An efficient protocol for genomic DNA extraction from formalin-fixed paraffin-embedded tissues
Immunoreactivity of some epitopes in longtime inappropriately stored paraffin-embedded tissues
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Transcript of Immunoreactivity of some epitopes in longtime inappropriately stored paraffin-embedded tissues
Technical Note
Immunoreactivity of some epitopes inlongtime inappropriately stored paraffin-embedded tissues
M. A. Seidu1,2, A. R. Adams1, R. K. Gyasi2, Y. Tettey2, D. O. Nkansah1,E. K. Wiredu1,2
1School of Allied Health Sciences, University of Ghana, 2Department of Pathology, University of Ghana MedicalSchool, Accra, Ghana
One advantage associated with paraffin-embedded tissues is their availability for further studies andreview. Where block filing facilities are not available, used blocks are often dumped in neglected rooms.This may affect their appropriateness for follow-up studies such as immunohistochemistry. The goal of thisstudy was to perform immunohistochemical procedures on poorly stored paraffin-embedded blocks after asimple cleaning and re-embedding procedure. Thirty paraffin-embedded Onchocerca nodules, poorlystored for over 15 years, were used. The blocks were soaked overnight in tap water, rinsed in distilledwater, air-dried, and re-embedded in fresh paraffin wax. Immunoperoxidase demonstrations of six majorenzymes (LDH, SDHB, PDK2, G6PD, ME1, and A/BHD4) were performed on their sections and examinedby light microscopy. Fifty-one 0.6% Female worm nodules in the amount of 51.6% had detectable SDHB,56.6% had detectable levels of PDK2, 58.6% had A/BHD4, 61.1% had G6PD, 63.3% had detectable levelsof ME1, and 64.5% had detectable levels of LDH. At a 99% confidence level, §30% of the nodules have allsix enzymes detectable by immunohistochemistry and §35% have four detectable enzymes (LDH, PDK, A/BHD, and ME). Poorly stored archival formalin-fixed, paraffin-embedded Onchocerca nodules over aprolonged period still retain enough antigenicity for immunohistochemical demonstration of the enzymesLDH, SDHB, PDK2, G6PD, ME1, and A/BHD4 and perhaps other antigens.
Keywords: Antibodies, Enzymes, Epitopes, Immunoreactivity, Nodules
IntroductionOne of the numerous advantages associated with
paraffin embedding of tissues is their availability for
review of a previous study or an entirely new
investigation based on new and improved techniques.
This may depend on how appropriately the used
paraffin-embedded blocks were stored. In well-
resourced laboratories, funds are available for the
purchase of filing cabinets that provide adequate
conditions for a large variety of follow-up investiga-
tions. There are indications that these filing systems
can maintain the antigenicity of tissues embedded in
paraffin blocks for up to 65 years.1–3 However, what
is considered normal storage conditions may be
relative to specific environments. It is easy to under-
stand that in very high temperature environments,
some waxes may soften as temperatures rise closer to
their melting points. There are reports that exposure
of up to 5-mm cut tissue sections on glass slides to
long periods of high room temperatures and humid
conditions can result in significant protein degrada-
tion and loss of immunoreactivity.4–7 This suggests
that adverse conditions could affect the immuno-
reactivity of paraffin-embedded tissues. In some
laboratories where block filing facilities are limited,
the used paraffin-embedded tissue blocks are often
stored in neglected rooms exposed to extreme
weather and environmental conditions.
Onchocerca volvulus is a strict human parasite
responsible for the disease called onchocerciasis (river
blindness). When O. volvulus infects its hosts, it is
detected in forms representing two stages of their life
cycle. The larvae (microfilariae) are found mainly
in the dermis of the skin and the adult worms
(macrofilariae) are often found in subcutaneouslyCorrespondence to: MA Seidu, School of Allied Health Sciences,University of Ghana, Accra, Ghana. Email: [email protected]
� National Society for Histotechnology 2013DOI 10.1179/2046023613Y.0000000024 Journal of Histotechnology 2013 VOL. 36 NO. 2 59
placed fibrous nodules. In view of the peculiar habitat
of the O. volvulus adult worms, histology appears to
be the most ideal method for their study including
immunohistochemical procedures.
As a strictly human parasite, the availability of O.
volvulus material is often restricted by ethical concerns.
To overcome the ethical concerns, some researchers
obtain biological information about O. volvulus from
parasites that infect animals.8–10 Animal sources of
parasite material have less stringent ethical concerns
than human sources although ethics are not comple-
tely disregarded. The failure of drugs developed
against those parasites to affect O. volvulus11–17
indicates that there is a need to obtain direct biological
information from O. volvulus itself. However, the
limited availability of O. volvulus material has led to an
over-dependence on cryo-preserved nodules and used
paraffin-processed archival nodules. Based on the
theory that extreme humidity and temperature can
degrade protein in cut sections on glass slides and
antigenicity, it was hypothesized that paraffin-pro-
cessed O. volvulus nodules with cut surfaces, unsealed
and exposed to similar conditions for long periods, will
lose their immunoreactivity
Immunohistochemical detection of lactate dehydro-
genase (LDH), succinate dehydrogenase B (SDHB),
pyruvate dehydrogenase kinase 2 (PDK2), glucose-6-
phosphate dehydrogenase (G6PD), malic enzyme
1 (ME1), and alpha/beta hydrolase 4 (A/BHD4)
was performed on formalin-fixed, paraffin-embedded
archival O. volvulus nodules. These primary antibodies
were part of reagents obtained for a study on the
metabolism of O. volvulus. The nodules had been
stored for up to 15 years under uncontrolled tropical
conditions at a World Health Organization (WHO)
sponsored Onchocerciasis Chemotherapy Research
Centre (OCRC). The immunohistochemical procedure
was carried out after a simple cleaning and re-
embedding of the moldy paraffin-embedded nodules
without the use of detergents or chemicals.
Materials and MethodsTest materialsParaffin-embedded O. volvulus nodules which had
been inappropriately stored were obtained from the
storeroom of a National/WHO co-sponsored OCRC
in Hohoe Hospital of the Volta Region of Ghana.
The nodules were collected by OCRC in early 1995 as
part of an untreated control group for baseline results
in a study of the chemotherapy of onchocerciasis.18
All the nodules had been fixed in 10% phosphate-
buffered formalin, dehydrated through ascending
grades of ethanol to absolute ethanol, and cleared
in xylene before they were embedded in the paraffin
wax. Cut sections were placed in an open cardboard
box in a neglected room at room temperatures
between 20 and 40uC (average yearly extremes of
temperatures as noted by metrological services of
Ghana for the Volta Region) until they were retrieved
in March 2010 (Fig. 1A).
Treatment of retrieved paraffin-embedded nodule
blocks
The moldy and dusty paraffin-embedded nodules
were soaked in tap water overnight, washed thor-
oughly in five changes of tap water, and rinsed with
distilled water. They were air-dried in the laboratory
and transferred into embedding molds on a hot plate
at 62uC to melt the wax and liberate the nodules. The
liberated nodules were transferred into new cassettes
labeled KP1–KP30 and their lids closed, after which
they were transferred into fresh molten paraffin wax
for 2 hours (Leica histowax, mp 57–58uC; Leica
Microsystems GmbH, Wetzlar, Germany). They were
transferred into two further changes of fresh molten
paraffin wax for 2 hours each to ensure complete
infiltration, after which they were re-embedded in
fresh paraffin wax (Fig. 1B). Four micrometer thick
sections were cut with a rotary microtome (Leica RM
2125 RT; Leica Microsystems GmbH) and stained
with hematoxylin and eosin. The stained sections
were examined by light microscopy to rule out
extensive necrosis of nodular tissues.
Six other sections of 4 mm thickness each were cut
from each nodule and mounted on albumin-coated
slides and another six were cut at random as negative
controls. The test samples were put into six groups,
where each group containing one section from each
nodule was labeled for each of the six enzymes (LDH,
SDH, PDK2, G6PD, ME, and A/BHD4). The six
negative control sections were labeled as negative
controls for each enzyme group. All the sections were
dried in a hot air oven at 50uC overnight before
immunohistochemistry was conducted.
Primary antibodies
Primary antibodies included mouse anti-lactate
dehydrogenase (Sigma L7016), rabbit anti-pyruvate
dehydrogenase kinase 2 (Sigma HPA008287), rabbit
anti-malic enzyme 1 (Sigma HPA006493), rabbit anti-
succinate dehydrogenase B (Sigma HPA2868), rab-
bit anti-glucose-6-phosphate dehydrogenase (Sigma
A9521), and rabbit anti-alpha/beta hydrolase 4
(Sigma HPA000600).
Buffers and solutions
The pH values for the citrate buffer and Tris-buffered
saline (TBS) were 6.0 (Sigma C2488) and 7.4. Working
Seidu et al. Immunoreactivity of some epitopes in longtime inappropriately stored paraffin embedded tissues
60 Journal of Histotechnology 2013 VOL. 36 NO. 2
solution contained one part Tris-buffered saline 610
concentrate (Sigma T5912) and nine parts distilled
water. Other supplies included a dimethylaminoben-
zidine tetrahydrochloride solution (Sigma D3939),
streptavidin–horseradish peroxidase polymer (Sigma
S2438), and a peroxidase-block solution (0.03% H2O2
in 95% methanol, i.e. 1 liter contains 3 ml of 30% H2O2
(Sigma 95321) and 997 ml of 95% methanol).
All Sigma products were obtained from Sigma-
Aldrich Chemie GmbH, Taufkirchen, Germany.
MethodThe antibodies were diluted as listed in Table 1, and a
minimum of 200 ml was dispensed per section to ensure
that sections were well covered. A humidified staining
rack was constructed as previously described.19 All the
sections were de-paraffinized in three changes of xylene
for 3 minutes each, followed by three changes in
methanol for another 3 minutes each. The samples
then transferred into a freshly prepared peroxidase
block solution for 5 minutes to block endogenous
peroxidase and then transferred into distilled water.
Antigens were retrieved in citrate buffer (pH 6.0) at
120uC for 5 minutes in a pressure cooker.
Immunohistochemistry procedure
A batch of slides consisting of one slide each from
KP1–KP30 and a negative control was placed on the
Table 1 Preparation of working solutions of antibodies
Table no.of slides
Antibody
Antibodyvol. (ml) TBS vol. (ml)Conc. (mg/ml) Dilution
31 LDH (2.0) 1 : 500 13 650031 ME (0.05) 1 : 75 84 630031 SDH (0.09) 1 : 250 25 625031 PDK (0.03) 1 : 25 250 625021 G6PD (8.6) 1 : 4 1000 4000*31 A/BHD (0.08) 1 : 25 250 625031 STREPT.-HRP (1.0) 1 : 500 13 6500
Note: *G6PD primary antibody could only yield 4000 ml due to low dilution factor.
Figure 1 Photographs of (A) inappropriately stored paraffin-embedded nodules and (B) paraffin wax re-embedded nodules.
Seidu et al. Immunoreactivity of some epitopes in longtime inappropriately stored paraffin embedded tissues
Journal of Histotechnology 2013 VOL. 36 NO. 2 61
humidified staining rack and reagents were applied in
the following sequence: TBS (5 minutes62), primary
antibodies (30 minutes), streptavidin-peroxidase poly-
mer (30 minutes), and freshly prepared working DAB
solution (10 minutes). This procedure was used for all
six batches in which the primary antibodies were
different for each batch; and TBS was maintained for
the negative slides during primary incubation to avoid
drying. The slides were rinsed and flooded with two
changes of TBS for 5 minutes each after each
application, except after DAB when tap water was
used. The sections were stained with Mayer’s hema-
toxylin for 1 minute and blued in tap water for
2 minutes, after which they were dehydrated in
ethanol, cleared in xylene, and mounted in DPX with
appropriate cover slips.
Examination of slides
Sections were examined using an Olympus light
microscope (Olympus CX31, model CX31RBSF).
Negative staining showed no DAB reaction and
scored 0, while positive staining appeared as golden-
brown to dark brown reaction products. The
presence of golden-brown to dark brown DAB
reaction products in worm tissue sections was noted
as a positive reaction and the reaction product
intensities were scored 1z for a mild reaction and
2z for a strong reaction (either score was regarded as
positive in the summary of results). The examination
was carried out jointly by a biomedical scientist and a
pathologist, and both agreed on a score before it was
recorded. Micrographs were captured using an
Olympus digital camera (model DP20–50) mounted
on an Olympus microscope (model BX51TF). The
micrographs were captured on a computer, arranged
using Microsoft Office Power Point, and converted to
a TIFF image (Fig. 2).
ResultsA total of 33 worms were detected in the sections
stained for LDH and SDH, 31 worms detected in
sections stained for PDK and ME, and 30 worms in
sections stained for A/BHD. Only 20 worms were
detected in sections stained for G6PD, due to the
limited antibody solution volume. Two male worms
were detected in the sections stained for G6PD,
LDH, and SDH while only one male worm was
detected in each batch of sections stained for PDK,
Figure 2 Micrographs of immunohistochemical staining reactions G6PD (A/a), LDH (B/b), PDK (C/c), ME (D/d), A/BHD (E/e),
and SDH (F/f) (uppercase letters5positive control; lowercase letters5negative control; all 6200 magnification).
Seidu et al. Immunoreactivity of some epitopes in longtime inappropriately stored paraffin embedded tissues
62 Journal of Histotechnology 2013 VOL. 36 NO. 2
ME, and A/BHD, all of which were negative for all
the enzymes.
The summary of the results and proportional
representations are in Table 2, while the tests of
significance results of the presence of all the enzymes
in O. volvulus nodules are in Table 3.
DiscussionThis study was aimed at determining the usefulness
of long period, inappropriately stored paraffin-
embedded O. volvulus nodules for immunohistochem-
ical studies. A demonstration of utility would enable
the use of archival nodules for immunohistochemical
studies when fresh materials are difficult to obtain
from human sources if successful. Results showed
that under the conditions from which these nodules
were retrieved and following the process of re-
embedding, between 52 and 65% of worms in the
nodules still had demonstrable enzymes. At 99%
confidence level, a significant number of worms
(§30%) in nodules stored under the adverse condi-
tions were predicted to be positive for all the six
enzymes (P value: 0.002, 0.001, 0.001, 0.001, 0.005,
and 0.001). It is also predicted that at the same level
of confidence, §35% of worms in nodules will be
found to have four (LDH, PDK, A/BHD, and ME)
demonstrable enzymes (P value: 0.002, 0.006, 0.003,
and 0.007). These results are irrespective of any other
factors that could have contributed to loss of
immunoreactivity other than poor storage. It was
not possible to perform immunohistochemistry on
these nodules 15 years ago, which would have
provided initial results for comparison. However,
after such a long period of inappropriate storage,
there is an appreciable level of maintenance of
immunoreactivity of these epitopes as shown by the
results.
In this study, it is not clear whether inappropriate
storage of tissue blocks under humid and wide range
of temperature conditions for long periods did induce
loss of antigenicity and immunoreactivity. However,
it is clear that there is a significant level of detectable
enzymes in inappropriately stored paraffin-embedded
nodules to merit their use for immunohistochemical
investigations.
Paraffin embedding of formalin-fixed nodules is a
remarkably resilient method of specimen and antigen
preservation, and therefore, can withstand the adverse
effect of extended periods of wide range of room
temperatures (20–40uC) and humid conditions without
significant protein degradation or loss of antigenicity,
hence the successful demonstration of these enzymes in
significant proportions.
ConclusionPoorly stored archival formalin-fixed, paraffin-
embedded Onchocerca nodules over a prolonged
period still retain enough antigenicity for immuno-
histochemical demonstration of the enzymes LDH,
SDHB, PDK2, G6PD, ME1, and A/BHD4 and
perhaps other antigens.
AcknowledgementsThe reagents were purchased through the collabora-
tive funding of the Department of Pathology of the
University of Ghana Medical School and University
of Ghana School of Allied Health Sciences through
their local research funds; the authors thank the
Table 3 Tests of proportional significance of enzymes in O. volvulus (30, 35, and 40%) at 95% significance level
No. of female worms No. with Enzyme present % of female with enzyme 0.30 0.35 0.40
G-6-PD 18 11 61.1 0.002** 0.010* 0.035*LDH 31 20 64.5 0.001** 0.002** 0.022*PDK 30 17 56.6 0.001** 0.006** 0.029*A/BHD 29 17 58.6 0.001** 0.003** 0.018*SDH 31 16 51.6 0.005** 0.031* 0.106ME 30 19 63.3 0.001** 0.007** 0.005**
Note: *Significant at 5%; **Significant at 1%.
Table 2 Summary of results
G6PD LDH PDK ME1 A/BHD4 SDHB
Total no. of worms 20* 33 31 31 30 33No. of male worms 2 2 1 1 1 2No. of female worms 18 31 30 30 29 31Enzyme-positive female worms 11 20 17 19 17 16Enzyme-positive male worms 0 0 0 0 0 0% of female worms with enzyme 61.1 64.5 56.6 63.3 58.6 51.6
Note: *G6PD primary antibody could only cover 21 slides due to low dilution factor.
Seidu et al. Immunoreactivity of some epitopes in longtime inappropriately stored paraffin embedded tissues
Journal of Histotechnology 2013 VOL. 36 NO. 2 63
heads of these institutions for their support. The
authors also grateful to the late Dr. K. Awadzi, the
former director of Onchocerciasis Chemotherapy
Research Centre at Hohoe hospital in Ghana and
his staff for the Onchocerca volvulus nodules. Finally,
the authors thank Mr. D. Nana Adjei of the
University of Ghana School of Allied Health
Sciences for his assistance in the statistical analysis.
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