Module Catalog - TUM School of Life Sciences

TUM School of Life Sciences Technische Universität München

Module Catalog

M.Sc. TUM School of Life SciencesTechnische Universität München

www.tum.de/www.wzw.tum.de/index.php?id=2&L=1

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Module Catalog: General Information and Notes to the Reader

What is the module catalog?One of the central components of the Bologna Process consists in the modularization of universitycurricula, that is, the transition of universities away from earlier seminar/lecture systems toa modular system in which thematically-related courses are bundled together into blocks, ormodules. This module catalog contains descriptions of all modules offered in the course of study.Serving the goal of transparency in higher education, it provides students, potential students andother internal and external parties with information on the content of individual modules, the goalsof academic qualification targeted in each module, as well as their qualitative and quantitativerequirements.

Notes to the reader:

Updated InformationAn updated module catalog reflecting the current status of module contents and requirements ispublished every semester. The date on which the module catalog was generated in TUMonline isprinted in the footer.

Non-binding InformationModule descriptions serve to increase transparency and improve student orientation with respectto course offerings. They are not legally-binding. Individual modifications of described contentsmay occur in praxis. Legally-binding information on all questions concerning the study program and examinationscan be found in the subject-specific academic and examination regulations (FPSO) of individualprograms, as well as in the general academic and examination regulations of TUM (APSO).

Elective modulesPlease note that generally not all elective modules offered within the study program are listed in themodule catalog.

Module Catalog of the study program M.Sc. Generated on 18.01.2021

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Index of module handbook descriptions (SPO tree)Alphabetical index can be found on page 105

[20191] Horticultural Science | Masterstudium Horticultural ScienceRequired Courses | Required Courses 6

[WZ1671] Crop Physiology: Growth and Development of Plants | CropPhysiology: Growth and Development of Plants

6 - 7

[WZ1672] Crop Quality: Basics of Quality Control and Assurance | CropQuality: Basics of Quality Control and Assurance

8 - 9

Elective Courses | Elective Courses 10[WZ2619] Research Project: in silico Evolutionary Genetics of Plants andPathogens | Forschungspraktikum: in silico Evolutionsgenetik von Pflanzenund Pathogenen

10 - 11

[WZ6428] Analytical Methods in Horticulture, Agriculture and PlantBiotechnology | Analytical Methods in Horticulture, Agriculture and PlantBiotechnology

12 - 13

[WZ2620] Applications of Evolutionary Theory in Agriculture: PopulationGenomics of Crop Pathogens and Disease Management | Applications ofEvolutionary Theory in Agriculture: Population Genomics of Crop Pathogensand Disease Management

14 - 16

[CS0154] Computational Biology and Functional Genomics |Computational Biology and Functional Genomics

17 - 18

[WZ3098] Basics of Metabolomics | Basics of Metabolomics 19 - 21[WZ6429] Biotechnology in Horticulture | Biotechnology in Horticulture 22 - 23[WZ1673] Crop Biotechnology | Crop Biotechnology 24 - 25[WZ1720] Crop Breeding | Crop Breeding 26 - 27[WZ1696] Crop Genomics | Crop Genomics 28 - 29[WZ1588] Evolutionary Genetics of Plants and Microorganisms |Evolutionary Genetics of Plants and Microorganisms

30 - 31

[WZ6430] Genetic and Environmental Control of Vegetal Plants | Geneticand Environmental Control of Vegetal Plants

32 - 33

[WZ1035] Host-Parasite-Interaction | Host-Parasite-Interaction 34 - 35[WZ1545] Human Resource Management in Agriculture and RelatedIndustries | Human Resource Management in Agriculture and RelatedIndustries

36 - 37

[WZ1589] Marker-assisted Selection | Marker-assisted Selection 38 - 39[WZ2049] Methods for Analysis of Next Generation Sequencing data |Methods for Analysis of Next Generation Sequencing data

40 - 41

[WZ6431] Model Systems and Crop Quality | Model Systems and CropQuality

42 - 43

[WZ8128] Methods of Genome Analysis | Methoden der Genomanalyse 44 - 46


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[WI001205] People in Organizations: Managing Change andSustainability in Agribusiness and the Food Industry | People inOrganizations: Managing Change and Sustainability in Agribusiness and theFood Industry

47 - 49

[WZ2581] Plant Biotechnology | Pflanzenbiotechnologie 50 - 51[WZ2480] Plant Developmental Genetics 2 | Plant Developmental Genetics2

52 - 53

[WZ1185] Plant Epigenetics and Epigenomics | Plant Epigenetics andEpigenomics

54 - 55

[WZ0047] Plant Stress Physiology | Plant Stress Physiology 56 - 57[WZ2400] Practical Course: Computing for Highthroughput Biology |Forschungspraktikum Computeranwendungen für Hochdurchsatz-Biologie

58 - 59

[WZ1578] Project Management in Molecular Plant Biotechnology | ProjectManagement in Molecular Plant Biotechnology

60 - 61

[WZ1584] Quantitative Genetics and Selection | Quantitative Genetics andSelection

62 - 63

[WZ1674] Research Methods and Economic Research Project | ResearchMethods and Economic Research Project

64 - 66

[WZ1577] Research Project 'Biotechnology of Horticultural Crops' |Research Project 'Biotechnology of Horticultural Crops'

67 - 68

[WZ1575] Research Project 'Chemical Genetics' | Research Project'Chemical Genetics'

69 - 71

[WZ1718] Research Project 'Horticultural Economics and Management' |Research Project 'Horticultural Economics and Management'

72 - 73

[WZ1697] 'Research Project 'Metabolite Analyses in Crops' | 'ResearchProject 'Metabolite Analyses in Crops'

74 - 76

[WZ2401] Research Project 'Molecular Plant Breeding' |Forschungspraktikum Molekulare Pflanzenzüchtung

77 - 78

[WZ1576] Research Project 'Plant Growth Regulation' | Research Project'Plant Growth Regulation'

79 - 81

[WZ1549] Research Project 'Plant Nutrition' | Research Project 'PlantNutrition'

82 - 83

[WZ1921] Strategy, Supply Chain Management, and Sustainability inAgribusiness and Food Industry | Strategy, Supply Chain Management, andSustainability in Agribusiness and Food Industry

84 - 86

[WZ1567] Sustainability: Paradigms, Indicators, and MeasurementSystems | Sustainability: Paradigms, Indicators, and Measurement Systems

87 - 89

[WZ2763] Transcriptional and Posttranscriptional Regulation inEukaryotes | Transcriptional and Posttranscriptional Regulation in Eukaryotes

90 - 92

Requirement Proof of Proficiency in German | Nachweis Deutschkenntnisse 93[SZ03031] Intensive Course German as a Foreign Language A2.1 |Blockkurs Deutsch als Fremdsprache A2.1

93 - 95


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[SZ0302] German as a Foreign Language A1.2 | Deutsch als FremdspracheA1.2

96 - 97


98 - 99


100 - 101

[SZ0322] German as a Foreign Language A2.1 plus A2.2 | Deutsch alsFremdsprache A2.1 plus A2.2

102 - 104


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WZ1671: Crop Physiology: Growth and Development of Plants | Crop Physiology: Growth and Development of Plants

Required Courses | Required Courses

Module Description

WZ1671: Crop Physiology: Growth and Development of Plants | CropPhysiology: Growth and Development of Plants

TUM School of Life Sciences

Version of module description: winterterm 2018/19

Module Level:Master

Language:English

Duration:one semester

Frequency:winter semester

Credits:*6

Total Hours:180

Self-study Hours:120

Contact Hours:60

Number of credits may vary according to degree program. Please see Transcript of Records.

Description of Examination Method:Students demonstrate their ability to understand the physiological processes affecting horticulturalcrop production and to evaluate limiting factors during the different growth stages of vegetableand ornamental cultures by answering comprehension questions and solving sample problemsin a written examination (120 min). Furthermore, students will be tested for their ability to outlinecultivation-specific and genetic approaches to improve qualitative and quantitative yield traits inhorticultural crops. The use of learning aids during the examination is not allowed. Examinationquestions should be answered by writing self-formulated text.

Repeat Examination:Next semester

(Recommended) Prerequisites:Basic knowledge in genetics, plant physiology and plant production.

Content:Flower formation, seed and fruit development. Physiology of vegetable crops as growth anddevelopment processes determining quality and yield of harvested products. Scientific basis offloricultural practice: Vegetative propagation; genetic/chemical/cultivation-dependent control ofbranching; genetic/chemical/cultivation-dependent control of shoot growth; leaf/flower variegation;flower development in floricultural crops; physiology of flower color; postharvest physiology of cutflowers.


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WZ1671: Crop Physiology: Growth and Development of Plants | Crop Physiology: Growth and Development of Plants

Intended Learning Outcomes:Upon successful completion of this module, students are able:- to understand the influence of environmental factors on major ontogenetic processes of vegetablecrops such as flowering and the formation of the harvested products;- to understand the underlying physiological principles of ornamental crop production methodsincluding vegetative propagation, optimization of plant architecture and flower quality andimproving longevity of ornamental crop products;- to analyze growth conditions of important crop species to optimize yield;- to evaluate molecular parameters affecting qualitative and quantitative yield traits in horticulturalcrops.

Teaching and Learning Methods:The learning contents are presented as PowerPoint-supported lectures to impart the relevanttheoretical background in plant physiology and to provide application-relevant examples inhorticulture. In addition, class discussions of case studies from literature are conducted to deepenthe knowledge in relevant topics.

Media:Black board illustrations, presentation slides, lecture, scriptum (Moodle), selected articles inscientific journals.

Reading List:Scriptum.Taiz, L. and Zeiger, E. 2006: Plant Physiology.Wien, H.C. 1997: The Physiology of Vegetable Crops.Actual articles from scientific journals will be provided.

Responsible for Module:Ruth Dr. Habegger ([email protected])

Courses (Type of course, Weekly hours per semester), Instructor: Crop Physiology: Growth and Development of Plants (Vorlesung, 4 SWS)Habegger R [L], Bienert G, Sieberer TFor further information in this module, please click campus.tum.de or here.


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WZ1672: Crop Quality: Basics of Quality Control and Assurance | Crop Quality: Basics of Quality Control and Assurance

Module Description

WZ1672: Crop Quality: Basics of Quality Control and Assurance | CropQuality: Basics of Quality Control and Assurance


Version of module description: summerterm 2018

Module Level:Master

Language:English



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:Students demonstrate their ability to understand quality control and assurance by applying non-destructive methods and to evaluate quality affecting factors in respect to horticultural crops byanswering comprehension questions and solving sample problems in a written examination (120min). Furthermore, students will be tested for their ability to analyze the import of secondarymetabolites to the aroma of vegetable crops. The use of learning aids during the examination is notallowed. The answers to the examination questions requires writing a self-formulated text.


(Recommended) Prerequisites:Basic knowledge in plant production and biochemical composition of vegetable and fruit crops.

Content:Definitions and regulations for food crop quality, including quality assurance systems nationallyand internationally. Non-destructive methods for measuring quality characteristics. Secondaryplant metabolism and quality characteristics of vegetables. Sampling methods and determinationsfor external quality (color, texture, firmness, etc.) and internal quality (secondary metabolites,aroma compounds, carbohydrates, organic acids). Endogenous and exogenous factors on qualityparameters of horticultural crops.

Intended Learning Outcomes:Upon successful completion of this module, students are able:- to understand quality control and maintenance measures and technologies;


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WZ1672: Crop Quality: Basics of Quality Control and Assurance | Crop Quality: Basics of Quality Control and Assurance

- to apply non-destructive methods for testing quality characteristics of horticultural products;- to apply the quality assurance systems for vegetables and fruits;- to analyze the contribution of secondary metabolites to the aroma of vegetable crops;- to evaluate the impact of endogenous and exogenous factors on external and internal qualityparameters of horticultural crops.

Teaching and Learning Methods:The learning contents are presented as PowerPoint-supported lectures to impart the theoreticalbackground in horticultural crop quality. In addition, class discussions of case studies fromliterature are used to intensify the knowledge in special topics.

Media:Presentation slides, lecture, scriptum (Moodle), selected articles in scientific journals.

Reading List:Scriptum, actual articles from scientific journals will be provided.

Responsible for Module:Ruth Habegger ([email protected])

Courses (Type of course, Weekly hours per semester), Instructor: Crop Quality: Basics of Quality Control and Assurance (Vorlesung, 4 SWS)Habegger R [L], Regos IFor further information in this module, please click campus.tum.de or here.


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WZ2619: Research Project: in silico Evolutionary Genetics of Plants and Pathogens | Forschungspraktikum: in silicoEvolutionsgenetik von Pflanzen und Pathogenen

Elective Courses | Elective Courses

Module Description

WZ2619: Research Project: in silico Evolutionary Genetics of Plantsand Pathogens | Forschungspraktikum: in silico Evolutionsgenetik vonPflanzen und Pathogenen



Module Level:Master

Language:English


Frequency:winter/summersemester

Credits:*10

Total Hours:300

Self-study Hours:60

Contact Hours:240


Description of Examination Method:Writing a paper-like research report


(Recommended) Prerequisites:Basic knowledge of computer system

Content:Modern research in evolutionary biology demands the integration of sequence data with theoreticaltools of simulations. This requires solid computational skills, including knowledge of variousbiological data resources, and usage of simulation softwares. During the course, students will 1)practice with some common data analysis methods of high throughput technology, such as nextgeneration sequencing and whole genome sequencing, 2) learn how to make use of existingbiological databases and 3) perform coalescent simulations to tests evolutionary scenarios.

Intended Learning Outcomes:Common computational strategies to process and analyze high throughtput data, including Perl,statistical analyses with R, sequence analysis with blast, BWA, Stampy, Dnasp, and coalescentsimulations with ms, msms and C++ and java codes.


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WZ2619: Research Project: in silico Evolutionary Genetics of Plants and Pathogens | Forschungspraktikum: in silicoEvolutionsgenetik von Pflanzen und Pathogenen

Teaching and Learning Methods:Practice sessions for computers

Media:Case studies

Reading List:Hartl and Clark, Principles of Population Genetics 4th Edition (2007); Hedrick, Genetics OfPopulations 4th Edition (2009); Wakeley, Coalescent Theory: An Introduction (2008)

Responsible for Module:Aurelien Prof. Tellier ([email protected])

Courses (Type of course, Weekly hours per semester), Instructor: Forschungspraktikum: in silico Evolutionsgenetik von Pflanzen und Pathogenen(Forschungspraktikum, 10 SWS)Tellier A [L], Silva Arias G, Tellier AFor further information in this module, please click campus.tum.de or here.


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WZ6428: Analytical Methods in Horticulture, Agriculture and Plant Biotechnology | Analytical Methods in Horticulture,Agriculture and Plant Biotechnology

Module Description

WZ6428: Analytical Methods in Horticulture, Agriculture and PlantBiotechnology | Analytical Methods in Horticulture, Agriculture andPlant Biotechnology



Module Level:Master

Language:English



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:Grading is based on laboratory assignments, which include the assessment of the practical work(40% of the grade), the written documentation of the data and results (40% of the grade) andan oral presentation of the key findings (20% of the grade). For grading of the practical workparticularly the accuracy and correctness of the results is assessed. The written documentationof the data includes the description of the theoretical background, presentation of raw data,calculations, application of statistical tests and evaluation, interpretation and discussion of theresults. In an oral presentation the students demonstrate their ability to visualise and communicatetheir data, results and conclusions to an audience and to discuss their scholarly work in front oftheir peers.

Repeat Examination:End of Semester

(Recommended) Prerequisites:None.

Content:This course focuses on basic methods in molecular plant biology, plant nutrition, biochemistry andanalytical chemistry. The students have the opportunity to apply methods including: - DNA isolation and quantification- Analysis of DNA by restriction digest and sequencing- Amplification of DNA by PCR- Cloning of PCR products or restriction fragments in cloning or expression vectors


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WZ6428: Analytical Methods in Horticulture, Agriculture and Plant Biotechnology | Analytical Methods in Horticulture,Agriculture and Plant Biotechnology

- Protein quantification by spectrophotometry- Analysis of plant metabolites and plant growth regulators by HPLC, GC and spectroscopy- Analysis of plant nutrients by atomic emission spectroscopy, ion chromatography and photometry

Intended Learning Outcomes:After successful participation of the practical course the students are able to:- isolate and quantify DNA and proteins- apply molecular biological methods including PCR, restriction digest and DNA sequencing- apply electrophoretic methods for analysis of DNA and proteins (agarose gel electrophoresis,SDS-PAGE) - use chromatographic and spectroscopic techniques for quantification of plant metabolites andnutrients- apply different types of calibration for quantitative analyses: external standard, internal standardand standard addition- evaluate data by basic statistical methods and interpret results- plan experiments and laboratory work- present the experimental results in a scientific way

Teaching and Learning Methods:The theoretical background is presented in two lectures ahead of the practical part. Equippedwith a detailed step-by-step script and the close supervision of the teachers the students executethe experiments independently. This offers the students to plan their schedule independently andenables them to learn/improve their time management in the laboratory. The students are guidedin evaluating and summarizing the obtained results in individual discussions with the supervisors.Finally, the students give short presentations of their results and the data are discussed in theclass.

Media:Black board illustrations, presentation slides (PowerPoint), scriptum (Moodle), application ofspecific software (e.g. evaluation of chromatograms and sequences), calculation and statisticalevaluation of data (mainly with Excel), discussion of results.

Reading List:The scriptum (provided via Moodle) provides the theoretical background and detailed protocols forthe experiments. Additional information (e.g. original articles) is provided via Moodle if required.

Responsible for Module:Rozhon, Wilfried; Dr. rer. nat.

Courses (Type of course, Weekly hours per semester), Instructor: Analytical Methods in Horticulture, Agriculture and Plant Biotechnology (Übung, 4 SWS)Poppenberger-Sieberer B [L], Rozhon WFor further information in this module, please click campus.tum.de or here.


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WZ2620: Applications of Evolutionary Theory in Agriculture: Population Genomics of Crop Pathogens and DiseaseManagement | Applications of Evolutionary Theory in Agriculture: Population Genomics of Crop Pathogens and DiseaseManagement

Module Description

WZ2620: Applications of Evolutionary Theory in Agriculture: PopulationGenomics of Crop Pathogens and Disease Management | Applicationsof Evolutionary Theory in Agriculture: Population Genomics of CropPathogens and Disease Management



Module Level:Master

Language:English


Frequency:summer semester

Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:There is an oral exam (30 min.) for each student consisting of analyzing and discussing a casestudy (a scientific experiment related to one crop disease) based on questions by the lecturer. Nohelp is allowed during the questions. The students have to prepare two studies at home beforethe exam, and one will be chosen at the time of examination. The students will need to 1) analyzethe methods used in the study and the results, 2) explain the concepts of evolutionary genetics,which are related to the respective case study, 3) describe the theoretical models presentedin the course, which have been adapted in the respective case study, 4) evaluate criticallythe management strategy used in the study, and 5) propose new better disease managementstrategies based on their acquired knowledge of pathogen genomics and pathogen evolution.Short calculations are possible.


(Recommended) Prerequisites:Basic knowledge in statistics and genetics, additional basic knowledge of phytopathology

Content:This module covers a profound overview of the evolutionary mechanisms driving the changes incrop pathogen populations and their implications for disease management.


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It is built in four major blocks (four topics). They are enclosed by seminar and discussion blockwhere students mobilize their theoretical knowledge to interpret data and propose new diseasemanagement strategies for major crops (rice, wheat, barley, banana, maize, apple, tomato). 1) Introduction to evolutionary genomics: we describe the neutral theory of molecular evolution(including genetic drift, random mutation, transposable elements insertion). How is a genomeorganized? What is the spatial structure of pathogen populations (between fields, regions, andcontinents). We describe how natural selection acts at the level of major genes and of quantitativetraits, and give examples of such genes in crop pathogens. This part is mainly a lecture with smallexercise to compute genetic drift using R.2) Pathogen genomics: range of genome sizes found in pathogens. What is the effect ofrecombination (sexual reproduction) and accumulation of deleterious mutations by Muller's ratchet.This part is mainly lecture with small exercise on a model of sexual recombination in pathogens. 3) Disease epidemiology: disease epidemiology principles, SIR models, models of disease spreadin a field (SEIR), herd immunity concept, evolution of aggressiveness. This block consists of alecture and long exercise sessions in R where simulations of SIR and SEIR models are performed.4) Host-parasite coevolution: introduction to models of coevolution, importance of gene-for-geneinteractions in plants. We study simple dynamical systems and predict the outcome of coevolution,that is occurrence of arms race or trench warfare dynamics. This part includes a short lectureand exercise sessions with R codes simulating coevolutionary dynamics. Simulations are used toexemplify and understand the possible outcome of coevolution and to understand the implicationsof deploying major resistance genes in disease management. Synthesis: what is an optimal disease management taking pathogen evolution into account? Thispart consists of a lecture and a seminar part (paper presentation) where the students have topropose new disease management strategies for some crop pathogens based on case studies andthe theory they learned during the course.

Intended Learning Outcomes:The students have a profound understanding of the evolutionary mechanisms driving evolutionaryand genomic changes in crop pathogen populations. For example, they can describe how thegenomes of pathogens change in time due to coevolution with their host, the action of humansand certain disease management strategies. Furthermore, the students are able to describe thegenome evolution of pathogens and use knowledge from published full genome data analyses ofcrop pathogens. The students understand the principles of disease epidemiology. They can build basicmathematical models and implement them in R to perform simulations and analyze their behavior. The students are able to describe and explain the mechanism of coevolution between hosts andtheir pathogens. To do so they are able to build a mathematical model of coevolution, analyze itslong-term dynamics and implement it in R. Finally, the students can integrate aspects of pathogenevolution into disease management, and are able to design their own new management strategiesfor different crop diseases. They have basic skills in coding with the software R and are thereforeable to perform basic statistics for plant pathology.


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Teaching and Learning Methods:The lectures and exercises are intermixed during the sessions. Typically, a first part of lectureintroduces the concepts and the mathematical models. Then students will implement the model inR and perform simulations under different parameters. Thereby, they gain a direct understanding ofthe behavior and outcome of the mathematical model. The exercises are done by the whole group,and students are encouraged to discuss their results with their colleagues, before a summary ispresented by the lecturer. There is also a seminar session, where students by groups of two willpresent a research paper which is a case study of population genomic data of a crop pathogen.The students perform a PowerPoint presentation of this case study and afterwards will discuss itwith the lecturer and the other students. The aim of the presentation is to describe, analyze andinterpret population genomic data of crop pathogens, critically evaluate the results and proposenew disease management strategies.

Media:PowerPoint, computer program R, whiteboard, published articles

Reading List:Madden, Hughes, and van den Bosch, The Study of Plant Disease Epidemics (2007); Hartl and Clark, Principles of Population Genetics 4th Edition (2007); Hedrick, Genetics Of Populations 4th Edition (2009); Otto and Day, A Biologist's Guide to Mathematical Modeling in Ecology and Evolution (2007); Milgroom, Population Biology of Plant Pathogens: Genetics, Ecology and Evolution. AmericanPhytopathological Society Press (2015)

Responsible for Module:Tellier, Aurélien; Prof. Dr.

Courses (Type of course, Weekly hours per semester), Instructor:

For further information in this module, please click campus.tum.de or here.


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CS0154: Computational Biology and Functional Genomics | Computational Biology and Functional Genomics

Module Description

CS0154: Computational Biology and Functional Genomics |Computational Biology and Functional Genomics



Module Level:Master

Language:German/English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:Learning outcomes shall be verified in a written test (90 minutes). Tasks shall be specified bymeans of which the students are to demonstrate that they know the bioinformatic methodsimparted as part of the module and that they have understood and are able to apply them forspecific case studies.


(Recommended) Prerequisites:Module Biochemistry, WZ1631 Bioinformatics, CS0001 Foundations of Computer Science

Content:Current methods in bioinformatics for analysing complex dynamical and biological systems. Thefollowing topics are treated exemplarily: • Next-Generation Sequencing Data Analyseso Quality Control, Data Preprocessingo Genom-Assembly and Genom-Mappingo SNP and SV Calling• Genexpression & RNA-Seqo Microarray Analyseso RNA-Seq Analyses• Bisulfite Sequencing & Epigenetics• Microbiom-Analyses• Single Cell Sequencing


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CS0154: Computational Biology and Functional Genomics | Computational Biology and Functional Genomics

Intended Learning Outcomes:The students acquire detailed and differentiated knowledge about bioinformatic methods andalgorithms to handle complex bioinformatic problems. The students are able to deduce anappropriate bioinformatic research design to investigate selected research questions. They candocumentate and analyse applied scientific methods and obtained results in a written form.

Teaching and Learning Methods:Lectures to provide the students with the theoretical and practical concepts of state-of-the-artbioinformatics methods, which they will need to independently apply these methods on real-world data. Tutorial with independent processing of selected research questions, the theoreticallymediated contents are outlined by means of concrete bioinformatic research questions. Thepresented bioinformatic methods and algorithms are applied on concrete problems self-containedat the computer. Furthermore it is imparted to the students how they can scientifically documentthe applied bioinformatic methods and the results obtained.

Media:PowerPoint presentations and blackboard. During the exercise the students work independently onPCs to apply the learnt methods on various case-studies.

Reading List:Bioinformatics and Functional Genomics, Jonathan Pevsner, 2017

Responsible for Module:Prof. Dominik Grimm




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WZ3098: Basics of Metabolomics | Basics of Metabolomics

Module Description




Module Level:Master

Language:English



Credits:*5

Total Hours:150


Contact Hours:45


Description of Examination Method:The examination consists of an oral presentation of 3-5 minutes (elevator pitch) (60% of final mark)and submissionof an maximum 6 page long abstract (40% of final mark) on the group work focusing on a specificproblem.


(Recommended) Prerequisites:- basic knowledge of biochemistry- basic statistical knowledge, e.g. t-test, etc.- basic laboratory skills

Content:Biochemical, analytical and data analytical basics of metabolomics are illustrated using relevantexamples.The following individual topics are covered:

biochemical basics- Definition of systems biology and its disciplines (omics)- Definition and aims of metabolomics and its role in systems biology- relation of metabolomics to other omics-technologies

analytical basics- basics of mass spectrometry (MS) and coupling of chromatographic methods


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- application of MS in metabolomics- basics of nuclear magnetic resonance (NMR) and its application in metabolomics

Metabolomics experiments- experimental design- sample preparation- implementation of measurements- quality control- metabolite identification

data analytical basics- basic statistical evaluation, e.g. HCA, PCA, PLS- bioinformatic approaches

relevant applications- in medicine, nutrition, food chemistry- to model organisms- in plant research and biotechnology

Intended Learning Outcomes:The students are able to define the term of systems biology and to state its different disciplines.Furthermore, they know different omics technologies and can separate them from each other.The students are able to compare analytical methods used in metabolomics based on theiradvantages anddisadvantages and select a fitting method to solve a specific question. Moreover, they are able toapply basicstatistical data analysis methods on a given dataset and interpret the results in biochemicalcontext. Additionally,students are competent to perform problem-based literature research in relevant media.On the basis of selected problems, students are able to question the current status of metabolomicresearch andstate possibilities for improvement.They can draft plans and execution of metabolomics experiments and are able to comment onthem.

Teaching and Learning Methods:The module consists of a lecture, including expert input, single- and group work, case studies andstudentpresentations.

Media:Script; slides


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Reading List:Metabolomics in Practice - Successful Strategies to Generate and Analyze Metabolic Data, 2013,1. Auflage,Wiley-VCH, ISBN: 9783527330898- The Handbook of Metabonomics and Metabolomics, 2007, 1. Auflage, Elsevier, ISBN:978-0-444-52841-4- verschieden Original- und Übersichtsarbeiten

Responsible for Module:Witting, Michael; Dr. Dr. rer. nat.

Courses (Type of course, Weekly hours per semester), Instructor: LectureBasics of Metabolism3 SWSMichael [email protected] further information in this module, please click campus.tum.de or here.


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WZ6429: Biotechnology in Horticulture | Biotechnology in Horticulture

Module Description




Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:Grading is based on laboratory assignments. By performing the individual experimentsautonomously, the students proof their ability to conduct plant transformation protocols and thecharacterisation of genetically modified plants under the stipulated safety regulations.In a written documentation of the data and results (approx. 10 pages) the students show their skillsin describing and graphically presenting the results of the individual experiments and demonstratetheir ability to interpret data with appropriate statistical tools and to discuss them critically in thecontext of the literature.The grade will be based on the student’s motivation and participation in class (50% weight) andthe quality of the written report (50% weight), which has to be handed in 6 weeks after the blockcourse has been concluded.


(Recommended) Prerequisites:Ideally, the students should have basic knowledge and experience in laboratory work. Theoreticalknowledge in plant physiology (Module Crop Physiology) molecular biology and biotechnology(Module Crop Biotechnology) is recommended.

Content:This course focusses on plant biotechnology and molecular biology. Subsequently, the studentshave the opportunity to apply plant biotechnological methods including: - DNA isolation; - Restriction analysis; - PCR genotyping;


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- Transient transformation of plants using Agrobacterium tumefaciens; - Stable transformation of plants using Agrobacterium tumefaciens;- Selection of transformants;- Segregation analysis;- Analysis of gene expression using reporter genes;- Modification of compounds by biotechnological approaches;- Purification and analysis of the obtained products using chromatographic methods.

Intended Learning Outcomes:After successful participation of the practical course the students are able:- to apply modern tools of molecular biology for the analysis and manipulation of plants; - to generate transiently and stably transformed transgenic plants; - to analyse transgenic plants by PCR-based genotyping; - to use marker genes for expression analysis; - to prepare, isolate and analyse plant metabolites by biotechnological methods;- to evaluate data by basic statistical methods;- to interpret the results of performed experiments;- to present the experimental results in a scientific way.

Teaching and Learning Methods:The theoretical background in Plant Biotechnology required to perform the experiments ispresented in PowerPoint-supported lectures ahead of the practical part. Equipped with a detailedstep-by-step script and the close supervision of the teachers the students practice experimentsto generate and characterize transgenic plants and to synthesize and purify secondary plantmetabolites in bacteria. Moreover in lectures and class discussions the students are guided how tosummarize the obtained results in a written report.

Media:Black board illustrations, presentation slides (PowerPoint), Book chapters in pdf Format, Scriptum(Moodle), documented results (Moodle).

Reading List:The script for the course provides detailed protocols for the experiments.For the theoretical background the following books are recommended:Slater, Scott & Fowler: Plant Biotechnology 2nd edition (2008) Oxford University Press.Griffiths, Wessler, Carroll and Doebley: Introduction to genetic analysis 10th edition (2011) W.H.Freeman.

Responsible for Module:Sieberer, Tobias; Dr. nat. techn.




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WZ1673: Crop Biotechnology | Crop Biotechnology

Module Description




Module Level:Master

Language:English



Credits:*6

Total Hours:180


Contact Hours:48


Description of Examination Method:In a written exam (60 min) the students document a sound knowledge of the methods of genetics,molecular biology and biotechnology that are applied in plant sciences today. They demonstrateinsight in technologies, aims and applications thereof. In addition, students are required to write aprotocol about the practical course part which details the methods used and results obtained, anddiscusses the outcome. The over-all grade is calculate from the grade on the written exame andthe grade obtained for the protocol (in equal weight).

Repeat Examination:

(Recommended) Prerequisites:Basics in Genetics, Genomics, Plant development; Biochemistry and/or Botany

Content:This course is conceived to give students an introduction into plant molecular biology and plantbiotechnology and is composed of a lecture part (2 SWS) and a practical part (2 SWS). It providesa background in plant genetics and plant molecular biology, introduces principles of tissue cultureand other technologies essential to generate transgenic plants and teaches methods required forresearch in plant molecular biology and plant biochemistry. Moreover, an overview of horticulturalbiotech crops on the market is given.In addition to the lectures students get hands-on experience in using some of the methodspresented. In a case study transgenic crop material is screened for in samples collectedin Germany by using methods such as DNA extractions, restriction digests, PCRs, gelelectrophoresis and sequencing.


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Intended Learning Outcomes:Upon completion of this module students are able to understand and assess methods and aims ofPlant Biotechnology. They are capable of carrying our first lab-based experiments with methods ofmolecular biology and can interpret the results.

Teaching and Learning Methods:Lecture: presentation of the lecture contends on slides using PowerPoint. Practical Part: teachingof research techniques with relevance for plant moleular biology and plant biotechnology using acase study

Media:Slides of the lecture are available online

Reading List:Biochemistry and Molecular Biology of Plants. Buchanan, Gruissem and Jones, John Wiley &Sons, 2002; The Condensed Protocols: From Molecular Cloning: A Laboratory Manual. ColdSpring Harbor Laboratory Press, 2006; Plant Biotechnology: The Genetic Manipulation of Plants.Adrian Slater, Nigel W. Scott und Mark R. Fowler, Oxford University Press, 2008.

Responsible for Module:Brigitte Poppenberger ([email protected])

Courses (Type of course, Weekly hours per semester), Instructor: Crop biotechnology (Vorlesung, 4 SWS)Poppenberger-Sieberer B, Rozhon WFor further information in this module, please click campus.tum.de or here.


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WZ1720: Crop Breeding | Crop Breeding

Module Description




Module Level:Master

Language:English



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:The final examination is a written test (120 min, Klausur) without additional material. Studentsdemonstrate in the exam that they are capable to design field and laboratory experiments, toanalyze different genetic parameters and to interpret the results. They can explain importantquantitative genetic parameters and their relevance for selection and for the optimization ofhorticultural crop breeding programs. They can show how the phenotypic and molecular diversityof plant breeding populations and genetic resources is characterized. Students are able toexplain the molecular tools for genomic and genetic analyses and to evaluate which methods areappropriate for specific scenarios. The grade of the exam will be the final grade of the module.


(Recommended) Prerequisites:Successful Bachelor courses in biology, genetics, plant breeding, and applied statistics.

Content:This module presents molecular tools for forward and reverse genetic analysis, such as linkageanalysis, tilling, transposon tagging and gene editing. Different experimental designs and theirunderlying randomization will be shown. The module presents the theoretical concepts behindan analysis of variance of phenotypic and molecular data (ANOVA, AMOVA). Specific propertiesof breeding schemes of horticultural crops will be connected to their biological properties. Theimportance of native biodiversity for plant breeding will be discussed. Methods for valorization ofplant genetic resources are presented.


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Intended Learning Outcomes:After successful completion of the module, students can design field and laboratory experimentsrelevant for crop breeding. They will be able to perform a profound statistical analysis on theseexperiments, interpret their results, understand the relevance of different variance componentestimators for breeding and calculate derived genetic parameters such as trait heritability. Theywill become familiar with trait correlations and how these correlations can be relevant for selection.Students will be able to characterize and evaluate plant breeding populations and plant geneticresources with respect to their phenotypic and molecular diversity. They acquire an understandingof molecular tools employed in genomic and genetic analysis. Students will be able to integratethe different methods and tools they have learnt to design and optimize breeding programs ofhorticultural crops.

Teaching and Learning Methods:The module consists of a lecture with PowerPoint presentations accompanied with practicaldemonstrations at the computer and in the lab. Students will perform a greenhouse experimentin which they will collect phenotypic data, connect it to molecular data and will perform analysestaught during the course. Students are encouraged to present literature studies.

Media:PowerPoint presentations, panel work, exercises, presentation of current literature.

Reading List:Rex Bernardo (2014): Essentials of Plant Breeding, Stemma Press, ISBN: 978-0-9720724-2-7Michael Lynch and Bruce Walsh (1998): Genetics and Analysis of Quantitative Traits; SinauerVerlag, ISBN 978-0878934812

Responsible for Module:Schön, Chris-Carolin; Prof. Dr.sc.agr. habil.

Courses (Type of course, Weekly hours per semester), Instructor: Crop Breeding (Vorlesung, 4 SWS)Schön C, Avramova VFor further information in this module, please click campus.tum.de or here.


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WZ1696: Crop Genomics | Crop Genomics

Module Description




Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:In the written exam (90 min, Klausur) students explain without additional helping material theprinciples of genetic and bioinformatics strategies of genome analysis in crop plants. Theydemonstrate that they understand the different layers of genome analysis in crop plants, and thatthey are able to apply the required genomic and bioinformatics approaches in case studies andjudge which methods can be applied in specific cases. They can explain the use of genomic datato analyze genotype-phenotype associations. The grade of the exam will be the final grade of themodule.


(Recommended) Prerequisites:Successful completion of Bachelor’s courses in genetics, molecular biology, plant breeding andstatistics is required. Basic knowledge in bioinformatics and skills in R programming or a computerlanguage like Python is highly recommended.

Content:- Genome organization in crop plants (theory)- Next generation sequencing and genotyping technologies (theory)- Genome sequencing and annotation (theory)- Accessing biological sequence information from databases (theory, exercises)- DNA sequence comparison and alignment, homology searches (theory, exercises)- Analysis of genomic sequence data, detection of sequence variants (theory, exercises)- Analysis of gene expression through genome-wide approaches (theory, exercises)- Comparative genome analysis (theory)


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- Genotype-phenotype association for complex agronomic traits (theory, exercises)- Application of genomic methods in applied plant breeding programs (theory)

Intended Learning Outcomes:Upon completion of the module students are able to evaluate molecular methods and thebioinformatic and genetic concepts of genome analysis in crops. They understand the genomeorganization of crop plants and can explain the concepts of next generation genome sequencing,genome annotation and functional analysis of crop plants. They will be able to access biologicalsequence information from databases and understand the concept of DNA sequence comparisonand alignment. Students will be able to analyze plant genomics data and to use bioinformatic/statistical approaches for the analysis of genotype-phenotype associations. Successful studentscan judge which approaches are appropriate for specific situations.

Teaching and Learning Methods:Theoretical concepts are demonstrated in PowerPoint presentations. Practical application ofthese concepts will be through computer exercises and tutorials using experimental data sets.In individual or group work on specific topics with presentations students show their ability tounderstand and solve problems using current literature and to analyze and evaluate the requiredmethods.Students are encouraged to attend the weekly talks of the SFB924 seminar series (dates andtopics announced under http://sfb924.wzw.tum.de), which are given by national and internationalexperts in plant molecular biology and plant genomics.

Media:PowerPoint presentations, whiteboard. Lecture slides will be provided online in pdf format.Computer exercises, application training (analysis of sequence data, genotype-phenotypeassociations)Current literature

Reading List:Brown: Genomes 4. Garland Science, 2017. ISBN 978-0-815-345084Grotewold, Chappell and Kellogg: Plant Genes, Genomes and Genetics. Wiley-Blackwell, 2015.ISBN: 978-1-119-99887-7

Current literature from specific journals will be announced during the lecture.

Responsible for Module:




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WZ1588: Evolutionary Genetics of Plants and Microorganisms | Evolutionary Genetics of Plants and Microorganisms

Module Description

WZ1588: Evolutionary Genetics of Plants and Microorganisms |Evolutionary Genetics of Plants and Microorganisms



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:The examination consists of an oral exam (30 min). The students are given a dataset to analyzefor 30 mins of preparation time. The aim of this study is to demonstrate that the students cananalyze and interpret genetic diversity data obtained as sequence of few genes or full genomes.The exam questions cover in particular the interpretation of the computed statistics. This includes,for example, analyzing published data using the program DnaSP (on their own computer providedor provided one), explaining the underlying principles of evolutionary genetics and populationgenetics, as well as the evaluation and interpretation of the results. The students should forexample, explain how the effects of evolution influence sequence data polymorphism, and how themathematical models of this course predict these outcomes


(Recommended) Prerequisites:Basic knowledge in genetics and statistics.

Content:1) Molecular evolution: Hardy-Weinberg equilibrium, neutral … evolution, mutation-drift equilibrium,natural selection, models of speciation, molecular clock, sexual reproduction and recombination. …2) Population genetics and their application in the genome analysis of plants and microorganisms:coalescence models, application of the coalescent in genome analysis for detection of selection,analysis of population structure, inference of past demographic history. …3) Population genetics and plant breeding: history of plant breeding, examples of domesticationprocesses, effects of domestication on the genome.


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WZ1588: Evolutionary Genetics of Plants and Microorganisms | Evolutionary Genetics of Plants and Microorganisms

Intended Learning Outcomes:At the end of the module the students can 1) apply general methods for acquiring publisheddata from internet databases. They 2) can independently analyze DNA sequences with thesoftware DnaSP. 3) The students understand the principles of evolutionary genetics and populationgenetics, for example the effects and change in frequencies of mutations in populations, the role ofnatural selection and link to phenotyping, and the role and importance of stochastic processes inevolution. They can analyze the effects of these mechanisms in genetic data, and independentlyapply such analyses on full genomes. 4) The students can apply, evaluate and critically discussthe basics of population genetics theory, especially for its application to plant breeding. In principle,the students can use this knowledge also in the field of animal breeding, evolutionary ecologyor human evolution. They are able to critically analyze published results in these areas, possiblyfurther develop novel data analyses using full genomes and apply the concepts and techniques toany species.

Teaching and Learning Methods:Teaching method: The course includes 2 SWS lectures and 2 SWS exercises. The lectures providethe theoretical and mathematical background to the theory of evolution. During exercises, thesoftware DnaSP is used for sequence data analysis. In the exercises, the students apply theclassical statistics computed from population polymorphism and also discuss their interpretation inconnection to the theory.Learning Activity: Study of scientific articles on plant breeding or human evolution and criticalanalysis of the published results. The exercises develop the process of problem solving and findinginterpretation of the data.

Media:Presentations with PowerPoint, software used: DnaSP, R statistics and coalescent simulators.

Reading List:Hartl and Clark, Principles of Population Genetics 4th Edition (2007); Hedrick, Genetics Of Populations 4th Edition (2009); Wakeley, Coalescent Theory: An Introduction(2008)


Courses (Type of course, Weekly hours per semester), Instructor: Evolutionsgenetik der Pflanzen und Mikroorganismen (Vorlesung, 2 SWS)Tellier A [L], Tellier A

Evolutionsgenetik der Pflanzen und Mikroorganismen (Übung, 2 SWS)Tellier A [L], Tellier AFor further information in this module, please click campus.tum.de or here.


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WZ6430: Genetic and Environmental Control of Vegetal Plants | Genetic and Environmental Control of Vegetal Plants

Module Description

WZ6430: Genetic and Environmental Control of Vegetal Plants | Geneticand Environmental Control of Vegetal Plants



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:In the oral examination (30 min.) students demonstrate their ability to analyze the biochemicalprocesses of primary and secondary plant metabolites and to analyze genetic potential,environmental and plant production factors and the role of mineral nutrition on the quality of vegetalplants. The students need to answer comprehension questions and solve sample problems.Furthermore, the ability is tested to conduct the Human Sensory evaluation on the analysis ofaroma compounds of crops. Use of learning aids during the examination is not allowed.

Repeat Examination:Next semester / End of Semester

(Recommended) Prerequisites:Basic knowledge in plant production and crop quality.

Content:Dependence of aroma compounds in vegetal crops on genetic potential and environmentalconditions during cultivation of plants. Knowledge of special extraction and analysis methodsfor aroma compounds. Basics of Human Sensory analysis and application for vegetal crops.Correlation between analytical and sensory methods. The functions of mineral nutrients (N, K, P, S,Ca, Mg, trace elements) in plant metabolism and their impact on plant composition with respect tointernal nutritional and processing properties. Effect of the supply of mineral nutrients on externaland internal parameters of plant quality; the influence of the physiological function of nutrients onquality defining products of primary and secondary plant metabolism.


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WZ6430: Genetic and Environmental Control of Vegetal Plants | Genetic and Environmental Control of Vegetal Plants

Intended Learning Outcomes:Upon successful completion of this module, students are able:- to apply Human Sensory evaluation on the analysis of aroma compounds of vegetal crops;- to analyze the effects of genetic potential and environmental and plant production factors onaroma relevant plant compounds;- to analyze how physiological functions of nutrients can affect quality defining products of primaryand secondary plant metabolism;- to evaluate the role of the supply of mineral nutrients (fertilization) on external and internal qualityparameters in relation to other exogenous factors;- to chose appropriate instruments, measuring methods and analytical tools;- to evaluate the differences of methods for analyzing internal quality parameters by usinganalytical tools and instruments and interpreting measured data.

Teaching and Learning Methods:The knowledge will be imparted by PowerPoint-supported lectures to transfer the specializedknowledge about effect of genetic potential and environmental conditions on plant metabolitesand the functions of mineral nutrients in plant metabolism. In addition, class discussion of casestudies from literature are conducted to intensify the knowledge in relevant topics. In the labexercise course students will define and solve problems in the chemical analysis of internal qualityparameters. They will get practice in laboratory skills by performing experiments.

Media:Presentation; lecture, scriptum (Moodle), demonstration and lab practical in labs.

Reading List:Taiz, L. and Zeiger, E. 2006: Plant Physiology.Belitz, H.D.; Grosch, W.; Schieberle, P. 2009: Food Chemistry.Stone, H. and Sidel, J.L. 1993: Sensory Evaluation Practices.Marschner, H. 1995: Mineral Nutrition of Higher Plants. 2nd edition.Marschner, P. (ed.) 2012: Marschner’s Mineral Nutrition of Higher Plants. 3rd edition.

Responsible for Module:Habegger, Ruth; Dr. rer. hort.




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WZ1035: Host-Parasite-Interaction | Host-Parasite-Interaction

Module Description




Module Level:Master

Language: Duration: Frequency:

Credits:*5

Total Hours:150

Self-study Hours:75

Contact Hours:75


Description of Examination Method:The module is rated via written examination, Klausur, (essay exam, no multiple choice, withoutthe use of learning aids, (100 % of the grade; 90 min). The exam tests the ability of the studentsto transfer the deep knowledge of principles of molecular plant pathogen interaction on newscientific questions. Students have to show their ability to design experiments suitable to test agiven hypothesis from molecular host-parasite interactions. Students have to show in how far theyare able to extract scientific progress from original data or experiments presented in the exam.


(Recommended) Prerequisites:Basic knowledge of Plant Sciences and Phytopathology at the B.Sc. Level

Content:In this modul, students reach a deep understanding of plant-pathogen interaction at the molecularlevel. This comprises pattern-triggered immunity, effector-triggered susceptibility, effector-triggeredimmunity and translational research. This is not restricted to model plants but extends to cropsand fills the gap between basic research and applied plant sciences in breeding and biotechnologyfor disease resistance. In interactive learning structures with small groups, we train reading andunderstanding of original literature (Journal Club). In the practical course, we learn real time PCR,plant immune response assays, transient transformation of plants, cell biology of plant defensereactions, etc.


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Intended Learning Outcomes:Education to become a molecular plant pathologist, who is able to judge and design approachesfor increasing disease resistance in model and crop plants. Upon successful completion of the module, students are able- to understand the molecular basis of plant pathogen interactions in depth. - to transfer theoretical background and definitions of molecular host parasite interactions. - to analyze plant immune responses. - to collect new theoretical knowledge from literature and understand innovative technologies inplant immunity and susceptibility. - to carry out key molecular methods for quantification of plant immune reactions and diseasesusceptibility (e.g. real time PCR, reactive oxygen measurement, transient transformation of plants,cell biology of plant defense reactions) in hands-on experience- to generate experimental design and carry out evaluation of plant disease resistance tests inmodel and crop plants. Additionally, students are able to process and present complex information from original literature.

Teaching and Learning Methods:In the lecture students gain knowledge about theoretical background of plant parasite interactions,which is extracted and focussed by the lecturers from review literature. In the exercise, studentspractise in small groups key methods for quantification of plant immune reactions and diseasesusceptibility. They make hands-on experience, practise the use of molecular methods anddevices, document their data under guidance and discuss them with group members andsupervisors. In the journal club, students are guided in small groups how to critically read originalresearch papers, digest information and present most central findings from a recent original paper.

Media:PowerPoint

Reading List:Buchanan 2015: Biochemistry & Molecular Biology of Plants. Review literature provided

Responsible for Module:Hückelhoven, Ralph; Prof. Dr. rer. nat.

Courses (Type of course, Weekly hours per semester), Instructor: Host-Parasite-Interaction (Übung, 2 SWS)Ranf-Zipproth S [L], Engelhardt S, Hückelhoven R, Stam R, Stegmann M

Host-Parasite-Interaction (Vorlesung, 1 SWS)Ranf-Zipproth S [L], Hückelhoven R

Host-Parasite-Interaction (Seminar, 2 SWS)Ranf-Zipproth S [L], Hückelhoven R, Engelhardt S, Stam R, Stegmann MFor further information in this module, please click campus.tum.de or here.


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WZ1545: Human Resource Management in Agriculture and Related Industries | Human Resource Management inAgriculture and Related Industries

Module Description

WZ1545: Human Resource Management in Agriculture and RelatedIndustries | Human Resource Management in Agriculture and RelatedIndustries



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:During the written exam (90 min.) students demonstrate their ability to understand human resourcemanagement practices, to select and adapt techniques suitable to specific contexts in agricultureand life science industries, to compare and contrast techniques and practices, to evaluate andchange selected practices in case applications. Example practices cover the fields of planningthe workforce, recruiting, selecting, and training employees, as well as providing feedback to, andevaluating employees, as well as discipline and dismissal, compensation, incentive plans, benefitsand services, and workplace diversity. Students analyze exam questions and write up answers intheir own words.


(Recommended) Prerequisites:BS Degree. Prior knowledge of basic ideas of economics and management is required; knowledgein strategic management is recommended.

Content:The course is designed to provide master level students with an understanding of pertinenthuman resource management practices and how to adapt practices from other industries tofarms, horticultural and landscaping operations, in agribusinesses, in the food industry, and inrelated businesses. Practices relate to planning the workforce, recruiting, selecting, and trainingemployees, as well as providing feedback to, and evaluating employees. Additional practices relateto discipline and dismissal, compensation, incentive plans, benefits and services, and workplace


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WZ1545: Human Resource Management in Agriculture and Related Industries | Human Resource Management inAgriculture and Related Industries

diversity. Examples of current issues as well as laws and regulations provide context for differenthuman resource management practices.

Intended Learning Outcomes:After successfully completing the module, students are able to accomplish the following: - understand human resource management practices and their objectives; - evaluate human resource management practices in use; - develop and adapt appropriate human resource management practices for specific organizationsin agriculture and the life science industries. - determine the fit of different human resource management practices with different organizationalgoals and environments.

Teaching and Learning Methods:Lectures serve to introduce human resource management practices and their objectives.Video clips serve to illuminate HRM practices and as a basis of discussion of practices. Casedescriptions and task sheets are analyzed in small groups and discussed in class to empowerstudents to apply human resource management practices in specific constellations.

Media:Presentation software, case descriptions and task sheets, discussion facilitation support media,video clips

Reading List:Dessler, G. (latest edition). Human resource management, Prentice Hall: Upper Saddle River/NJ.

Responsible for Module:Vera Bitsch [email protected]

Courses (Type of course, Weekly hours per semester), Instructor: Human Resource Management in Agriculture and Related Industries (Seminar, 4 SWS)Bitsch V [L], Bitsch V, Wagner CFor further information in this module, please click campus.tum.de or here.


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WZ1589: Marker-assisted Selection | Marker-assisted Selection

Module Description




Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:In the oral examination (30 min) students show without additional material that they are able toexplain the basic concepts of marker-assisted selection. They demonstrate that they understandthe required statistical and genetic methods. They are able to apply the methods in case studiesand place them in the context of a breeding program. They can explain different methods in theanalysis of quantitative trait loci. They show that they understand the basic concepts of genomicprediction and selection. They are able to evaluate the efficiency of marker assisted prediction andselection in breeding programs.


(Recommended) Prerequisites:Successful Bachelor courses in biology, genetics, plant breeding, biotechnology and appliedstatistics.

Content:Technical and genetic principles of molecular markers; building genetic and physical maps;theoretical background and experimental data sets for QTL- and association mapping as well asfor genome wide prediction; theoretical background and experimental results for marker-assistedselection

Intended Learning Outcomes:After successful completion of the module students are able to understand the basic conceptsof marker-assisted selection, to apply statistical methods to experimental data sets and to usethe respective genetic information in breeding programs. Students will be familiar with different


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regression methods (e.g. single marker regression, multiple marker regression) in the analysisof quantitative trait loci through linkage or genome wide association mapping. Using regularizedregression, they will be able to perform genomic prediction and selection. Based on examplesfrom the literature they will be able to apply the above mentioned statistical methods to data.Using resampling methods, students will know how to evaluate the efficiency of marker-assistedprediction and selection and will be able to judge under which scenarios they are a useful tool formaking breeding decisions.

Teaching and Learning Methods:The module consists of a lecture, in which the theoretical foundations are developed togetherwith the students through lecture and chalkboard work in dialog. PowerPoint presentations areused to visualize the concepts presented. The theoretical knowledge will be extended in computerexercises through the analysis of experimental data sets.

Media:PowerPoint presentations, chalkboardComputer exercises, application training

Reading List:Lynch and Walsh (1998): Genetics and Analysis of Quantitative Traits; Sinauer Verlag, ISBN 978 0878934812

Risk – A Multidisciplinary Introduction (2014), Chapter 7 by Schön and Wimmer: Statistical Modelsfor the Prediction of Genetic Values, Springer Verlag, ISBN 978-3-319-04486-6

Responsible for Module:Prof. Chris-Carolin Schön [email protected]




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WZ2049: Methods for Analysis of Next Generation Sequencing data | Methods for Analysis of Next GenerationSequencing data

Module Description

WZ2049: Methods for Analysis of Next Generation Sequencing data |Methods for Analysis of Next Generation Sequencing data



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:The students have to hand in a written report, in which they describe their analysis of a datasetthey have chosen. Three to four weeks will be given for performing the analysis and write thereport with description of methods, statistical analyses and discussion of the results.


(Recommended) Prerequisites:Basic knowledge in statistics and genetics, basic knowledge in UNIX

Content:1) Introduction to NGS data and jargon.2) Analysis of genomic NGS data: type of files, download NGS data from databases, barcoding,trimming, read quality control, parsing metagenomic data, perform read-mapping with a referencegenome, perform SNP calling, gene annotation, statistical bias in SNP calling. Use of SAMtoolsand Galaxy.3) Analysis of gene expression data from RNAseq: type of files, perform read-mapping of atranscriptome, assembly of transcriptome, annotation of genes, gene expression analysis, bias ingene expression analysis.4) de novo genome Assembly: assemble de novo of a simple genome, annotation of assembly. .5) Exercise and practice of analysis based on a dataset from initial data to statistical analysis andwriting a report with discussion about the data.


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WZ2049: Methods for Analysis of Next Generation Sequencing data | Methods for Analysis of Next GenerationSequencing data

Intended Learning Outcomes:A profound understanding of the type of data generated by NGS, profound understanding of theanalysis of genomic data up to SNP calling, profound understanding of analysis of gene expressiondata from RNAseq. Understanding of bias in SNP calling and gene expression and understandingof statistical issues with NGS data. Profound understanding of the challenges of de novo (andreference-based) genome assemblies.Profound understanding of the meanings of coverage/read depth etc.Be confident in using the classic tools for bioinformatics of NGS data.

Teaching and Learning Methods:lecture, exercises, mutual questions and answers

Media:Software training: R, SAMtools, Trimmomatic, bwa, trinity, velvet, Galaxy, Python, BLAST, PAGIT

Reading List:


Courses (Type of course, Weekly hours per semester), Instructor: NGS Datenanalyse (Übung, 4 SWS)Tellier A [L], Ortiz Valencia E, Schäfer H, Silva Arias G, Tellier AFor further information in this module, please click campus.tum.de or here.


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WZ6431: Model Systems and Crop Quality | Model Systems and Crop Quality

Module Description

WZ6431: Model Systems and Crop Quality | Model Systems and CropQuality



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:The learning outcome is tested by an oral presentation (90%) at the end of the semester (durationof the presentation 30 min). During this presentation, students will give a talk (30 min) accordingto the scientific standard, treating one specific topic by showing and interpreting the resultscollected during the experiments (e.g., the effect of salinity stress on plant growth and chemicalcomposition). Based on the background, a specific research question is to be deduced, theappropriate experimental design and suitable methods are to be selected and justified, and resultsare to be presented and discussed. Complex aspects are to be reduced to their key message. In adiscussion (10 min) students will answer comprehension questions on the treated problems (e.g.effects of abiotic stress on plant growth) and show their general understanding. The presentationwill be supplemented by a written precis about its content (3000 words; 10%).

Repeat Examination:Next semester / End of Semester

(Recommended) Prerequisites:Basic knowledge in plant nutrition

Content:A scientific experiment on a current topic in plant nutrition will be planned, conducted andevaluated. Examples for possible topics are: Plant growth and chemical composition (minerals and quality parameters) as affected by abioticstress (drought, salinity, nutrient deficiency or toxicity), adaptation or mitigation strategies to climatechange or nutrient - environmental interactions.


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WZ6431: Model Systems and Crop Quality | Model Systems and Crop Quality

The content includes the theoretical background of the problems as well as theoretical andpractical aspects on the design of such experiments and adequate methods for data collection(e.g. nutrient analyses in plants and soils, ecophysiological (e.g. plant water status, osmoticadjustment) and non-destructive methods (e.g., canopy temperature, thermography, hyperspectralsensoring) to follow the plants biomass production and nutrient status.

Intended Learning Outcomes:At the end of the module students are able to1. basically plan and conduct experiments in the area of plant nutrition, 2. select appropriate analytical methods such as chemical analyses of soils and plants for mineralsand quality parameters, ecophysiological and non-destructive methods and assess their specificstrengths and weaknesses. 3. perform an adequate data documentation and evaluation4. apply their theoretical background knowledge (e.g. the causes and consequences of abioticstress to plants) to the specific research question5. structure achieved knowledge and results for oral and written presentations according toscientific standards.

Teaching and Learning Methods:The lecture presents an overview on the theoretical background of the specific topic, e.g. reactionsof plants on abiotic stress. In the exercise course, students use different methods in practicalanalytical work to assess the specific strengths and weaknesses of the methods. In addition, inthe exercise course students will be trained in the basics of scientific writing and presentation. Theexercise course also includes the individual search on current literature.

Media:Presentations, practical analyses, whiteboard work

Reading List:Marschner, H., 1995: Mineral Nutrition of Higher Plants, Academic Press London, 2nd Edition.Marschner, P. (ed), 2012: Marschner's Mineral of Higher Plants, Academic Press London, 3rdEdition.Journal articles

Responsible for Module:Sabine von Tucher [email protected]




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WZ8128: Methods of Genome Analysis | Methoden der Genomanalyse

Module Description




Module Level:Bachelor/Master




Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:The module test involves a graded written exam.The goal of the written exam (90 minutes) is to assess how well the students understand the basicconcepts of genome analysis (like genes, regulatory sequences, operons, alternative splicing,SNPs, microRNAs, pseudogenes, repeats, orthology/paralogy) and how well they are able toreproduce them in limited time. Based on exemplary method calls, interrogation of input and outputof methods, as well as the building of possible method pipelines to solve a specific bioinformaticsproblem, and the interpretation of method results, it is assessed how well the students are ableto do bioinformatics analyses on their own, choose appropriate methods suitable to a specificproblem and apply these. No electronic devices are allowed except for pocket calculators.Students are asked to write free-text answers to questions, solve algorithmic and logical problems,and to work through a limited number of multiple-choice questions by ticking the right answer.

To pass the module at least the score 4.0 is required.


(Recommended) Prerequisites:Suggested pre-requisites for participation is basic knowledge of bioinformatics, for example astaught in the TUM modules „Introduction in Bioinformatics I and II“.

Content:The following topics are core elements of the module:- Genome structure- Analysis of DNA sequences


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- Gene prediction- Operon structures- Alternative splicing- RNA structure- microRNAs- Repeats- Pseudogenes

Intended Learning Outcomes:Upon successful completion of the module the students are able to:• Understand and reflect in-depth important concepts of genome analysis (genes, regulatorysequences, operons, alternative splicing, SNPs, microRNAs, pseudogenes, repeats, orthology/paralogy), • Practically apply selected methods of genome analysis (e.g. gene prediction, prediction ofmicroRNA binding sites, identification of DNA sequence motifs, prediction of RNA structures).

Teaching and Learning Methods:The selected teaching approach Lecture course and the selected teaching method Oral talkare especially well suited for imparting basic concepts, methodological approaches as well astypical problems of genome informatics to students with basic knowledge of bioinformatics. Inparticular the exercise serves as a way to deepen the learning content of the lecture. The studentsare expected to prepare a scientific publication covering an already discussed topic from thelecture. In the exercise the algorithms and methods used in the publication are discussed. Wherepossible, the usage of the methods and the analysis of selected case studies from the publicationis presented in class. Thus, also the application of the methods is trained. It will be announcedbefore each exercise which scientific publication will be discussed. The students are encouraged toprepare the contents of the paper and familiarize their selves with the methods used. The lecturerdiscusses the procedures and methods in the exercise, and responds to questions and problems.Where possible, small selected case studies are solved together in the exercise, or are presentedby students.

Media:Scientific publications, presentation of slides, discussions during lectures, materials on the moduleWeb page.

Reading List:- Genomes 3, T.A. Brown, Garland Science, 2007- Bioinformatics and Functional Genomics, Jonathan Pevsner, John Wiley, 2003- Understanding Bioinformaics, M. Zvelebil and J.O.Baum, Garland Science 2008


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Responsible for Module:Dimitri Frischmann [email protected]




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WI001205: People in Organizations: Managing Change and Sustainability in Agribusiness and the Food Industry | Peoplein Organizations: Managing Change and Sustainability in Agribusiness and the Food Industry

Module Description

WI001205: People in Organizations: Managing Change andSustainability in Agribusiness and the Food Industry | People inOrganizations: Managing Change and Sustainability in Agribusinessand the Food Industry



Module Level:Master

Language:English



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:The assessment type for the module is a graded report (100%). The report includesmemorandums addressing 9-10 of the case studies discussed in class; and a concept paperaddressing an organizational concept. The concept paper is also presented by each student.Through the case memorandums, the students demonstrate the ability to discuss the assignedcase questions by selecting and applying suitable theoretical concepts to agribusiness and thefood industry. Building on the reflection process for each individual memorandum and the cases,which build on each other, deep-level contextual learning is achieved. In the concept paper,students demonstrate their ability to research and critically evaluate a current organizationalconcept. Through the presentation and discussion of the concept paper, students demonstratetheir ability to communicate theoretical concepts and their application to agribusiness and the foodindustry.


(Recommended) Prerequisites:This is an advanced module. Prior knowledge of economic and management concepts is required.Successful completion of a management course on MSc. level is required, e.g., Human ResourceManagement in Agriculture and Related Industries or Agribusiness Management. Experience indesk research and scientific writing is required. Knowledge of basic concepts of human resourcemanagement and management skills is required.


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Content:The module builds on key concepts of economics and management, specifically human resourcemanagement, to provide master level students with knowledge in organizational behavior, theory,and development and build competencies in organizational analysis and change.Topics covered include:- metaphors of and perspectives on organizations, their strengths and limitations- the role of the individual, the group, and the organization in a high performance environment- organizational structures and the organization-environment fit- corporate social responsibility, sustainability challenges, business ethics, and ethical conduct inbio-based industries- adapting to current challenges and changes in the institutional environment of agriculture and thefood industry- understanding organizational change, facilitating change processes, and overcoming barriers inthe context of agribusiness and the food industry.

Intended Learning Outcomes:After successfully completing the module students are able to analyze, evaluate, and changeorganizational management and development practices in the agribusiness and food industrycontext. Specifically, students are able to select and apply suitable theoretical concepts or models of organizational behavior, theory, anddevelopment to meet organizational challenges in agribusiness and the food industry- contrast the strengths and limitations of different perspectives on organizations- evaluate the potential impacts of various organizational management options on the individual,group, and organizational levels- identify ethical challenges and options to organizations in agribusiness and the food industry- adapt organizational practices and policies to sustainability measurement requirements anddevelop organizational sustainability or CSR (corporate social responsibility) policies- structure organizational change processes, apply models of organizational change, and evaluatea model’s potential implications- adapt organizational management and development practices to the specific context inagribusinsess and the food industry.

Teaching and Learning Methods:The course People in Organizations: Managing Change and Sustainability in Agribusinessand the Food Industry has a seminar format based on the case study method. The seminarformat is implemented based on case descriptions of problems, challenges, and innovationsin agribusiness and food industry supply chains. Through individual document research andindividually prepared class discussions and group work, students develop the ability to criticallyreflect on and apply concepts of organizational behavior, theory, and development in the contextof agribusiness and the food industry. Through presentations and concept discussions, studentsdevelop in-depth knowledge of exemplary theoretical concepts. During class discussions andgroup presentations, students reflect on their experiences, prior knowledge, and assignmentsto develop their conceptual and evaluative skills and to adapt theoretical knowledge to practicalchallenges


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Media:Reading assignments; case descriptions; presentation software; discussion facilitation supportmedia, such as flipcharts and discussion boards; video clips and podcasts.

Reading List:Selected chapters fromBrown, Donald R. (latest edition). An Experiential Approach to Organization Development, PrenticeHall: Boston.Daft, Richard L. (latest edition). Organizational Theory and Design. South-Western/CengageLearning.Kreitner, Robert and Kinicki, Angelo (latest edition). Organizational Behavior. McGraw-Hill Irwin.Morgan, Gareth 2006. Images of Organization. Updated ed., Sage: Thousand Oaks/CA.





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WZ2581: Plant Biotechnology | Pflanzenbiotechnologie

Module Description




Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:In the written, supervised examination (Klausur, 90min), by answering questions under timepressure and without helping material, students demonstrate that they have obtained knowledge inthe areas of plant biotechnology, plant molecular biology and plant biochemistry.The examination assesses the theoretical background and applied knowledge obtained on up-to-date aspects of current research.


(Recommended) Prerequisites:A basic knowledge in genetics, genomics, plant development, biochemistry and/or botany is highlyrecommended

Content:The module consists of a lecture and a seminar part.In the lecture, state-of-the-art methods in plant biotechnology and plant molecular biology areintroduced, and advantages and disadvantages are discussed. Current challenges are highlighted.Topics of the lecture include:- Genetically modified plants: status, regulations, cultivation, concepts;- Generation of genetically modified plants: methods, vector systems;- Concepts for yield improvement;- Concepts for quality improvement;- New potentials derived from basic research;- Model system Arabidopsis: development of new techniques;- Metabolic engineering.


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In the seminar part different speakers from the TUM, which are active in research in plantbiotechnology or plant molecular biology, introduce cutting-edge research projects that take placeon campus. The seminar part is conceived to highlight the exciting research that currently takesplace and advertise opportunities for master thesis projects.

Intended Learning Outcomes:The students have a profound knowledge in plant biotechnology, plant biochemistry and plantmolecular biology. They are aware of new technological approaches and methodology appliedin the fields, including plant transformation, construct and vector design, reporter systems andessential DNA, RNA and protein techniques. They are able to comment critically and reflect ontechnologies and aims of plant biotechnology. They have insight into latest research developmentsin the respective areas, in particular also in research projects that currently take place at the TUM

Teaching and Learning Methods:Lecture: PowerPoint presentations, short movies and use of the black board. Questions to theaudience will actively encourage discussion and enable students to ask questions more freely.Seminar: Power point presentations and use of the black board. The seminar talks are followedby discussions to actively invite students to ask questions. Review papers will be provided asbackground reading.

Media:Lecture: PowerPoint, black board, discussion. Seminars: PowerPoint, black board, discussion.PDFs of the lectures will be made available to the students. Review publications will be madeavailable for background reading on the seminar contends.

Reading List:Biochemistry and Molecular Biology of Plants. Buchanan, Gruissem and Jones, John Wiley &Sons, 2015

Responsible for Module:Poppenberger-Sieberer, Brigitte; Prof. Dr.

Courses (Type of course, Weekly hours per semester), Instructor: Pflanzenbiotechnologie (Seminar, 2 SWS)Frey M [L], Benz J, Frey M, Hammes U, Lindermayr C, Ranf-Zipproth S, Rozhon W, Schneitz K,Schwechheimer C, Stam R, Stegmann M

Pflanzenbiotechnologie (Vorlesung, 2 SWS)Frey M [L], Frey M, Schwab WFor further information in this module, please click campus.tum.de or here.


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WZ2480: Plant Developmental Genetics 2 | Plant Developmental Genetics 2

Module Description

WZ2480: Plant Developmental Genetics 2 | Plant DevelopmentalGenetics 2



Module Level:Master

Language:English



Credits:*4

Total Hours:120

Self-study Hours:60

Contact Hours:60


Description of Examination Method:In the oral examination (30 min.) students explain without additional helping material principles ofplant developmental genetics, describe experimental strategies of plant developmental geneticsand evaluate the relevance of plant developmental genetics for horticulture and plant breeding.The grade of the exam will be the final grade of the module.


(Recommended) Prerequisites:Genetics (WZ0703). Plant Developmental Genetics I (WZ0305). A basic understanding of genetics,molecular biology and cell biology is required.

Content:- photomorphogenesis- flowering time control- floral meristem identity- floral organ identity- floral organogenesis- gametophyte, apomixis- fertilization process- parental control of embryogenesis/seed development


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WZ2480: Plant Developmental Genetics 2 | Plant Developmental Genetics 2

Intended Learning Outcomes:After successful completion of the module students are able to understand the basic concepts ofplant developmental genetics and to evaluate their relevance for problems in horticulture and plantbreeding.

Teaching and Learning Methods:The lecture provides the theoretical background and concepts. During the exercises, in individualor group work on specific selected original literature with presentations students show their abilityto understand the concepts and to critically analyse and evaluate the obtained scientific models.

Media:PowerPoint presentations, chalkboardSlides will be provided online in pdf format. Taped recordings of the lectures will be provided onlineas audio- and videopodcasts.Current literature,

Reading List:Taiz et.al. Plant Physiology and Development 2015 6th edition, Oxford University Press; Smith etal. Plant Biology 2010, Garland Science.Current literature from specific journals will be announced during the lecture.

Responsible for Module:Schneitz, Kay Heinrich; Prof. Dr.

Courses (Type of course, Weekly hours per semester), Instructor: Journal Club Entwicklungsgenetik der Pflanzen (Seminar, 2 SWS)Schneitz K, Torres Ruiz RFor further information in this module, please click campus.tum.de or here.


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WZ1185: Plant Epigenetics and Epigenomics | Plant Epigenetics and Epigenomics

Module Description

WZ1185: Plant Epigenetics and Epigenomics | Plant Epigenetics andEpigenomics



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:75

Contact Hours:75


Description of Examination Method:The examination consists of a presentation (20 min) followed by discussion (10 min). Thepresentation should summarize and interpret the results obtained from analyzing publishedepigenomic datasets using the computational skills aquired during the Computer Practicalsessions. The presentation is a means to measure the student's ability to understand a technical/scientific subject, to analyze and evaluate facts and factors of influence, to summarize the subjectand present it to an audience, and to conduct a discussion about the presented subject


(Recommended) Prerequisites:Basic knowledge of genetics, cell biology, statistics

Content:The course will cover:- Components and functions of the plant epigenome: DNA methylation, histone modifications- Measuring epigenomes: array-based and NGS based bulk and single cell technologies- Analyzing plant epigenomic data: Array and NGS based computational tools for bulk and singlecells- Plant epigenome and environmental variation- Plant epigenome and genetic variation- Epigenetic inheritance in plants: Mitotic and meiotic inheritance- Current perspectives on the agricultural and evolutionary implications of epigenetic inheritance inpl


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WZ1185: Plant Epigenetics and Epigenomics | Plant Epigenetics and Epigenomics

Intended Learning Outcomes:Students will be able to:- Interpret the molecular components of epigenomes - Interpret functions of epigenomes- Identify the sources of population level epigenomic variation- Explain modern measurement technologies- Distinguish the conceptual background of different computational tools - Apply computational tools to epigenomic data - Analyze the implications of epigenetic and epigenomics - Carry out presentation skills

Teaching and Learning Methods:The following teaching methods will be used:- Lectures: The goal of the lectures is to provide an in-depth overview of the main concepts,approaches and research questions in plant epigenetics and epigenomics.

- Computer tutorial: The goal of the computer tutorials is to reinforce the lecture contents withhands-on experience. The main aims are: 1) to get hands-on experience with the type ofepigenomic datasets that is routinely generated in this field; 2) to get hands-on experience withsoftware tools for the analysis of epigenomic datasets; 3) to be able to evaluate the output fromthese software tools, and to use the output as a way to answer concrete biological researchquestions.

- Seminars: The goal of the seminars is to discuss recent scientific literature in plant epigeneticand epigenomics . The aim is to demonstrate how the concepts, approaches and researchquestions presented in the course provide a means to decode complex scientific articles in thisfield.

Media:PowerPoint presentations, software practicals

Reading List:Hand-outs

Responsible for Module:Johannes, Frank; Prof. Dr.

Courses (Type of course, Weekly hours per semester), Instructor: Plant Epigenetics and Epigenomics (Vorlesung, 3 SWS)Johannes F

Plant Epigenetics and Epigenomics - Computer Practical (Praktikum, 2 SWS)Johannes F, Hazarika RFor further information in this module, please click campus.tum.de or here.


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WZ0047: Plant Stress Physiology | Plant Stress Physiology

Module Description




Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:75

Contact Hours:75


Description of Examination Method:The examination contains a written exam (Klausur; essay exam, no multiple choice, withoutthe use of learning aids, 100 % of the grade; 90 min): The written exam assesses how well thestudents remember the theoretical background and methodology and can judge plant stressparameters. Additionally, students are assessed for their ability to translate the obtained knowledgeand practically applied methodology of measuring and qualification of stress responses to a newtopic in plant stress physiology (e.g. by designing an experimental setup to measure plant stress).


(Recommended) Prerequisites:Basic knowledge of Plant Physiology at the B.Sc. level

Content:Definition, symptoms and physiology of stress in crop and model plants (e.g. barley, Arabidopsisthaliana). Influence of diverse biotic and some abiotic stress factors on development, hormonehomeostasis, physiology and yield parameters of plants. Relevance of diverse plant stresses forplant performance in agroecological context. Methods of measuring and quantification of stressresponses in plants (e.g. marker gene expression, calcium influx). Stress resistance, toleranceof plants and its experimental assessment. Measuring stress parameters such as chlorophyllfluorescence, lipid peroxidation, enzyme activities, reactive oxygen species formation.

Intended Learning Outcomes:Upon completion of the module, students are able to remember theoretical background anddefinitions of plant stress physiology. They are able to understand and analyze plant stress


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parameters. Students gain the ability to collect new theoretical knowledge and understandinnovative technologies in plant stress physiology. They are able to self-sufficiently select andapply suitable methods from literature and exercises for measuring plant stress and to evaluateand interpret data. This enables students for the experimental design and evaluation of plantperformance and stress resistance tests under diverse environmental conditions.

Teaching and Learning Methods:In the lecture students gain knowledge about theoretical background, definitions, kinds, physiologyand relevance of plant stress and innovations in assessment and measurement of plant stressphysiology. In the exercise, students practice in small groups, how to apply key methods forquantification of plant stress parameters. They document their data and discuss it with groupmembers and tutors. In the seminar, students are guided … to critically read original researchpapers and present most recent findings in the field. They learn to critically interpret original workand current hypotheses in plant stress physiology.

Media:PowerPoint

Reading List:Reviews and original research papers are provided

Responsible for Module:Hückelhoven, Ralph; Prof. Dr. rer. nat.




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WZ2400: Practical Course: Computing for Highthroughput Biology | Forschungspraktikum Computeranwendungen fürHochdurchsatz-Biologie

Module Description

WZ2400: Practical Course: Computing for Highthroughput Biology |Forschungspraktikum Computeranwendungen für Hochdurchsatz-Biologie



Module Level:Master




Credits:*10

Total Hours:300


Contact Hours:150


Description of Examination Method:In the course, students work on large-scale genomic data sets. The scientific problem, the appliedmethods, the results and the interpretation and discussion of the results will be documented in ascientific report (ca. 20 pages) which will be graded.


(Recommended) Prerequisites:Basic knowledge of computer systems. Familiarity with UNIX/Linux and basic programming skills inR or Python are an advantage.

Content:Agricultural biosciences demand computational skills and in depth knowledge of biological data.During the course, students will practice with some common data analysis methods of highthroughput technology, such as next generation sequencing, gene expression analysis, high-throughput genotyping in individual projects. They will gain knowledge on how to utilize existingbiological databases in their research and how to interpret their own results in the context ofcurrent literature.

Intended Learning Outcomes:In individual research projects, students will become familiar with computational strategies for theanalysis of high dimensional data. Upon completion of this module, students are able to handlelarge datasets and process them with appropriate tools using programming languages like R or


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WZ2400: Practical Course: Computing for Highthroughput Biology | Forschungspraktikum Computeranwendungen fürHochdurchsatz-Biologie

Python. They will be able to analyze datasets and use suitable tests for evaluating the plausibilityof the data and to do quality filtering. They will be able to apply custom pipelines for data analysis.Depending on the specific project this will include the use of public databases, text manipulationwith R or Python, gene expression analysis with bioconductor R, sequence analysis with blast,vmatch, Clustalw, BWA, genome visualization with GBrowse and Next Generation Sequencingworkflows. Students will be able to test the significance of the results and to interpret them in thecontext of current literature.

Teaching and Learning Methods:The advisors will provide experimental data from current research projects or from public datasets.In computer exercises, students will learn to write programming scripts for handling and analyzingthe data. Results will be discussed with the advisors and interpreted using current literature.

Media:Case studies, computer exercises.

Reading List:Project-specific current literature will be provided for each project.


Courses (Type of course, Weekly hours per semester), Instructor: Forschungspraktikum Computeranwendungen für Hochdurchsatz-Biologie (Forschungspraktikum,10 SWS)Gonzalez Segovia E, Avramova VFor further information in this module, please click campus.tum.de or here.


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WZ1578: Project Management in Molecular Plant Biotechnology | Project Management in Molecular Plant Biotechnology

Module Description

WZ1578: Project Management in Molecular Plant Biotechnology | ProjectManagement in Molecular Plant Biotechnology



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:The examination consists of a bipartite presentation (20 min + 20 min) followed by a groupdiscussion (10 min + 10 min). By presenting their own research project (part 1) the student's abilityis tested to summarize the scientific background, to formulate specific research questions, topresent the relevant results and to hold a discussion about the key conclusions. By presentingand discussing the key findings of a chosen scientific publication (part 2) the student's skillsare analysed to evaluate other peoples work in a constructive manner. The quality of the twopresentation parts will be evaluated and equally weighted.

Repeat Examination:

(Recommended) Prerequisites:Basics in genetics, molecular biology and biochemistry. It is recommended to enrol the course inparallel to the master thesis work.

Content:The key aim of the module is to equip master level students with a basic understanding of theresearch process in the field of Molecular Plant Biotechnology, particularly to establish a relevantresearch question, to develop experimental strategies, to conceive a realistic research plan,to perform experiments applying good laboratory practice, to assemble and interpret data at apublication-quality level and to critical discuss these data with peers. The course consists of twoparts: 1) The students analyze, present and critically discuss an actual relevant publication in thefield of Molecular Plant Biotechnology 2) They will develop and present their own research project,carried out in one of the participating labs. Moreover, the students will participate in other student’s


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WZ1578: Project Management in Molecular Plant Biotechnology | Project Management in Molecular Plant Biotechnology

presentations and will be able to contribute ideas in discussions following the presentation. Theywill learn how to critically evaluate their own work and those of others.

Intended Learning Outcomes:At the end of the module students are able to:- extract relevant data from a scientific publication in the field of Plant Molecular Biology/PlantBiotechnology;- assemble these data in a presentation;- orally present the data to an auditorium;- discuss the data and scientific conclusions with teachers and colleagues;- conceive a project proposal in the area of Molecular Plant Biotechnology; - structure it in specific objectives;- design a research plan based on a reasonable combination of experimental approaches;- present and discuss the proposal with peers.

Teaching and Learning Methods:To develop required skills to present their own research project as well as to critically discusspublished studies with peers, each student will prepare and hold a bipartite multimedia-supportedpresentation of their own research project (master thesis) and of one recent, relevant scientificpublication followed by a constructive discussion and feedback by the other course participants.

Media:Multimedia presentation (PowerPoint/Keynote), relevant publications.

Reading List:At the Bench: A Laboratory Navigator, K. Parker; Cold Spring Harbor Laboratory Press, 2005Preparing and Delivering Scientific Presentations; J. Giba and R. Ribes, Springer, 2011


Courses (Type of course, Weekly hours per semester), Instructor: Wissenschaftliches Arbeiten in der Pflanzenbiotechnologie (Seminar, 4 SWS)Poppenberger-Sieberer B, Sieberer TFor further information in this module, please click campus.tum.de or here.


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WZ1584: Quantitative Genetics and Selection | Quantitative Genetics and Selection

Module Description

WZ1584: Quantitative Genetics and Selection | Quantitative Geneticsand Selection



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:In the oral examination (30 min) students show without additional material that they are able toexplain the basic concepts of quantitative genetics and population genetics and their relevance forbreeding. They demonstrate their ability to use the acquired knowledge for the design of optimizedbreeding strategies. The grade of the exam will be the final grade of the module.


(Recommended) Prerequisites:Successful Bachelor courses in applied statistics (e.g. module Statistische Methoden)

Content:Population genetics: genetic constitution of populations, selection and mutationQuantitative genetics: Inbreeding and heterosis, epistasis, phenotypic and genetic variance,resemblance between relatives, heritability, genotype-environment interactionSelection theory: response to selection

Intended Learning Outcomes:After successful completion of the module, students are able to understand the basic conceptsof quantitative genetics and to evaluate their relevance for problems in plant breeding. They canexplain important population genetic concepts such as the Hardy-Weinberg Law, understand theconcepts of linkage and linkage disequilibrium and how they can be estimated in experimentalpopulations. The students become familiar with the theoretical concepts underlying breedingvalues and combining ability and their application in estimating heritability. They can identify and


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WZ1584: Quantitative Genetics and Selection | Quantitative Genetics and Selection

quantify resemblance between relatives. They are able to apply these concepts to selection theoryfor the optimization of breeding programs.

Teaching and Learning Methods:The module consists of a lecture, in which the theoretical background and concepts are developedthrough PowerPoint presentations and chalkboard work. The analysis of experimental data sets incomputer exercises extends the theoretical knowledge.

Media:PowerPoint presentations, chalkboardComputer exercises, application training

Reading List:Falconer and Mackay (1995) Introduction to quantitative genetics; Pearson Education Limited,ISBN: 978-0582243026, 4th edition

Lynch and Walsh (1998): Genetics and Analysis of Quantitative Traits; Sinauer Verlag,ISBN 978 0878934812


Courses (Type of course, Weekly hours per semester), Instructor: Quantitative Genetik und Selektion (Vorlesung, 4 SWS)Schön C, Mayer MFor further information in this module, please click campus.tum.de or here.


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WZ1674: Research Methods and Economic Research Project | Research Methods and Economic Research Project

Module Description

WZ1674: Research Methods and Economic Research Project | ResearchMethods and Economic Research Project



Module Level:Master

Language:English



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:Examination Duration (in min.): 30. The course grade consists of two parts: 50% project report and 50% in-class grade. The in-classgrade consists of equal parts each, proposal presentation, project results presentation, peer reviewof another student's proposal, peer review of another student's project results, and discussion ofapplications of economic concepts.Justification: Students demonstrate their ability to apply economic concepts through classdiscussions and development of project ideas.Students demonstrate their ability to develop an economics research projects through the stages ofproposal presentation, result presentation, and project report.Students demonstrate their ability to evaluate other researchers’ proposals and results in aconstructive manner through presentations of reviews.Students demonstrate their ability to manage resources, and deadlines through timely submissionof the enumerated tasks in stages throughout their research projects.


(Recommended) Prerequisites:BSc. Degree. Prior knowledge of basic ideas of economics and management recommended.

Content:The module provides master level students with an advanced understanding of the researchprocess, its quality criteria, and the application of economic concepts to questions of food andagriculture. Key economic ideas are applied to everyday questions in class discussions based


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on economic texts, podcasts, and others. The development, execution, publication, and review ofdisciplinary and interdisciplinary research is explained in lectures and carried out by each studentfrom beginning to end.Steps include developing project ideas and research questions; using peer-reviewed literatureto frame a student project; designing research plans with the appropriate methods and suitabletechniques of data collection; structuring, preparing, presenting, and critically reviewing researchproposals; data collection, data analysis, and data presentation; discussion and conclusions basedon reflecting own empirical research in the light of the literature; disciplinary, professional, andethical quality criteria of research in economics and management

Intended Learning Outcomes:Students are able to apply economic ideas to questions related to food and agriculture in everydaylife.Students are able to develop and execute an economic research project in the field of agriculture,horticulture, and food.Specifically, students are able to develop a project idea, develop a research question andobjectives based on the project idea and the related scientific literature, and create a researchplan, including the suitable combination of research methods and techniques; defend a researchproposal based on the research plan.Students are able to evaluate other (student) researchers’ proposals and present such evaluationsin a suitable form, orally.Furthermore, students are able to apply their research plan through data collection, data analysis,and presentation of research results, in oral and written form; and are able to evaluate other(student) researchers’ research process, results, and conclusions.Students are able to manage resources and deadlines.

Teaching and Learning Methods:Lectures, class discussions, and guided student project development and project evaluation(project proposal, proposal review, project results, results review, and research report).

Media:Presentation slides, websites, articles and short texts, multi-media (podcasts, video clips), studentpresentations, and reviews.

Reading List:Hartford, Tim (latest edition). The Undercover Economist. Random House: New York.O'Leary, Zina (latest edition). The Essential Guide to Doing Your Research Project. Sage: LosAngeles.Committee on Science, Engineering, and Public Policy,National Academy of Sciences, National Academy ofEngineering, and Institute of Medicine (latest edition). On Being a Scientist: A Guide toResponsible Conduct in Research.


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Courses (Type of course, Weekly hours per semester), Instructor: SeminarResearch Methods and Economics Research Project4 SWSVera [email protected] further information in this module, please click campus.tum.de or here.


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WZ1577: Research Project 'Biotechnology of Horticultural Crops' | Research Project 'Biotechnology of HorticulturalCrops'

Module Description

WZ1577: Research Project 'Biotechnology of Horticultural Crops' |Research Project 'Biotechnology of Horticultural Crops'



Module Level:Master

Language:English



Credits:*10

Total Hours:300


Contact Hours:150


Description of Examination Method:The students conduct a six-week research project in the lab. The work-schedule can be adjustedto the curriculum of the students. After the practical work, a report (approximately 15 to 20 pages)has to be prepared and handed in usually within 4 weeks after the laboratory work has beenconcluded. By preparing a report the students demonstrate the ability to summarise the theoreticalbackground and key aims of the performed experiments and to present the acquired results in aconcise and coherent manner and to interpret and discuss the experimental data in the context ofavailable literature. The grade of the report is based on the accuracy and correctness of the results(50%) and the quality of presentation and evaluation of the data (50%), particularly the descriptionof the theoretical background, presentation of raw data, calculations, application of statistical testsand interpretation and discussion of the results.


(Recommended) Prerequisites:Basic knowledge in plant molecular biology, biochemistry, genetics and development. Practicalexperience with basic lab working techniques such as pipetting and working under sterileconditions. Successful completion of the lecture(s) Crop Biotechnology and/or Plant Biotechnology.

Content:The students work on a research project in the lab on one of the following topics:a) plant hormone signallingb) impact of environmental cues on plant growth and developmentc) heterologous expression of plant proteins


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WZ1577: Research Project 'Biotechnology of Horticultural Crops' | Research Project 'Biotechnology of HorticulturalCrops'

Methods and techniques applied in the framework of the course will depend on the individualproject and may include: cloning, plant transformation, PCR, qPCR, Western blot analysis, proteinexpression and purification, assays for enzymatic activity, EMSA, chromatin IP, fluorescence andelectron microscopy, phenotypic characterisation of plants, cold or heat stress assays, ion leakageassays, dose response assays and quantification of metabolites and nutrients by chromatographicand spectroscopic techniques. Statistical methods are applied for data evaluation. Many of thesetechniques are applicable to other (non-plant) organisms.

Intended Learning Outcomes:Upon completion of this module students:- have acquired competence in several laboratory techniques related to biotechnology inhorticultural crops including cloning of genes, heterologous expression of plant proteins andgeneration and analysis of transgenic plants- can perform experiments in an efficient, time saving manner- can evaluate data and apply statistical tests- are able to design experiments with all necessary controls and interpret the results- have increased their competence in scientific reading and writing - can display scientific data in publication quality

Teaching and Learning Methods:Close theoretical and practical supervision combined with autonomous lab work. Reading originalresearch articles. Reading and application of laboratory protocols. Discussion of the protocols andthe underlying principles of the experiments. Writing of a laboratory book. Written documentation ofthe experiments and results.

Media:Oral instructions, lab protocols, relevant scientific publications.

Reading List:The literature depends on the individual project and will be provided ahead of the course.


Courses (Type of course, Weekly hours per semester), Instructor: Forschungspraktikum Biotechnologie gartenbaulicher Kulturen (Forschungspraktikum, 10 SWS)Poppenberger-Sieberer B, Rozhon W, Sieberer T, Albertos Arranz PFor further information in this module, please click campus.tum.de or here.


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WZ1575: Research Project 'Chemical Genetics' | Research Project 'Chemical Genetics'

Module Description

WZ1575: Research Project 'Chemical Genetics' | Research Project'Chemical Genetics'



Module Level:Master

Language:English



Credits:*10

Total Hours:300


Contact Hours:150




(Recommended) Prerequisites:Basic knowledge in plant molecular biology, biochemistry, genetics and chemistry. Practicalexperience with basic lab working techniques such as pipetting and working under sterileconditions. Successful completion of the lecture(s) Crop Biotechnology and/or Plant Biotechnology.

Content:Chemical Genetics is a novel interdisciplinary approach in which small molecules are used toidentify proteins responsible for the expression of a specific phenotype (forward chemical genetics)or to affect the function of a specific protein and assess the morphological, physiological andmolecular consequences within the organism (reverse chemical genetics). Chemical genetic


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approaches are not only useful in basic research questions, they can also directly lead to thedevelopment of drugs and agrochemicals.This module will teach students a subset of the following techniques by participating in a researchproject in the lab: - Storage and handling of a chemical library;- Design of a chemical genetic screen;- Set up of a chemical genetic screen in conformity with the required quality standards;- Phenotype-based small molecule screening in Arabidopsis thaliana- Phenotype-based small molecule screening horticulturally relevant plant species;- Expression marker-based small molecule screens;- Hit confirmation assays;- Dose response assays;- Structure/function analysis using cheminformatic methods;- Establishment of an in vitro assay to test ligand-target interaction.

Intended Learning Outcomes:Upon completion of this module students are able:- to understand the principles of chemical genetic research approaches;- to assess for which scientific questions a chemical genetic approach might be helpful;- to plan and to carry out basic chemical genetic experiments in plants according to the requiredquality standards;- to interpret and evaluate the results obtained in chemical genetic screens in a written report.

Teaching and Learning Methods:Close theoretical and practical supervision combined with autonomous lab work enables thestudent to understand and apply basic experiments in Plant Chemical Genetics. By discussinglab protocols the student analyses the underlying methodological principles of the experiments.By reading original research articles the student learns to assess quality standards for chemicalgenetic approaches. By writing a research report the student learns to summarize the obtainedresults and discusses it in the context of relevant literature.


Reading List:Plant Chemical Genomics: Methods and Protocols (2014) G. R. Hicks and S. Robert, HumanaPress; Plant Chemical Biology (2014) D. Audenaert and P. Overvoorde, John Wiley & Sons


Courses (Type of course, Weekly hours per semester), Instructor: Forschungspraktikum Chemische Genetik (Forschungspraktikum, 10 SWS)


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Poppenberger-Sieberer B, Rozhon W, Sieberer TFor further information in this module, please click campus.tum.de or here.


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WZ1718: Research Project 'Horticultural Economics and Management' | Research Project 'Horticultural Economics andManagement'

Module Description

WZ1718: Research Project 'Horticultural Economics and Management' |Research Project 'Horticultural Economics and Management'



Module Level:Master

Language:English



Credits:*10

Total Hours:300


Contact Hours:150


Description of Examination Method:The assessment type of the module is a graded research paper (100%). The content of theresearch paper is also communicated in a scientific presentation. With the research paper,students demonstrate the ability to develop a horticultural economics or management researchproject at an advanced level. The students progress through the stages of proposal, revision ofproposal, data collection and analysis, results, revision of result presentation, reflecting results inthe light of the relevant scientific literature and drawing conclusions. Students show their ability tosolve problems independently and seek support, when necessary.


(Recommended) Prerequisites:Knowledge of basic concepts of economics and management is required, demonstrated, e.g., bysuccessful completion of MSc level course in economics or management; experience with guidedresearch in economics and management is required, demonstrated, e.g., by successful completionof a bachelor’s thesis in the field or a research course, such as Research Methods and EconomicResearch Project.

Content:The module provides master level students with an advanced understanding of the researchprocess in economics and management applied to the specific context of horticulture and relatedindustries. Steps of the project include- developing the project idea and the corresponding research questions;


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WZ1718: Research Project 'Horticultural Economics and Management' | Research Project 'Horticultural Economics andManagement'

- using peer-reviewed literature to frame the project; - designing research plans with the appropriate methods and suitable techniques of datacollection; - data collection and data analysis; - data presentation; - discussion and conclusions based on reflecting own empirical research in the light of theliterature; as well as disciplinary, professional, and ethical quality criteria of research in economicsand management applied in the specific context of biobased industries.

Intended Learning Outcomes:After successfully completing the module, students are able to develop and execute a researchproject independently. Specifically, students are able to - develop a project idea- identify relevant scientific literature- develop a research question and objectives based on the project idea and the related scientificliterature- create a research plan, including the suitable combination of research methods- defend a research proposal based on the research plan- apply their research plan through data collection, data analysis- present research results in oral form- write a research report.

Teaching and Learning Methods:The course Research Project Horticultural Economics and Management has an independent studyformat. The supervised independent scientific work in the area of horticultural economics andmanagement serves to allow students to hone their independent research skills in preparation ofa master thesis. While the format allows students to make mistakes and learn from their mistakes,the guidance provided serves to avoid lengthy detours, which would impede timely completion ofthe students’ study program.

Media:Selected original papers; presentation software; flipcharts or similar for guided brainstorming andstructuring.

Reading List:O'Leary, Zina (latest edition). The Essential Guide to Doing Your Research Project. Sage: LosAngeles.

Responsible for Module:Prof. Dr. Vera Bitsch




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WZ1697: 'Research Project 'Metabolite Analyses in Crops' | 'Research Project 'Metabolite Analyses in Crops'

Module Description

WZ1697: 'Research Project 'Metabolite Analyses in Crops' | 'ResearchProject 'Metabolite Analyses in Crops'



Module Level:Master

Language:English



Credits:*10

Total Hours:300


Contact Hours:150





Content:The students work on a research project independently in the laboratory. The project will focus onquantification of primary metabolites, secondary metabolites and/or nutrients in crop plants andfactors/methods for altering the metabolite composition of crops.


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Methods and techniques applied in the framework of the course will depend on the individualproject and may include: - methods for sample preparation including extraction, liquid-liquid extraction and solid phaseextraction- chemical derivatisation of analytes- chromatographic techniques including HPLC, UHPLC, GC, TLC, ion chromatography and columnchromatography- spectroscopic methods including UV/VIS, fluorescence and IR spectroscopy and flamephotometry - mass spectrometry- chiroptical methods including optical rotation dispersion and circular dichroism- luminometry (chemiluminescence and biolominescence)- chemical synthesis of compounds- stable isotope labelling of compounds- application of statistical statistic methods are applied for data evaluation

Intended Learning Outcomes:Upon completion of this module students:- have acquired competence in several laboratory techniques related to metabolite analysis in cops- can apply chromatographic and spectroscopic methods- can perform experiments in an efficient, time saving manner- can evaluate data and apply statistical tests- are able to design experiments with all necessary controls and interpret the results- have increased their competence in scientific reading and writing - can display scientific data in publication quality

Teaching and Learning Methods:Close theoretical and practical supervision combined with autonomous lab work. Reading originalresearch articles. Reading and application of laboratory protocols. Discussion of the protocols andthe underlying principles of the experiments. Writing of a laboratory book. Written documentation ofthe experiments and results.


Reading List:The literature depends on the individual project and will be provided ahead of the course.


Courses (Type of course, Weekly hours per semester), Instructor: Forschungspraktikum Metabolite Analyses in Crops (Forschungspraktikum, 10 SWS)Poppenberger-Sieberer B, Rozhon W, Sieberer T


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WZ2401: Research Project 'Molecular Plant Breeding' | Forschungspraktikum Molekulare Pflanzenzüchtung

Module Description

WZ2401: Research Project 'Molecular Plant Breeding' |Forschungspraktikum Molekulare Pflanzenzüchtung



Module Level:Master




Credits:*10

Total Hours:300


Contact Hours:150


Description of Examination Method:The examination consists of a project report (approx. 15-20 pages), which is to be submitted at theend of the module and is graded. The report contains a short introduction to the topic, the scientificresearch questions, the applied material and methods, the results and a discussion of the results inthe context of current literature.

Repeat Examination:

(Recommended) Prerequisites:Basic knowledge in molecular genetics and plant breeding. Previous practical experience withmolecular techniques and/or handling of plants is an advantage.

Content:The individual projects that students will work on encompass current topics of plant breedingand address different aspects of ongoing research projects. The projects cover the acquisitionof scientific methods and comprise molecular genetic laboratory and/or modern phenotypingmethods for agronomic traits. Depending on the individual project, different molecular techniquesare applied (e.g. DNA extraction from plant material, PCR, DNA cloning and sequencing, analysisof molecular markers, gene expression analysis). We also offer topics related to drought stressin field or greenhouse experiments with a strong focus on application in crop plants, wherephysiological and agronomic traits are assessed. In projects with a focus on phenotyping, studentswill learn how to plan and conduct field or greenhouse experiments and how specific phenotypesare measured. During the project, the appropriate scientific analysis and interpretation of the


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WZ2401: Research Project 'Molecular Plant Breeding' | Forschungspraktikum Molekulare Pflanzenzüchtung

data will be addressed, which includes e.g. statistical data analysis, mapping of genes/QTL,characterization of genes, literature work.

A list of current projects is available at www.wzw.tum.de/plantbreeding. Upon agreement owntopics can be suggested.

Intended Learning Outcomes:In the research project "Molecular Plant Breeding" the students will learn to design experimentsin the lab or greenhouse/field in individual case studies. They gain experience in planningand conducting the experiments, organizing the work and analyzing experimental data. Uponsuccessful completion of the research project, students are able to scientifically analyze, interpret,discuss and present their obtained results in the context of current literature.

Teaching and Learning Methods:Depending on the individual project, the students will gain and practice laboratory skills and/orknowledge on handling of plants in greenhouse/field experiments through hands-on lab practicalsand/or hands-on phenotyping methods. Through instruction by their advisor, they will learn todefine specific scientific questions related to their individual topic, to find solutions to solve thesequestions and to discuss the results. By preparing an oral presentation and a final written report,students learn how to adequately describe their experiments, how to structure the results and howto discuss the results in view of current literature.

Media:Experimental studies related to current research projects, current literature

Reading List:Project-specific current literature will be provided for each project.General: - Grotewold, Chappell and Kellogg: Plant Genes, Genomes and Genetics. Wiley-Blackwell, 2015.ISBN: 978-1-119-99887-7- Brown: Genomes 4. Garland Science, 2017. ISBN 978-0-815-345084- Abraham Blum: Plant Breeding for Water-limited Environments, Springer Science + BusinessMedia S.A.; ISBN-10:1441974903


Courses (Type of course, Weekly hours per semester), Instructor: Forschungspraktikum Molekulare Pflanzenzüchtung (Forschungspraktikum, 10 SWS)Avramova V, Mayer M, Valle Torres D, Mohler VFor further information in this module, please click campus.tum.de or here.


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WZ1576: Research Project 'Plant Growth Regulation' | Research Project 'Plant Growth Regulation'

Module Description

WZ1576: Research Project 'Plant Growth Regulation' | Research Project'Plant Growth Regulation'



Module Level:Master

Language:English



Credits:*10

Total Hours:300


Contact Hours:150





Content:As primary resource of biomass, plants grow by continuous formation of modular organs. The netgrowth is the result of different growth parameters including the rate of organ formation, the size ofthe single organs and the overall amount of formed organs. Moreover, it is strongly dependent onenvironmental conditions (nutrients, water, light and temperature) and the germplasm (constitution


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of limiting genetic factors and overall genome structure). Plant growth optimization is thus amultifactorial process and strongly dependent on the specific utilization of the crop.The present research project deals with the molecular characterization of genetic factors whichact limiting on the different growth parameters mentioned above. Known and novel importantyield affecting loci are identified and positioned in the established regulatory network. Methodsand techniques applied in the framework of the course will depend on the individual project andmay include: Quantitative analysis of shoot growth (leaf formation rate, determination of meristemsize), quantitative analysis of shoot regeneration in tissue culture, gene expression analysis(GUS reporter/qPCR/Western blotting), cloning of T-DNA constructs, plant transformation, PCRgenotyping, protein expression and purification, fluorescence and electron microscopy.

Intended Learning Outcomes:Upon completion of this module students are able:- to understand key scientific aims in the field of Plant Growth Regulation;- to assess methods to identify relevant molecular factors controlling plant growth;- to experimentally characterize regulatory pathways affecting leaf formation rate, elongationgrowth and shoot architecture;- to interpret results from biochemical, genetic and physiological experiments dealing with PlantGrowth Regulation.- to present the obtained data in a written report and to discuss the results in the context of relevantliterature.

Teaching and Learning Methods:Close theoretical and practical supervision combined with autonomous lab work enables thestudent to understand and apply basic experiments in Plant Growth Regulation. By discussing labprotocols the student analyses the underlying methodological principles of the experiments. Byreading original research articles the student learns to assess quality standards for experimentsanalyzing plant growth parameters. By writing a research report the student learns to summarizethe obtained results and discusses it in the context of relevant literature.


Reading List:Plant Physiology and Development (2014) L. Taiz and E. Zeiger, Sinauer Associates Inc.,U.S.; Plant Biotechnology and Agriculture: Prospects for the 21st Century (2011) A. Altman and P. M.Hasegawa, Academic Press.


Courses (Type of course, Weekly hours per semester), Instructor: Forschungspraktikum Wachstumsregulation der Pflanzen (Forschungspraktikum, 10 SWS)Poppenberger-Sieberer B, Sieberer T, Rozhon W


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WZ1549: Research Project 'Plant Nutrition' | Research Project 'Plant Nutrition'

Module Description

WZ1549: Research Project 'Plant Nutrition' | Research Project 'PlantNutrition'



Module Level:Master

Language:English



Credits:*10

Total Hours:300


Contact Hours:150


Description of Examination Method:In the oral presentation students are expected to present and discuss their research resultsaccording to the scientific practice.They will be asked to discuss and critically evaluate the achieved results with respect to theapplied methods and compared to current literature.


(Recommended) Prerequisites:Basic knowlegde in plant nutrition

Content:Current research topics in plant nutrition e.g., plant responses to abiotic stress (nutrients, drought,salinity, heat) in cooperation with active research groups. Studies focus on specific experimental and methodological skills in current plant nutrition in orderto investigate yield developement, nutrient acquisition and soil nutrient or water status. Thesemethods include destructive and non-destructive measurements, plant and soil sensor techniques,digital imaging, chemical analysis and data analysis by statistical methods and specific algorithms.

Intended Learning Outcomes:At the end of the modul students will be able to- to apply the theoretical background knowledge on the selected research area (e.g. the causesand consequences of abiotic stress to plants)


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WZ1549: Research Project 'Plant Nutrition' | Research Project 'Plant Nutrition'

- to utilize specific and appropriate methods for data collection and evaluation of the achievedresults- to apply specific techiques of data analysis

Teaching and Learning Methods:Practicals, projects

Media:presentations, prescripts, instruction manuals

Reading List:Original papers

Responsible for Module:Urs Schmidhalter [email protected]

Courses (Type of course, Weekly hours per semester), Instructor: Research Project 'Plant Nutrition'Excercise10 SWS

Urs SchmidhalterLehrstuhl für Pflanzenernährung [email protected]

Yuncai HuLehrstuhl für Pflanzenernährung [email protected]

Sabine von TucherLehrstuhl für Pflanzenernährung [email protected] further information in this module, please click campus.tum.de or here.


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WZ1921: Strategy, Supply Chain Management, and Sustainability in Agribusiness and Food Industry | Strategy, SupplyChain Management, and Sustainability in Agribusiness and Food Industry

Module Description

WZ1921: Strategy, Supply Chain Management, and Sustainability inAgribusiness and Food Industry | Strategy, Supply Chain Management,and Sustainability in Agribusiness and Food Industry



Module Level:Master

Language:English



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:The assessment type for the module is a graded learning portfolio (100%). The portfolio includesmemorandums addressing 9-10 of the case studies discussed in class; and a learning statementaddressing conceptual, scientific and personal learning. Through the case memorandums, thestudents show the ability to discuss the assigned case questions by selecting and applying suitabletheoretical concepts to supply chain management and sustainability challenges in the specificcontext of agribusiness and the food industry. In the learning statement, students demonstrate theability to reflect on the semester long learning process and summarize the insights gained.


(Recommended) Prerequisites:Solid economic and management background; knowledge of basic concepts of strategic analysis,planning, and management (e.g., industry analysis, horizontal and vertical coordination, andSWOT), as well as the ability to apply these concepts; furthermore, knowledge of value chainmanagement is required (e.g., theoretical background, supply chain dynamics, actors andpartnerships, governance). Successful completion of a management course on M.Sc. levelrequired, e.g., agribusiness management or value chain management. Medium level experience indesk research and scientific writing is required.


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Content:The module builds on key concepts of supply chain management, strategy, and sustainability toprovide master level students with the competency to evaluate pertinent issues in agribusiness andfood industry supply chains.Topics covered include:- value propositions, creating and capturing added value in agribusiness and the food industry- management of customers, suppliers, and other stakeholders- innovation in supply chains, sustainability as an innovation, sustainable supply chains- CSR (corporate social responsibility) and sustainability measurement- implementation of a sustainability strategy, as well as costs and benefits of sustainable practicesin agribusiness and the food industry- ethical issues in supply chain management.

Intended Learning Outcomes:After successfully completing of the module, students are able to evaluate processes of supplychains management in agribusiness and the food industry. Specifically, students are able to- evaluate value propositions, as well as plans for creating and capturing value- evaluate the management of customers, suppliers, and other stakeholders- independently choose scientific models or concepts relevant to the analysis process ofagricultural and food industry supply chains and justify their choice- evaluate the implementation a CSR concept or sustainability strategy, and monitor its effects onoperations, suppliers, associates, and customers- identify and analyze ethical issues in supply chain management and to recommend how to applyethical practices.

Teaching and Learning Methods:The course Strategy, Supply Chain Management, and Sustainability in Agribusiness and theFood Industry has a seminar format based on the case study method. The seminar format isimplemented based on case descriptions of problems, challenges, and innovations in agribusinessand food industry supply chains. Through individually prepared class discussions and group work,students develop the ability to critically reflect and apply concepts of strategy, supply and valuechain management, and sustainability requirements in the context of agribusiness and the foodindustry. During class discussions and group presentations, students reflect on their experiences,prior knowledge, and assignments to develop an in-depth understanding of current challenges insupply chains and how to address the.

Media:Reading assignments; case descriptions; presentation software; discussion facilitation supportmedia, such as flipcharts and discussion boards; video clips and podcasts.

Reading List:Current articles from scientific journals as appropriate.Selected chapters from


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Bouchery, Corbett, Fransoo, and Tan (2017): Sustainable Supply Chains: A Research-BasedTextbook on Operations and Strategy. Springer: Berlin, Heidelberg, Germany.Pullmann and Wu (2011): Food Supply Chain Management: Economic, Social and EnvironmentalPerspectives. Routledge, New York, US.

Responsible for Module:Bitsch, Vera; Prof. Dr. Dr. h.c.


For further information in this module, please click campus.tum.de


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WZ1567: Sustainability: Paradigms, Indicators, and Measurement Systems | Sustainability: Paradigms, Indicators, andMeasurement Systems

Module Description

WZ1567: Sustainability: Paradigms, Indicators, and MeasurementSystems | Sustainability: Paradigms, Indicators, and MeasurementSystems



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:The assessment type for the module is a graded report (10 pages). The report includes threesections: (1) critical analysis of a published empirical sustainability study in the context ofits sustainability definitions and authors’ backgrounds; (2) critical analysis of a sustainabilitymeasurement system in use with regard to fulfilling requirements to be met by indicators andindicator systems; (3) critical analysis of a public sustainability claim by an organization froma consumer or citizen point of view. Each analysis is also presented by each student. Throughreports, the students demonstrate the ability to understand relevant research, measurementsystems and claims, as well as critically analyze and discuss these issues. Through thepresentation and discussion of each analysis, students demonstrate their ability to communicatethese critical issues and further reflect on each topic in the light of other students’ questions andpresentations.


(Recommended) Prerequisites:Basic knowledge and understanding of economic and management concepts as well as of socialscience research methods is required.

Content:The development of a differentiated understanding of sustainability requires the critical analysisand reflection of sustainability concepts on multiple levels. In the module the following levels are


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systematically analyzed and discussed based on guided discussions of assigned readings andmaterials developed by students based on literature and internet research:- Paradigms and value judgments in research on and evaluation of sustainability;- Economic, environmental and social aspects of sustainable production, marketing, andconsumption;- Measurement systems for sustainability on different levels (products, supply chains etc.);- Public and private standards, sustainability certifications and communication;- Consequences of measurement systems and their foci, e.g., on environmental aspects, such ascarbon footprint, or on social aspects, such as fair tradeThese topics are discussed in the context to current and controversial issues regardingsustainability in science and in society.

Intended Learning Outcomes:After successfully completing the module students are able to - Analyze and evaluate the consequences of different paradigms on the definition andunderstanding of sustainability and its use in published scientific articles;- Analyze and evaluate sustainability measurement systems on the product, enterprise, and supplychain levels as well as their potential consequences;- Evaluate public sustainability claims based on the research of available information sources;- Apply a differentiated understanding of sustainability in an interrelated, globalized context withdiffering value systems and priorities in scientific and practical questions and issues.

Teaching and Learning Methods:The course “Sustainability: Paradigms, Indicators, and Measurement Systems” has a seminarformat based on assigned readings and student presentations on assigned topic areas.After an introductory guided class discussion on assumptions and implicit sustainabilitydefinitions of participants, readings are assigned and discussed in class to lay the basis forlater student presentations. Through individual document research and individually preparedclass presentations, students develop the ability to critically reflect on sustainability research,sustainability indicators and measurement systems, as well as sustainability claims by variousactors and organizations. Through presentations and concept discussions, students develop in-depth knowledge of sustainability issues and hone their critical thinking skills. A final discussionsummaries students’ learning and additional findings throughout the semester in the concept ofwicked problems.

Media:Reading assignments; use of data bases for literature research; presentation software; discussionfacilitation support media, such as flipcharts and discussion boards; video clips and podcasts.

Reading List:National Resource Council 2010, Toward Sustainable Agricultural Systems in the 21st Century,Washington/D.C.: National Academies Press.Current articles on sustainability paradigms, requirements of sustainability indicators and indicatorsystems, and applications.


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WZ2763: Transcriptional and Posttranscriptional Regulation in Eukaryotes | Transcriptional and PosttranscriptionalRegulation in Eukaryotes

Module Description

WZ2763: Transcriptional and Posttranscriptional Regulation inEukaryotes | Transcriptional and Posttranscriptional Regulation inEukaryotes



Module Level:Master

Language:English



Credits:*5

Total Hours:150

Self-study Hours:90

Contact Hours:60


Description of Examination Method:In the written examination (60 min, Klausur) students demonstrate by answering questions undertime pressure and without helping material the theoretical knowledge of components, processesand mechanisms of transcriptional and posttranscriptional regulation in eukaryotes and of methodsto study them. By comparing different techniques applied to the study of transcriptional regulation studentdemonstrate that they can evaluate their advantages and disadvantages for answering a givenexperimental question.Their ability to analyse and evaluate a research paper and to structure the content such that theycan clearly explain it to an audience, is examined during their presentation of a research paperassigned to them in a PowerPoint presentation. To demonstrate that they have acquired the abilityto discuss scientific data the students generate questions about the paper to guide a discussionafter their presentation. The goals of the module have been reached and the module has been passed when the totalgrade of written exam and presentation (3:2) is better than 4.1.


(Recommended) Prerequisites:Fundamental knowledge in genetics and molecular biology is highly recommended. Theparticipants should have passed one or more bachelor level lectures in genetics, genomics,systems biology, developmental genetics of plants and/or developmental genetics of animals.


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Content:The development of an organism and its developmental and physiological responses to theenvironment are based on a precise spatio-temporal regulation of genes. The lecture andassociated seminar will cover mechanisms of gene regulation. They are suitable for MSc studentsas well as highly motivated and advanced BSc students.

The lecture (90 mins per week) will cover: - Transcriptional machinery- Structure of eukaryotic chromatin- Epigenetic modifications and chromatin remodelling - Gene activation and repression - Transcription factors - Combinatorial transcription factor complexes in signal integration- Regulation of transcription factors by posttranslational modification- Transcription factor evolution and its role in acquisition of novel traits - RNA molecules and RNA processing- Regulatory RNAs - Methods to study transcriptional regulation

The accompanying seminar (90 min per week), will include discussions on a range of originallandmark papers covering different aspects of transcriptional regulation comprised in the lecture(most examples will be from plants). Furthermore, students will get advice on how to give a goodpresentation and will get feedback on the quality of their own presentation and advice for possibleimprovement.

Intended Learning Outcomes:At the end of the module students have a profound understanding of the role and of differentmechanisms of transcriptional and posttranscriptional regulation in eukaryotes. They knowdifferent techniques of how to study eukaryotic chromatin, transcription factor-DNA interactions(such as promoter deletion series for identification of cis-elements, ChIP, DIP, EMSA, microscalethermophoresis), their advantages and disadvantages. Thus, they are able to determine the correctexperimental approach to address research questions in transcriptional and posttranscriptionalregulation. Additionally, they are able to critically evaluate unfamiliar results in original papersrelated to transcriptional and posttranscriptional regulation. In the seminar, they have acquiredpractice in presenting original research data and gained the ability to discuss such data with theircolleagues.

Teaching and Learning Methods:LECTURE: Presentation with PowerPoint and black board. The presentation will be interruptedwith questions to the students to keep their active attention and to induce reflection on the contentof the lecture (Sokrates' midwife method). Short breaks will give the possibility to students to askquestions during the lecture. SEMINAR: Students will use PowerPoint to present a research paper, which has been assignedto them. The instructor will help in guiding the discussions and will contribute questions to make


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students aware of details and induce their reflection of the content. They acquire practice inpresenting original research data and gained the ability to discuss such data with their colleagues.

Media:LECTURE: Power point, black board, discussion. PDFs of the lectures will be made available tothe students. SEMINAR: Powerpoint, black board, discussion.

Reading List:LECTURE:Benjamin Pierce, Genetics: a conceptual approach, 2013 5th edition (or newer)James Watson, Molecular Biology of the Gene, 2014 7th edition (or newer)Michael Carey et al. Transcriptional regulation in Eukaryotes, 2009, 2nd edition (or newer)Original articles used to increase the content of the lecture will be cited on the power point slides. SEMINAR: Original articles will be distributed to the individual speakers in the first seminar session.

Responsible for Module:Gutjahr, Caroline; Prof. Dr.

Courses (Type of course, Weekly hours per semester), Instructor: Transcriptional and Posttranscriptional Regulation in Eukaryotes with Special Emphasis on Plants(Seminar, 2 SWS)Gutjahr C

Transcriptional and posttranscriptional regulation in eukaryotes (Vorlesung, 2 SWS)Gutjahr C, Torres Ruiz RFor further information in this module, please click campus.tum.de or here.


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SZ03031: Intensive Course German as a Foreign Language A2.1 | Blockkurs Deutsch als Fremdsprache A2.1

Requirement Proof of Proficiency in German | NachweisDeutschkenntnisse

Module Description

SZ03031: Intensive Course German as a Foreign Language A2.1 |Blockkurs Deutsch als Fremdsprache A2.1




Language:German



Credits:*4

Total Hours:120

Self-study Hours:60

Contact Hours:60


Description of Examination Method:1 final exam 90 min. (100%) - no learning aids permittedThe midterm exam is intended to monitor students' learning progress and reduce the amountof material covered in the final exam. Written exams will assess students level of acquisition ofthe learning outcomes specified in the module description. Specifically, exam questions focus onthe usage of vocabulary and grammar, as well as reading comprehension and text production.Listening comprehension is tested by posing questions based on audio samples to which studentsrespond in writing. Verbal skills are evaluated using appropriate prompts from sample print dialogs.

Repeat Examination:

(Recommended) Prerequisites:Firm knowledge of level A1.2; placement test with the achievement A2.1

Content:In this module, students acquire basic knowledge of the German language, including interculturaland regional aspects, that will enable them to express themselves in everyday situations, suchas traveling, at the doctor’s office, searching for an apartment, in a department store, amongcolleagues, friends or neighbors.


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Students learn and practice basic vocabulary and expressions on topics such as education,profession, health and traveling. Students learn and practice using simply structured main andsubordinate clauses (that, because, and, than, etc.), employing the preterit (modal verbs) andperfect, as well as the comparative, the superlative and the declination of the adjective. Theyreinforce and expand the usage of the prepositions in the accusative and dative case. Students learn strategies for successful verbal and written communication despite minimallanguage skills. Opportunities will be made available for effective, self-motivated, independentlearning. Students acquire teamwork skills through collaborative work in multinational mixedgroups.

Intended Learning Outcomes:The module is based on level A2 of GER. Upon completion of this module, students are able to understand and use simple sentences andexpressions in conversations on a broad spectrum of familiar topics. These conversations arebased on basic information concerning everyday life and subjects relevant to studying or working,including sociocultural aspects of German-speaking countries. For example, students are able to describe themselves and other people, their living situation,state of health, leisure time activities and job situation.Students are able to understand longer texts and letters about familiar topics that includeforeseeable information and are written in simple language about everyday life or job relatedtopics. Students are able to compose short, informative texts or notifications about basic situationsin everyday life or situations related to studying.

Teaching and Learning Methods:The module consists of a seminar covering material appropriate to desired learning outcomesand encompassing relevant listening, reading, writing and speaking exercises. These exercisesmay take the form of individual, partner or group work, implementing a communicative andactivity-oriented approach. Students have the opportunity to deepen basic knowledge conveyedin the seminar through independent study and work, using specified (online) materials coveringfundamental grammar and communication patterns of the foreign language.Voluntary homework (preparation and follow-up work) reinforces classroom and structuredlearning.

Media:Textbook; multimedia-based teaching and learning materials (black board, overheads, exercisesheets, image, film, etc.) also online

Reading List:to be announced in the Class



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Courses (Type of course, Weekly hours per semester), Instructor: Blockkurs Deutsch als Fremdsprache A2.1 (Seminar, 4 SWS)Gastdozentin DaF A, Kostial M, Kretschmann A, Schimmack BFor further information in this module, please click campus.tum.de or here.


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SZ0302: German as a Foreign Language A1.2 | Deutsch als Fremdsprache A1.2

Module Description

SZ0302: German as a Foreign Language A1.2 | Deutsch alsFremdsprache A1.2




Language:German



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:1 final written exam 90 min. (100%) - no learning aids permittedThe midterm exam is intended to monitor students' learning progress and reduce the amount ofmaterial covered in the final exam. Written exams will assess students level of acquisition of the learning outcomes specified in themodule description. Specifically, exam questions focus on the usage of vocabulary and grammar,as well as reading comprehension and text production. Listening comprehension is tested byposing questions based on audio samples to which students respond in writing. Verbal skills areevaluated using appropriate prompts from sample print dialogs.

Repeat Examination:


Content:In this module, students acquire basic knowledge of the German language, including interculturaland regional aspects, that will enable them to express themselves in everyday situations, such asshopping, going to a restaurant, public transport etc. Students learn and practice basic vocabulary on topics such as family, occupation, leisure time,food and living. They learn to talk about matters of everyday life in simply structured sentences inthe tenses simple present and present perfect simple and practice the usage of modal verbs, theimperative and the two-case preposition.


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Students learn different strategies for effective, self-motivated, independent learning. They acquireteamwork skills through collaborative work in multinational mixed groups.

Intended Learning Outcomes:The module is based on level A1 of GER. Upon completion of this module, students are able to express themselves using everydayexpressions and simple sentences. Students are able to answer simple questions about themselves and their family and posequestions, in kind, to a dialog partner. They are able to arrange meetings and provide informationabout themselves in writing. They are able to describe daily routines in the past and present tenseand can successfully communicate their wishes in everyday situations, such as going shopping oreating in a restaurant, with dialog partners who are willing to help and speak slowly and clearly.



Reading List:


Courses (Type of course, Weekly hours per semester), Instructor: Deutsch als Fremdsprache A1.2 (Seminar, 4 SWS)Bakker S, Geishauser C, Graf G, Gröbl J, Keza I, Nierhoff-King B, Pinskaia I, Pletschacher T,Schlömer A, Zerfass AFor further information in this module, please click campus.tum.de or here.


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Module Description





Language:German



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:1 final exam 90 min. (100%) - no learning aids permittedThe midterm exam is intended to monitor students' learning progress and reduce the amountof material covered in the final exam. Written exams will assess students level of acquisition ofthe learning outcomes specified in the module description. Specifically, exam questions focus onthe usage of vocabulary and grammar, as well as reading comprehension and text production.Listening comprehension is tested by posing questions based on audio samples to which studentsrespond in writing. Verbal skills are evaluated using appropriate prompts from sample print dialogs.

Repeat Examination:


Content:In this module, students acquire basic knowledge of the German language, including interculturaland regional aspects, that will enable them to express themselves in everyday situations, suchas traveling, at the doctor’s office, searching for an apartment, in a department store, amongcolleagues, friends or neighbors.

Students learn and practice basic vocabulary and expressions on topics such as education,profession, health and traveling. Students learn and practice using simply structured main andsubordinate clauses (that, because, and, than, etc.), employing the preterit (modal verbs) and


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perfect, as well as the comparative, the superlative and the declination of the adjective. Theyreinforce and expand the usage of the prepositions in the accusative and dative case. Students learn strategies for successful verbal and written communication despite minimallanguage skills. Opportunities will be made available for effective, self-motivated, independentlearning. Students acquire teamwork skills through collaborative work in multinational mixedgroups.

Intended Learning Outcomes:The module is based on level A2 of GER. Upon completion of this module, students are able to understand and use simple sentences andexpressions in conversations on a broad spectrum of familiar topics. These conversations arebased on basic information concerning everyday life and subjects relevant to studying or working,including sociocultural aspects of German-speaking countries. For example, students are able to describe themselves and other people, their living situation,state of health, leisure time activities and job situation.Students are able to understand longer texts and letters about familiar topics that includeforeseeable information and are written in simple language about everyday life or job relatedtopics. Students are able to compose short, informative texts or notifications about basic situationsin everyday life or situations related to studying.



Reading List:


Courses (Type of course, Weekly hours per semester), Instructor: Deutsch als Fremdsprache A2.1 (Seminar, 4 SWS)Aßmann J, Bauer G, Kovacs O, Nierhoff-King B, Stiebeler H, Zünkler CFor further information in this module, please click campus.tum.de or here.


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Module Description





Language:German



Credits:*6

Total Hours:180


Contact Hours:60


Description of Examination Method:1 final exam 90 min. (100%) - no learning aids permittedWritten exams will assess students level of acquisition of the learning outcomes specified in themodule description. Specifically, exam questions focus on the usage of vocabulary and grammar,as well as reading comprehension and text production. Listening comprehension is tested byposing questions based on audio samples to which students respond in writing. Verbal skills are evaluated using appropriate prompts from sample print dialogs.

Repeat Examination:


Content:In this module, students acquire basic knowledge of the German language, including interculturaland regional aspects, that will enable them to express themselves in everyday situations, suchas traveling, at the doctor’s office, searching for an apartment, in a department store, amongcolleagues, friends or neighbors.Students reinforce and augment basic vocabulary and expressions on topics such as education,profession, living and traveling. Students learn and practice classifying and using an extendedspectrum of main and subordinate clauses (final clause, indirect questions, temporal subordinateclause, causal sentence). They also learn to employ the preterit (modals verbs) and perfect andwill repeat and expand the usage of the prepositions and the declination of the adjective.


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Students learn strategies for successful verbal and written communication despite minimallanguage skills. Opportunities will be made available for effective, self-motivated, independentlearning. Students acquire teamwork skills through collaborative work in multinational mixedgroups.

Intended Learning Outcomes:The module is based on level A2 of GER. Upon completion of this module, students are able to understand and use simple sentences andexpressions in conversations on a broad spectrum of familiar topics. These conversations arebased on basic information concerning everyday life and subjects relevant to studying or working,including sociocultural aspects of German-speaking countries. For example, students are able to describe themselves and other people, their living situation,state of health, leisure time activities and job situation. Students are able to communicate invarious situations, for example, when searching for an apartment, traveling or on holiday, and areable to report about their experiences in simple standard language.Students are able to understand longer texts and letters about familiar topics that includeforeseeable information and are written in simple language about everyday life or job relatedtopics. Students are able to compose short, informative texts or notifications about basic situationsin everyday life or situations related to studying.



Reading List:


Courses (Type of course, Weekly hours per semester), Instructor: Deutsch als Fremdsprache A2.2 (Seminar, 4 SWS)Aßmann J, Bauer G, Feistle C, Hagner V, Kostial M, Schneider S, Stiebeler H, Thiessen EFor further information in this module, please click campus.tum.de or here.


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SZ0322: German as a Foreign Language A2.1 plus A2.2 | Deutsch als Fremdsprache A2.1 plus A2.2

Module Description

SZ0322: German as a Foreign Language A2.1 plus A2.2 | Deutsch alsFremdsprache A2.1 plus A2.2



Module Level: Language:German



Credits:*8

Total Hours:240


Contact Hours:90


Description of Examination Method:1 final exam 90 min. (100%) - no learning aids permittedWritten exams will assess students level of acquisition of the learning outcomes specified in themodule description. Specifically, exam questions focus on the usage of vocabulary and grammar,as well as reading comprehension and text production. Listening comprehension is tested byposing questions based on audio samples to which students respond in writing. Verbal skills are evaluated using appropriate prompts from sample print dialogs.

Repeat Examination:


Content:In this module, students acquire basic knowledge of the German language, including interculturaland regional aspects, that will enable them to express themselves in everyday situations, suchas traveling, at the doctor’s office, searching for an apartment, in a department store, amongcolleagues, friends or neighbors.Students learn and practice basic vocabulary and expressions on topics such as education,profession, health and traveling. They learn and practice classifying and using an extendedspectrum of main and subordinate clauses (final clause, indirect questions, temporal subordinateclause, causal sentence). They learn to employ the preterit (modal verbs) and perfect, how to usethe comparative and the superlative, as well as the declination of the adjective (in the nominative,


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accusative and dative case). They also reinforce and expand the usage of prepositions in theaccusative and dative case. Students learn strategies for successful verbal and written communication despite minimallanguage skills. Opportunities will be made available for effective, self-motivated, independentlearning. Students acquire teamwork skills through collaborative work in multinational mixedgroups.

Intended Learning Outcomes:The module is based on level A2 of GER. Upon completion of this module, students are able to understand and use simple sentences andexpressions in conversations on a broad spectrum of familiar topics. These conversations arebased on basic information concerning everyday life and subjects relevant to studying or working,including sociocultural aspects of German-speaking countries. For example, students are able to describe themselves and other people, their living situation,state of health, leisure time activities and job situation. Students are able to communicate invarious situations, for example, when searching for an apartment, traveling or on holiday, and areable to report about their experiences in simple standard language.Students are able to understand longer texts and letters about familiar topics that includeforeseeable information and are written in simple language about everyday life or job relatedtopics. Students have the ability to compose short, informative texts or notifications about basicsituations in everyday life or situations related to studying.



Reading List:


Courses (Type of course, Weekly hours per semester), Instructor: Deutsch als Fremdsprache A2.1 plus A2.2 (Seminar, 6 SWS)


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Hanke C, Reulein C, Schimmack BFor further information in this module, please click campus.tum.de or here.


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campus.tum.de


Alphabetical Index

A[WZ6428] Analytical Methods in Horticulture, Agriculture and PlantBiotechnology | Analytical Methods in Horticulture, Agriculture and PlantBiotechnology

12 - 13

[WZ2620] Applications of Evolutionary Theory in Agriculture: PopulationGenomics of Crop Pathogens and Disease Management | Applications ofEvolutionary Theory in Agriculture: Population Genomics of Crop Pathogens andDisease Management

14 - 16

B[WZ3098] Basics of Metabolomics | Basics of Metabolomics 19 - 21[WZ6429] Biotechnology in Horticulture | Biotechnology in Horticulture 22 - 23

C[CS0154] Computational Biology and Functional Genomics | ComputationalBiology and Functional Genomics

17 - 18

[WZ1673] Crop Biotechnology | Crop Biotechnology 24 - 25[WZ1720] Crop Breeding | Crop Breeding 26 - 27[WZ1696] Crop Genomics | Crop Genomics 28 - 29[WZ1671] Crop Physiology: Growth and Development of Plants | CropPhysiology: Growth and Development of Plants

6 - 7

[WZ1672] Crop Quality: Basics of Quality Control and Assurance | CropQuality: Basics of Quality Control and Assurance

8 - 9

EElective Courses | Elective Courses 10[WZ1588] Evolutionary Genetics of Plants and Microorganisms | EvolutionaryGenetics of Plants and Microorganisms

30 - 31


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G[WZ6430] Genetic and Environmental Control of Vegetal Plants | Genetic andEnvironmental Control of Vegetal Plants

32 - 33


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[SZ0322] German as a Foreign Language A2.1 plus A2.2 | Deutsch alsFremdsprache A2.1 plus A2.2

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H[WZ1035] Host-Parasite-Interaction | Host-Parasite-Interaction 34 - 35[WZ1545] Human Resource Management in Agriculture and RelatedIndustries | Human Resource Management in Agriculture and Related Industries

36 - 37

I[SZ03031] Intensive Course German as a Foreign Language A2.1 | BlockkursDeutsch als Fremdsprache A2.1

93 - 95

M[WZ1589] Marker-assisted Selection | Marker-assisted Selection 38 - 39[WZ2049] Methods for Analysis of Next Generation Sequencing data |Methods for Analysis of Next Generation Sequencing data

40 - 41

[WZ8128] Methods of Genome Analysis | Methoden der Genomanalyse 44 - 46[WZ6431] Model Systems and Crop Quality | Model Systems and Crop Quality 42 - 43


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P[WI001205] People in Organizations: Managing Change and Sustainabilityin Agribusiness and the Food Industry | People in Organizations: ManagingChange and Sustainability in Agribusiness and the Food Industry

47 - 49

[WZ2581] Plant Biotechnology | Pflanzenbiotechnologie 50 - 51[WZ2480] Plant Developmental Genetics 2 | Plant Developmental Genetics 2 52 - 53[WZ1185] Plant Epigenetics and Epigenomics | Plant Epigenetics andEpigenomics

54 - 55

[WZ0047] Plant Stress Physiology | Plant Stress Physiology 56 - 57[WZ2400] Practical Course: Computing for Highthroughput Biology |Forschungspraktikum Computeranwendungen für Hochdurchsatz-Biologie

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[WZ1578] Project Management in Molecular Plant Biotechnology | ProjectManagement in Molecular Plant Biotechnology

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Q[WZ1584] Quantitative Genetics and Selection | Quantitative Genetics andSelection

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RRequired Courses | Required Courses 6Requirement Proof of Proficiency in German | Nachweis Deutschkenntnisse 93[WZ1674] Research Methods and Economic Research Project | ResearchMethods and Economic Research Project

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[WZ1577] Research Project 'Biotechnology of Horticultural Crops' | ResearchProject 'Biotechnology of Horticultural Crops'

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[WZ1575] Research Project 'Chemical Genetics' | Research Project 'ChemicalGenetics'

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[WZ1718] Research Project 'Horticultural Economics and Management' |Research Project 'Horticultural Economics and Management'

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[WZ2401] Research Project 'Molecular Plant Breeding' | ForschungspraktikumMolekulare Pflanzenzüchtung

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[WZ1576] Research Project 'Plant Growth Regulation' | Research Project'Plant Growth Regulation'

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[WZ1549] Research Project 'Plant Nutrition' | Research Project 'Plant Nutrition' 82 - 83


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[WZ2619] Research Project: in silico Evolutionary Genetics of Plants andPathogens | Forschungspraktikum: in silico Evolutionsgenetik von Pflanzen undPathogenen

10 - 11

S[WZ1921] Strategy, Supply Chain Management, and Sustainability inAgribusiness and Food Industry | Strategy, Supply Chain Management, andSustainability in Agribusiness and Food Industry

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[WZ1567] Sustainability: Paradigms, Indicators, and Measurement Systems |Sustainability: Paradigms, Indicators, and Measurement Systems

87 - 89

T[WZ2763] Transcriptional and Posttranscriptional Regulation in Eukaryotes |Transcriptional and Posttranscriptional Regulation in Eukaryotes

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'[WZ1697] 'Research Project 'Metabolite Analyses in Crops' | 'ResearchProject 'Metabolite Analyses in Crops'

74 - 76


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Module Catalog - TUM School of Life Sciences

Documents

Transcript of Module Catalog - TUM School of Life Sciences