphate buffer (pH 7.0) and incubated with 20 ml of 3% (w/v) snail gut enzyme. After 1 h,
the reaction mixture was brought to pH 8.9 by the addition of 70 ml of 0.1 M sodium borate
buffer (pH 9.8). The mixture was incubated in a boiling water bath for 3 min and then rapidly
cooled in an ice-water bath. Two ml of DMAB was added to the mixture, incubated
for 20 min at 378C and immediately thereafter the absorbance was measured at 585 nm.
N-acetylglucosamine (GlcNac) was used as a standard. The enzyme activity was expressed as
nmoles GlcNac equivalents min71 mg71 of protein.
b-1,3-glucanase. b-1,3-glucanase activity was assayed according to Pan et al. (1991).
The reaction mixture consisted of 62.5 ml of 4% laminarin and 62.5 ml of enzyme extract.
The reaction was carried out at 408C for 10 min. The reaction was then stopped by adding
375 ml of dinitrosalicylic acid and heated for 5 min in boiling water, vortexed and the
absorbance was measured at 500 nM. The enzyme activity was expressed as mg glucose
released min71 mg71 protein.
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Population density
Soil samples were randomly collected from the green gram rhizosphere treated with various
bioformulations and population dynamics were analysed on 30, 45 and 60 days after sowing.
Population of Pseudomonas per g of soil was assessed using serial dilution technique.
Field study
Treatments of bioformulations. Seeds were soaked in double the volume of sterile distilled water
containing talc-based formulation (10 g/kg of seed). After 24 h, the suspension was drained off
and the seeds were dried under shade for 30 min and used for sowing (Vidhyasekaran et al.
1997a). Carbendazim at 2 g/kg of seed was applied as chemical control. In field, biocontrol
agents were applied at 2.5 kg/ha on 30 days after sowing (DAS) and carbendazim at 0.1% was
applied as soil-drench.
Disease and yield assessment. From each plot, 1 m2 area was selected randomly from three
locations. Total number of plants and infected plants were taken into account and the per
cent disease incidence (PI) was calculated using the following formula:
PI ¼ Number of infected plants
Total number of plants� 100
The yield attributing parameters, viz., number of pods/plant, number of seeds/pod were
recorded. The grain yield per ha was calculated.
Statistical analysis. The glasshouse and field trial data were analysed using the IRRISTAT
version 92-1 programme developed by the biometrics unit, International Rice Research
Institute, The Philippines. Percentage infection, growth and yield data were analysed
independently by trial. Data were subjected to analysis variances (ANOVA). Disease
incidence data were arcsine transformed before analysis. The treatment means were
compared by Duncan’s Multiple Range test (DMRT) (Gomez & Gomez 1984).
Results
In vitro screening of the PGPR strains against the pathogen
Different strains of PGPR were tested against the mycelial growth of M. phaseolina. Among
the different PGPR strains, P. fluorescens Pf1 showed the highest inhibition of M. phaseolina
with per cent inhibition of 44.55 whereas in case of PfG2 per cent inhibition was 8.44
(Table I) (Figure 1).
Efficacy of PGPR strains on plant-growth promotion
Green gram seeds treated with the different bacterial suspensions showed improvement
in plant growth parameters over untreated seeds. Pseudomonas fluorescens isolates (Pf1,
PfG1 and PfG2) were found to increase the vigour index of green gram seedlings
significantly. The increase in mean root length (12.3 cm) and shoot length (11.5 cm) due
to P. fluorescens Pf1 was significantly higher compared to the seedlings from untreated
control. The maximum vigour index of 2372 was observed in green gram seedlings treated
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with Pf1 suspension and less vigour index of 1191 was recorded from untreated control
(Table II).
Glasshouse experiments
The PGPR strain which showed significantly higher vigour index and inhibition over the
mycelial growth of M. phaseolina were selected and screened against dry root rot disease
under glasshouse conditions. Among the different combinations of bioformulations used,
application of Pf1 with chitin as seed treatment and soil application resulted in less root rot
Table I. Efficacy of PGPR strains in inhibiting mycelial growth of M. phaseolina.
Treatments
Mycelial growth
of pathogen (mm)
Percent
inhibition
P. fluorescens (Pf1) 49.9 44.55a
Pf G1 62.5 31.11b
Pf G2 82.4 8.44c
Control 90.0 0.00d
Values are mean of four replications; In a column, means followed by a common letter are not significantly different
(p¼0.05) by DMRT.
Figure 1. In vitro antibiosis of PGPR strain Pf1 against M. phaseolina.
Table II. Effect of seed treatment with PGPR strains on growth attributes of green gram.
Treatments
MSL
(cm)
MRL
(cm)
Germination
(%)
Vigour
index
Percent
increase
over control
P. fluorescens (Pf1) 12.3a 11.5a 99.7a (86.99) 2372.86a 99.08
Pf G1 8.1b 7.6b 93.7b (75.46) 1471.09b 18.96
Pf G2 8.2b 7.8b 93.0b (74.65) 1488.00b 24.93
Control 7.2c 6.5c 87.0c (68.58) 1191.9c –
MSL, Mean shoot length; MRL, Mean root length; Values in parentheses are arcsine transformed; In a column,
means followed by a common letter are not significantly different (p¼ 0.05) by DMRT.
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incidence of 0.0, 2.5 and 7.5% at 30, 45 and 60 days after sowing (DAS) respectively which
showed significant different from the untreated control plants (Table III).
The biometrical observations were taken at 30, 45 and 60 days after sowing. Again Pf1 with
chitin showed significantly higher root and shoot length throughout the study period
(Table IV). Higher yield was recorded in P. fluorescens Pf1 amended with chitin (9.25 g/plant)
bioformulation followed by Pf1 combination with chitin and neem (7.10 g/plant). Untreated
control recorded the lowest yield of 3.06 g/plant. The yield parameters, viz., number of seeds,
number of pods per plant were found to be higher in the bioformulation of Pf1 amended with
chitin treatments and recorded 201.63% yield increase over the untreated control (Table V).
Table III. Chitin amended rhizobacterial efficacy on root rot incidence of green gram under glasshouse conditions.
Treatments 30 DAS 45 DAS 60 DAS Mean
Percent
reduction
over control
Pf1 2.5b (9.05) 7.5b (15.88) 12.5c (20.70) 7.5b 74.20
Pf1þChitin (C) 0.0a (0.00) 5.0a (12.90) 7.5a (15.88) 4.1a 85.62
Pf1þNeem (N) 2.5b (9.05) 12.5d (20.70) 17.5e (24.72) 10.8d 62.78
Pf1þCþN 2.5b (9.05) 10.0e (18.42) 10.0b (18.42) 7.5c 74.20
Carbendazim 0.0a (0.00) 5.0a (12.90) 7.5a (15.88) 4.1a 85.62
Control 15.0c (22.78) 25.0f (29.99) 47.5g (43.56) 29.1f 0.00
DAS, Days After Sowing; Values in parentheses are arcsine transformed; In a column, means followed by a common
letter are not significantly different (p¼ 0.05) by DMRT.
Table V. Chitin amended rhizobacterial effect on yield of green gram under greenhouse conditions.
Treatments
Number of
seeds/pod
Number of
pods/plant
Grain yield
(g/plant)
Percent increase
over control
Pf1 (P) 12.5bc 14.5b 6.25c 104.24
Pf1þChitin (C) 15.5a 16.5a 9.23a 201.63
Pf1þNeem (N) 10.0c 13.0cd 4.20d 37.25
Pf1þCþN 13.5b 15.0ab 7.10ab 132.02
Carbendazim 12.5bc 12.0d 5.00d 63.39
Control 9.0d 8.5e 3.06e 0.00
Values in parentheses are arcsine transformed; In a column, means followed by a common letter are not significantly
different (p¼0.05) by DMRT.
Table IV. Chitin amended rhizobacterial effect on plant biometrics of green gram under glasshouse conditions.
30 DAS 45 DAS 60 DAS
Treatments
Root
length (cm)
Shoot
length (cm)
Root
length (cm)
Shoot
length (cm)
Root
length (cm)
Shoot
length (cm)
Pf1 (P) 13.4bc 38.7cd 15.1c 48.1de 18.2c 55.2ef
Pf1þChitin (C) 16.2a 42.3a 18.4a 53.9a 22.8a 67.9a
Pf1þNeem (N) 12.5d 36.8de 15.2d 47.1cd 18.2c 54.6de
Pf1þCþN 15.7a 40.2ab 17.5b 49.9b 20.3b 60.2bc
Carbendazim 11.24e 31.4f 13.2e 40.7f 16.8d 52.6f
Control 8.5f 26.8g 11.0f 35.1g 14.0e 46.9g
Values are mean of four replications; In a column, means followed by the same letter are not differ significantly (p¼0.05)
by DMRT.
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P. fluorescens colonization in rhizosphere of green gram
The survival of P. fluorescens strain Pf1 was estimated from the rhizosphere of green gram at
30, 45 and 60 DAS. The maximum population of P. fluorescens (cfu) was recorded in
the treatment Pf1 with chitin. Pf1 with chitin and neem was observed to the next best
treatment for the survival and colonization of Fluorescent pseudomonads and less bacterial
population was recorded in untreated control (Table VI).
Field experiments
Efficacy of bioformulations on dry root rot of green gram. Field experiments revealed the minimum
root rot incidence of 1.3, 2.6 and 9.3% in the trial plots applied with the bioformulation of
P. fluorescens Pf1 amended with chitin at 30, 45 and 60 DAS respectively. Though Pf1 alone
significantly reduced the disease incidence when compared to untreated control, its
amendment with chitin showed highest percent reduction (82.13) in disease control followed
by Pf1 amended with chitin and neem (69.55) (Table VII).
Efficacy of PGPR strains on yield of green gram. A significantly higher number of seeds per pod
and number of pods per plant were recorded from the trial plots treated with Pf1 along with
chitin followed by Pf1 in combination with chitin and neem bioformulation. The parameters
were positively correlated with the grain yield. Pf1 mixed with chitin treated plots recorded
Table VII. Chitin amended rhizobacterial efficacy on dry root rot of green gram under field conditions.
Treatments 30 DAS 45 DAS 60 DAS Mean
Percent reduction
over control
Pf1 (P) 2.6b (9.27) 5.3c (13.30) 16.0d (23.57) 7.96c 67.65
Pf1þChitin (C) 1.3a (6.53) 2.6a (9.27) 9.3a (17.75) 4.40a 82.13
Pf1þNeem (N) 4.0c (11.53) 6.6d (14.88) 18.6e (25.54) 9.73e 60.48
Pf1þCþN 2.6b (9.27) 5.3c (13.30) 14.6c (22.45) 7.50d 69.55
Carbendazim 1.3a (6.53) 4.0b (11.53) 13.3b (21.38) 6.20b 74.83
Control 11.3a (19.64) 20.0e (26.56) 42.6f (40.74) 24.63f 0.00
Values are mean of four replications; Values in parentheses are arcsine transformed; In a column, means followed by
the same letter are not differ significantly (p¼ 0.05) by DMRT.
Table VI. Rhizosphere colonization of P. fluorescens on green gram roots under green house conditions.
Pseudomonas population/g of soil (6106)
Treatments 30 DAS 45 DAS 60 DAS
Pf1 7.14c 8.91c 8.01c
Pf1þChitin (C) 8.54a 9.85a 9.20a
Pf1þNeem (N) 5.91d 6.24d 5.92d
Pf1þCþN 7.24b 9.01b 8.62b
Carbendazim 4.02e 5.91e 5.51e
Control 1.96f 3.83f 3.61f
Values are mean of four replications; In a column, means followed by the same letter are not differ significantly (p¼0.05)
by DMRT.
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the highest yield of 1218 kg/ha which is significantly different from all other treatments
including chemical treatment (800 kg/ha) and lower yield was recorded in the untreated
control plots (583 kg/ha). In general, all the treatments were effective in increasing the
grain yield of green gram and Pf1 combination with chitin maintained its superiority both
in increasing the yield and in reducing the disease incidence over the untreated control
(Table VIII).
PGPR-induced defence-related protein and chemicals against the root rot pathogen. The induction
of defence enzymes, viz., PO and PPO activity in green gram was studied at 7 days interval
starting from 0 – 49 days after challenge inoculation with M. phaseolina pretreated with Pf1
amended chitin bioformulation. The enzyme activity was increased up to 21 days after
challenge inoculation and the maximum induction was observed during this period. The
enzyme activity declined at 35 days after challenge inoculation in PGPR-treated plants. In
control plants, the enzyme activity started declining drastically from 21 days after challenge
inoculation (Figures 2a, 2b). The PAL enzyme activity induced by Pf1 along with chitin
bioformulation reached the maximum at 35 days after challenge inoculation and thereafter it
decreased. Moreover, PAL activity was significantly higher in PGPR treatment when
compared to untreated control (Figure 2c).
Higher levels of accumulation of phenolics was observed in green gram roots up to 28 days
in plants treated with the bioformulation of Pf1 with chitin after challenge inoculated with
M. phaseolina. In PGPR untreated plants increased phenolic content was noticed up to
21 days after challenge inoculation and thereafter it decreased drastically and remained at
lower levels throughout the experimental period (Figure 2d).
The activity of lytic enzymes such as chitinase and b-1,3-glucanse was observed at higher
levels in roots of green gram plants pretreated with Pf1 bioformulation containing chitin after
challenge inoculation with root rot pathogen. The maximum activity was recorded at 21 days
after challenge inoculation and it started decline 35 days after challenge inoculation towards
the end of experiment. Indeed, the activity was significantly higher in Pf1 with chitin treat-
ment than the untreated control (Figures 2e, 2f).
Discussion
The development of biological techniques using PGPR amended with suitable mixture
bioformulations is an emerging arena in crop protection to reduce the damage caused by plant
pathogens in economically important crops. Production of antibiotics, viz., HCN,
Table VIII. Chitin amended rhizobacterial effect on yield of green gram under field conditions.
Treatment
Number of
seeds/pod
Number of
pods/plant
Grain
yield (kg/ha)
Percent
increase
over control
Pf1 10.33c 15.33c 889c 52.48
Pf1þChitin (C) 14.66a 19.66a 1218a 108.91
Pf1þNeem (N) 9.33d 14.33d 857d 46.90
Pf1þCþN 12.33b 17.33b 984b 68.78
Carbendazim 9.33d 13.66e 800e 37.22
Control 8.66e 9.33f 583f –
Values are mean of four replications; In a column, means followed by the same letter are not differ significantly (p¼0.05)
by DMRT.
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pyrrolnitrin, phenazine and 2,4-diacetyl phloroglucinol and lytic enzymes by P. fluorescens
against fungal pathogens were reported by many workers (Ramamoorthy & Samiyappan
2001; Viswanathan & Samiyappan 2001b). The above facts suggest that the inhibition of root
rot pathogen, M. phaseolina by P. fluorescens Pf1 may be due to the production of antibiotics,
siderophore mediated competition and lytic enzymes, viz., chitinase, b-1,3-glucanase which
degraded the fungal cell wall and restricted the growth of fungus under in vitro conditions.
The vigour index of green gram plants was conspicuously increased on Pf1 treatment.
Many workers have evidenced that Pseudomonas spp. has the ability to produce IAA, which is
effective for plant growth promotion (Kumar Dileep & Dube 1992; O’Sullivan & O’Gara
1992). The ipdc gene encodes for indolepyruvate decarboxylase, a key enzyme in the
indolepyruvic acid pathway, was isolated from Pseudomonas putida GR12-2 and revealed
Figure 2. Induction of defence enzymes in PGPR (strain Pf1) treated green gram plants challenge inoculated with
M. phaseolina. (a) Peroxidase; (b) Polyphenol oxidase; (c) PAL; (d) Phenolics; (e) Chitinase; (f) b-1,3-glucanase.
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the impact of bacterial IAA in the development of the host plant root system (Patten &
Glick 2002).
In addition, PGPR increased plant growth directly by mediating the production of
secondary metabolites and phytohormones such as auxins, cytokinins or gibberellic acid
(Arshad & Frankenberger 1991; Beyeler et al. 1999) or indirectly either by suppression of
well-known diseases caused by major pathogens or by reducing the deleterious effects of
minor pathogens (Schippers et al. 1987). Glick and Bashan (1997) reported the role of ACC
deaminase from Pseudomonas in reducing the production of ethylene during stress conditions.
Plant-growth promotion by PGPR strain Pf1 in green gram seedlings might have attributed to
the induction of plant-growth hormones and suppression of deleterious pathogens or a
combination of both from the rhizosphere and spermosphere.
Seed treatment and soil application of bioformulation Pf1 amended with chitin reduced the
disease incidence of Macrophomina root rot and increased the yield both under glasshouse and
field conditions. Chitin has wider applications against various fungal pathogens (Chirkov
2002) and this justifies its use as an amendment in bioformulation mixture in the present
study. Chitin amendment increased the growth and multiplication of chitinolytic microflora
(Bell et al. 1998). Viswanathan and Samiyappan (2001a) reported that when chitin was
substituted with glycerol as a carbon source, it resulted in enhanced growth and
multiplication of pseudomonads. Yuen et al. (2001) also found that incorporation of chitin
in the medium increased bacterial population when compared to the non-chitin amended
medium and improved the efficiency of PGPR strains in reducing the severity of rust disease
in bean plants. Chitin amendment of soil may have effects in the rhizosphere, such as the
stimulation of growth of chitinolytic microorganisms (De Boer et al. 1999; Ahmed et al.
2003), their increased biocontrol activity and elicitation of plant defense proteins (Bharathi
et al. 2004). All these effects may culminate in enhancing plant protection.
Higher level expression of defence-related proteins and timely accumulation of chemicals at
the infection site certainly prevent the colonization of pathogen in green gram seedlings
treated with the bioformulation amended with chitin. PGPR strains induce the defence-
related enzymes, viz., phenylalanine ammonia lyase (PAL) that is involved in catalyzing the
deamination of L-phenylalanine to trans-cinnamic acid, which is the first step in the
biosynthesis of large class of plant secondary metabolites including phenolic compounds and
phytolexins. The maximum accumulation of PAL at 21 days of challenge inoculation
coincides with the time which is normally favourable for the pathogen to infect green gram
plants. The increased activity of PAL constituted for enhancing the resistance in green gram
plants against fungal pathogen, M. phaseolina. Induction of PAL by fluorescent pseudomo-
nads was reported in cucumber against P. aphanidermatum (Chen et al. 2000), tomato against
F.oxysporum f. sp. lycopersici (Ramamoorthy et al. 2002) and bean against Botrytis cinerea
(Zdor & Anderson 1992).
Peroxidase (PO) and polyphenol oxidase (PPO) is involved in the formation of lignin to
restrict the entry and movement of fungal pathogens in the plant system. Increased PO and
PPO activity has been shown in a number of resistant interactions involving plant pathogenic
fungi, bacteria and viruses (Chen et al. 2000; Nandakumar et al. 2001a,b; Kandan et al.
2002). Peroxidases have been implicated in a number of physiological functions that may
contribute to resistance including exudation of hydroxy-cinnamyl alcohol into free radical
intermediates (Gross 1980), phenol oxidation (Schmidt & Feucht 1980), polysaccharide cross
linking (Fry 1986), cross linking of extensin monomers (Everdeen et al. 1988) and
lignification (Walter 1992) and also associated with deposition of phenolic compounds into
plant cell walls during resistant interactions (Graham & Graham 1991). Phenolic compounds
enhance the mechanical strength of host cell wall and also inhibit the invading pathogenic
334 D. Saravanakumar et al.
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organisms. Seed treatment with P. fluorescens 63 induced the accumulation of phenolics in
tomato root tissue (M’Piga et al. 1997).
Other defence enzymes include pathogenesis related proteins such as b-1,3-glucanase and
chitinases which degrade the fungal cell wall and cause lysis of fungal cell. Chitin and glucan
oligomers released during degradation of fungal cell wall act as elicitors that elicit various
defence mechanisms in the plants. In general, fungal cells contain chitin and glucan as their
cell wall constituents. The main mode of antagonistic activity of microbes is production of
lytic enzymes (chitinases and b-1,3-glucanases) which act on cell walls of organisms with
chitin and glucan as their cell wall component (Singh et al. 1999) and also through induced
systemic resistance (Van Loon et al. 1998) in plant systems.
In field experiments, the talc-based bioformulation mixture containing Pf1 along with chitin
showed significantly less disease incidence and correspondingly resulted in enhanced yield
(Nandakumar et al. 2001a; Ahmed et al. 2003; Bharathi et al. 2004). P. fluorescens Pf1 along
with chitin amendment was effective for survival and colonization of bacteria under field
conditions. The colonization ability of Pf1 was correlated with its competitive ability against the
deleterious organisms thereby inhibiting the colonization of pathogenic organisms around the
plant system. Root colonization by rhizobacteria appears to be an important factor in plant
growth promotion and biological control (Knudsen et al. 1997; Roberts et al. 1999). Jayashree
et al. (2000) reported that disease suppression by fluorescent pseudomonads depends on its
ability to colonize rhizosphere. The colonization of roots by inoculated bacteria is an important
step in the interaction between beneficial bacteria and the host plant to reduce the attack of
deleterious pathogen (Benizri et al. 2001). The present study implies that direct and indirect
mechanisms of chitin-based rhizobacterial bioformulation are associated with the reduction in
disease incidence of root rot in green gram plants both under glasshouse and field conditions.
Hence, enhancement of disease resistance by developing newer bioformulation, viz., chitin
amended rhizobacteria requires intensive research in the field of plant disease management.
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