Serological Parameters of Bartonella spp. Infection - DiVA portal
Bartonella-like bacteria carried by domestic mite species
-
Upload
independent -
Category
Documents
-
view
0 -
download
0
Transcript of Bartonella-like bacteria carried by domestic mite species
Bartonella-like bacteria carried by domestic mite species
Jan Kopecky • Marta Nesvorna • Jan Hubert
Received: 3 December 2013 / Accepted: 27 March 2014 / Published online: 8 April 2014� Springer International Publishing Switzerland 2014
Abstract Bacteria of the genus Bartonella are carried by haematophagous mites, ticks,
fleas and flies, and attack the erythrocytes of mammals. Here we describe a Bartonella-like
clade, a distinct group related to Bartonellaceae, in stored-product mites (Acari: Astigmata)
and a predatory mite Cheyletus eruditus (Acari: Prostigmata) based on the analysis of
cloned 16S rRNA gene sequences. By using the clade-specific primers, closely related
Bartonella-like 16S rRNA sequences were amplified from both laboratory colonies and
field strains of three synanthropic mite species (Acarus siro, Lepidoglyphus destructor and
Tyrophagus putrescentiae) and a predatory mite. Altogether, sequences of Bartonella-like
bacteria were found in 11 strains, but were not detected in Dermatophagoides farinae and
D. pteronyssinus and two strains of L. destructor. All obtained sequences formed a separate
cluster branching as a sister group to Bartonellaceae and related to other separate clusters
comprising uncultured bacterial clones from human skin and hemipteran insects (Nysius
plebeius and Nysius sp.). The classification of sequences into operational taxonomic units
(OTUs) showed a difference between A. siro and T. putrescentiae suggesting that the
Bartonella-like bacteria are different in these two mite species. However, species specific
sequences in separate OTUs were observed also for C. eruditus. Possible symbiotic
interactions between Bartonella-like bacteria and their mite hosts are discussed.
Keywords Bartonella � Cheyletus � Acarus � Dermatophagoides � Lepidoglyphus �Tyrophagus � Symbionts � 16S rRNA
Introduction
Bartonella is a gram-negative bacterial genus of the order Rhizobiales (Alphaproteobac-
teria). Its members are small (0.3–1 lm) coccobacilli of hemotropic lifestyle, characterized
J. Kopecky � M. Nesvorna � J. Hubert (&)Crop Research Institute, Drnovska 507, 161 06 Praha 6-Ruzyne, Czech Republice-mail: [email protected]
123
Exp Appl Acarol (2014) 64:21–32DOI 10.1007/s10493-014-9811-1
by long-lasting intra-erythrocyte infection in mammalian hosts. Bartonella spp. are
transmitted by blood sucking arthropods (Kosoy et al. 2012) and also by animal scratches
and bites (Maguina et al. 2009). The best known vector of Bartonella species associated
with humans and ‘‘large mammals’’ are sand flies (Lutzomyia verrucarum) and other biting
flies, human lice (Pediculus humanus humanus), fleas (Ctenocephalides felis, Pulex irri-
tans), and ticks (Ixodes spp., Dermacentor spp., Rhipicephalus sanguineus, Haemaphysalis
spp.) (Tsai et al. 2011). Dermanyssus spp. mites were suggested as the vector of Bartonella
quintana causing trench fever in one case study (Melter et al. 2012). Other Bartonella
species, e.g. B. doshiae, B. tamiae and unidentified Bartonella spp. are associated to bats
and small rodents or insectivores (Tsai et al. 2011). Their vectors are mesostigmatid
(Steatonyssus spp., Ornithonyssus bacoti) and chigger mites (Leptotrombidium spp.,
Schoengastia spp., Blankarrtia spp.) (Reeves et al. 2006, 2007; Kabeya et al. 2010).
Billeter et al. (2008) reviewed arthropod transmitters of Bartonella and suggested a
group of ‘‘miscellaneous arthropods as potential or suspected vectors’’. The group included
house dust mites (Valerio et al. 2005) and honey bees (Apis mellifera capensis) (Jeyap-
rakash et al. 2003). 16S rRNA sequences of Bartonella have been described in the house
dust mites (Dermatophagoides farinae and D. pteronyssinus) used for immunomodulation
and the authors suggested such bacteria as dominant symbionts (Valerio et al. 2005). Our
recent analysis of bacterial 16S rRNA sequences cloned from mites (Acarus siro, D.
farinae, Lepidoglyphus destructor and Tyrophagus putrescentiae) confirmed the presence
of Bartonella-like bacteria in A. siro and T. putrescentiae, but not in D. farinae and L.
destructor (Hubert et al. 2012a). The cloned ‘‘Bartonella-like’’ 16S rRNA sequences were
related to Bartonellaceae, but formed a separate cluster close to sequences of symbiotic
bacteria in ants of the genus Tetraponera (Stoll et al. 2007).
Therefore, specific primers for 16S rRNA gene amplification from Bartonella-like
bacteria were designed to assess its spread among the Astigmata and their predators
Cheyletus eruditus (Prostigmata). Here we document the presence of Bartonella-like
bacteria in laboratory and wild populations of synanthropic (mostly domestic) mite species.
Materials and methods
Mites
The mite species included in the study were stored-product, house dust, and predatory
mites frequently occurring in human made habitats such as house dust and grain stores
(Table 1). The astigmatid mites were mass-reared in IWAKI tissue culture flasks with filter
cap plugs (P-Lab, Praha, Czech Republic). Different rearing diets were used. The stored-
product mite rearing diet (SPMd) was a mixture of oat flakes, wheat germ and Pangamin—
dried yeast extract (Rapeto, Bezdruzice, Czech Republic) (10:10:1 w/w). The house dust
mite rearing diet (HDMd) was composed of dog food, wheat germ, Aqua-tropic—dried fish
food, pangamin and gelatin (10:10:3:2:1 w/w). Both diets were ground up, sieved, and
heated to 70 �C for 30 min. The dog food was Friskies Junior dog food (Nestle-Purina, St.
Louis, MO, USA) The commercial diets were provided by Koppert (http://www.koppert.
com/) and differed in their composition among mite species. Approximately 50 mg of a
rearing diet was placed into each IWAKI chamber. The chambers were placed into Secodar
desiccators (P-Lab, Prague, Czech Republic) with saturated solution of KCl (85 % r.h.) or
NaCl (75 % r. h.) (Table 1) and kept at 25 ± 2 �C in darkness. From each culture, 50 mg
of mites were transferred to Eppendorf tubes using brush from the surface of the chamber
22 Exp Appl Acarol (2014) 64:21–32
123
or plug to avoid contamination by the rest of rearing diet. The samples were surface
sterilized (Hubert et al. 2012a) and homogenized.
The predatory mite C. eruditus was mass cultured in paper bags (7 9 10 cm) filled with
lettuce seeds according to the standardized protocol for CHEYLETINTM production
(Zdarkova 1986). Briefly, 10 specimens of predators and 1,000 individuals of A. siro were
added, resulting in an initial predator:prey ratio of 1/100. The rearing conditions were
75 % RH and 25 ± 2 �C in the dark. After 21 days, the seeds were sieved on an AS 240
Retsch digit sieve machine and predators were separated by a brush under dissection
microscope and transferred into 80 % ethanol. The field strains originated from the grain
debris samples incubated in controlled conditions the same way as previous strain. After
21–42 days the sample was extracted in Tullgren–Berlese funnels using bakers on ice. The
extraction time was 4–6 h. Cheyletus mites were immediately transferred with needles into
80 % ethanol using dissection microscope. From each sample, a microscopic slide was
Table 1 Samples of mite species and strains their origin, rearing conditions and number of obtainedsequences
Species Type Origin Rearing conditions No. ofsequences
Site and collector Samplingdate
Diet r.h.(%)
Acarus siro (L.) Lab. Grain, Bustehrad, CZ (EZdarkova col. 1996)
09/2010 SPMd 85 56
Field Rape seed debris, Zvoleneves, CZ(M. Nesvorna col. 2011)
10/2011 SPMd 85 33
Cheyletus eruditus(Schrank)
Lab. CHEYLETINTM strain 09/2011 A. siro 75 15
Field Grain debris, Nove Straseci, CZ(P. Horak col. 2011)
9/2011 A. siro 75 10
Field Grain debris, Rakovnik, CZ(P. Horak col. 2011)
9/2011 A. siro 75 14
Filed Grain debris, Slany, CZ (P. Horakcol. 2011)
9/2011 A. siro 75 13
Tyrophagusputrescentiae(Schrank)
Lab. Grain, Bustehrad, CZ (E.Zdarkova, col. 1996)
06/2010 SPMd 85 34
Com. Commercial strain Koppert 4/2013 Com.d. 85 33
Field Dog feed (J. Hubert col. 2007) 10/2011 Dogfeed
85 28
Lepidoglyphusdestructor(Schrank)
Lab. Food processing factory CZ(E. Zdarkova col. 1965)
06/2010 HDMd 85 11
Field Grain, Tuchomerice (col.R. Aulicky, 2011)
4/2013 HDMd 85 ND.
Com. Commercial strain Koppert 4/2013 Com.d. 85 ND.
Dermatophagoidesfarinae (Hughes)
Lab. Obtained from MedicalUniversity of Silesia, Poland(K. Solarz 2005)
06/2010 HDMd 75 ND.
Com. Commercial strain Alergeny 4/2013 HDMd 75 ND.
Dermatophagoidespteronyssinus(Trouessart)
Lab. Obtained from MedicalUniversity of Silesia, Poland(K. Solarz 2005)
06/2010 HDMd 75 ND.
Com. Commercial strain Alergeny 4/2013 HDMd 75 ND.
Com. D. commercial diet, HDMd house dust mite diet, SPMd stored product mite diet, ND not determined
Exp Appl Acarol (2014) 64:21–32 23
123
prepared for Cheyletus determination. The samples contained from 10 to 50 predatory
mites and were stored in 80 % ethanol.
Sample extraction
Before the DNA extraction, ethanol was replaced by PBST (phosphate buffered saline with
the detergent Tween� 20). PBST contained 3.2 mM Na2HPO4, 0.5 mM KH2PO4, 1.3 mM
KCl, 135 mM NaCl, 0.05 % Tween� 20. The sample was cleaned three times with PBST
using centrifugation to pellet the mites. The sample of a total volume 100 lL was
homogenized in Radnoti tissue grinder (cat No. 440613, Monrovia, Ca, USA). Total DNA
was extracted using Wizard� Genomic DNA Purification kit (Promega, Madison WI,
USA) according to manufacture’s instructions. The extracted DNA was stored in freezer at
-20 �C before the analyses.
PCR screening for Bartonella-like bacteria
Based on the alignment of Bartonella-like 16S rRNA gene sequences initially found in A.
siro and T. putrescentiae (Hubert et al. 2012a), the specific primers were designed
(Table 2). To exclude inhibition of PCR in extracted DNA, amplification of 16S rRNA
gene was performed with universal bacterial primers (UF: 50-GA-GTT-TGA-TYM-TGG-
C-30, position 8–23, and UR: 50-GYT-ACC-TTG-TTA-CGA-CTT-30, position
1,492–1,509) for all isolated DNA samples. Amplification was done on a C1000 Thermal
Cycler (Bio-Rad, Hercules, CA, USA). A total volume of 25 lL PCR reaction mixture
contained 200 lM dNTPs, 1.5 mM MgCl2; forward and reverse primers (100 nM each),
1.25 unit Taq polymerase (Top-Bio, Prague, Czech Republic) and from 50 to 300 ng
template DNA (including mite genomic DNA).
The resulting PCR products were purified with Wizard� SV Gel and PCR product
clean-up system Kit (Promega) and cloned using pGEM�-T Easy Vector system (Pro-
mega). Selected clones were sequenced by Macrogen (Seoul, Korea). Sequences were
assembled with CodonCode Aligner, version 1.5.2 (CodonCode Corporation, Dedham,
MA, USA) and assigned the bacterial taxonomy using the Ribosomal database project
naıve Bayesian rRNA classifier (Wang et al. 2007).
Table 2 Design of specific primers for Bartonella-like symbionts detection
Primer Sequence 50–30 Position(E. coli)
Tm(�C)
Specificity
Bart_1F TTTTAGGGTGAGCGGCA 82 62.3 Genus Bartonella
Bart_1R GCAGCACCTGTCTCCGAC 1,036 63.2 Bartonella-like clones only
Bart_2R TGTCTCCGACCCAGCCT 1,030 62.9 Genus Bartonella ? unspec.within order
Bart_3R TGCGCCACTGATAGGTAGAC 839 63.2 Bartonella-like clones only
r1492 TACGGYTACCTTGTTACGACTT 1,492 61.6 Bacteria
For PCR detection the following combinations were tested: (i) Bart 1F 9 Bart 1R; (ii) Bart 1F 9 Bart 2R;(iii) Bart 1F 9 R1492; (iv) Bart 1F 9 Bart 3R
24 Exp Appl Acarol (2014) 64:21–32
123
Bioinformatics and phylogenetical analysis
We constructed a library of the 16S rRNA gene fragments. In the first step we obtained 247
sequences and defined operational taxonomic units (OTU0.995) at distance level 0.005 using
Mothur v. 1.32.0 software (Schloss et al. 2009). For the OTU comparison, we used 693 bp
fragments, i.e. all sequences were truncated according to the shortest amplicon yielded by
primers Bart_1F/Bart_3R (positions 108–839 according to Escherichia coli). In the second
step we selected only the sequences obtained with primers Bart_1F/r1492 (positions
108–1,491 in E. coli) from T. putrescentiae and A. siro and completed the set with the full-
length Bartonella-like sequences available in GenBank from previous studies (Hubert et al.
2012a, b). The set comprising 166 sequences of 1,256–1,259 bp was subjected to OTU and
phylogenetic analyses.
Alignments of partial 16S rRNA gene sequences were performed using SILVA Incre-
mental Aligner v.1.2.11 (Pruesse et al. 2012). For analysis of phylogenetic relationships,
the best-fit model of nucleotide substitution was selected using jModelTest 2 software
(Darriba et al. 2012; Guindon and Gascuel 2003). Based on the selection, model GTR with
gamma distribution in four rate categories (?G) was employed to infer phylogeny by
Bayesian analysis using PhyloBayes-MPI, v.1.4e (Lartillot et al. 2009), and maximum-
likelihood analysis in PhyML v.3.0 (Guindon et al. 2010).
Microanatomical analyses of the gut of astigmatid mites
About 50 specimens of A. siro, L. destructor and T. putrescentiae were fixed in modified in
modified Bouin-Dubosque-Brazil fixation, transfer to paraffin, sectioned to 4–6 lm sec-
tions and the sections are stained by Masson‘s triple stain (Smrz 1989). For transmission
microscopy we used protocol described previously (Sobotnik et al. 2008). Briefly, the
mites were fixed in a mixture of 2 % glutaraldehyde and 2.5 % formaldehyde (Poly-
sciences, EM Grade) in 0.1 M phosphate buffer (pH 7.2) at laboratory temperature for
1 day. The mites were washed in 0.1 M PBS and postfixed in 2 % osmium tetroxide in
PBS for 2 h. Subsequent washing in distilled water and dehydration in 50 %, 75 % and
ethanol was followed by embedding into Spurr resin. Ultrathin sections were prepared on
Reichert Ultracut ultramicrotome. Ultrathin sections were stained with uranyl acetate and
lead citrate (standard recipe) and studied using Jeol 1010 and Jeol 1011 transmission
electron microscopes.
Results
The fragments of 16S rRNA sequences of high similarity to Bartonella were detected in
both field and laboratory strains of A. siro, T. putrescetiae and C. eruditus and a laboratory
strain of L. destructor. No positive match was found for commercial and field strains of
L. destructor and house dust mites (Table 1). In all samples of extracted DNA, the
amplification of 16S RNA gene fragment by universal bacterial primers was performed to
exclude adverse effect of PCR inhibitors. Altogether, 247 partial 16S rRNA gene
sequences (693–1,259 bp long) were retrieved including 177 unique sequences deposited
in GenBank under Acc. Nos. KJ635029–KJ635205.
Phylogenetic analysis of the cloned fragments was performed with a set of reference
sequences comprising 92 type strains of the related Rhizobiales families Bartonellaceae,
Exp Appl Acarol (2014) 64:21–32 25
123
Brucellaceae and Rhizobiaceae retrieved from the RDP project (Cole et al. 2009) and 234
closely matching uncultured clone sequences available from GenBank database (Fig. 1).
The analyzed Bartonella-like clone sequences were classified into 16 OTUs0.995
(Table 3). The most of OTUs0.995 were identified as unique, i.e. OTUs0.995 No. 4–16. The
most frequent OTU0.995 No. 1 was shared by all species and the next one No. 2 by A. siro,
T. putrescentiae and C. eruditus. In laboratory and field strains of A. siro, the OTU No. 1
sequences were prevailing, these sequences were also abundant in predatory mite C. er-
uditus and L. destructor. Differently, in all strains of T. putrescentiae the sequences of
OTU No. 2 prevailed, which were also present in the field strains of C. eruditus.
To confirm the differences of Bartonella-like sequences between A. siro and T.
putrescentiae we analyzed 166 sequence of 1,256–1,259 bp length. The analyzed
sequences formed 6 OTUs0.995, and the libraries from A. siro and T. putrescentiae were
formed from two different OTUs0.995 (Nos. 1 and 2) (Fig. 2). The libshuff analysis with
Cramer–von Mises test indicated significant differences between sequences in libraries
from A. siro and T. putrescentiae (dCXYScore = 0.000031; P = 0.0028) and sequences
from T. putrescentiae and A. siro (dCXYScore = 0.000017; P = 0.048).
The gut morphology of L. destructor and T. putrecentiae is similar to the situation
described in A. siro (Sobotnık et al. 2008). The midgut consists of ventriculus, paired caeca
are open laterally to the ventriculus (Fig. 3). The ventriculus continues to the colon and the
midgut followed as intercolon and postcolon. The differences between intercolon and
postcolon are hardly recognizable in paraffin sections. Postcolonal diverticula of A. siro
contained dark stained matter and microvilli (Fig. 3b). L. destructor and T. putrescentiae
had structure similar to postcolonal diverticula A. siro (Fig. 3c, d), but in the observed
sections they look empty.
The postcolonal diverticula of A. siro are inhabited by filamentous bacteria (Sobotnik
et al. 2008) (Fig. 4a). The bacteria are 3.6–4.8 lm long and 0.25–0.32 lm wide (Fig. 4b).
They were detected in every specimen. The bacteria were observed in ventriculus and
caeca of T. putrescentiae outside in food bolus (Fig. 4d, e). Their size 3–3.4 lm long and
0.2–0.24 lm wide was similar to those in A. siro. Such filamentous bacteria were not
observed in L. destructor. In L. destructor, coccoid bacteria were ingested and passed
through the gut in food boli. These bacteria showed hallo rings around the bacterial cells
indicating the exo-enzymatic activity (Fig. 4c).
Discussion
The Bartonella-like clones formed a distinct cluster related to Bartonellaceae and to other
separate clusters of uncultured bacterial clones from human skin (Grice et al. 2009; Kong
et al. 2012), midgut of Nysius plebeius and midgut and whole body of Nysius spp.
(Hemiptera: Lygaeidae) (Matsuura et al. 2012; Table 3). Another related uncultured cluster
was formed by symbionts of bees Apis andreniformis, Apis dorsata, A. mellifera capensis,
and bumble bees Bombus sonorous (Jeyaprakash et al. 2003; Martinson et al. 2011).
Martinson et al. (2011) suggested that A. mellifera gut hosted a bacterium related to the
genus Bartonella, with high similarity to symbiotic bacteria of ants (Russell et al. 2009).
Previously, we localized an abundant population of ‘‘symbiotic’’ bacteria in postcolonal
diverticula of A. siro in ultrastructure sections (Sobotnik et al. 2008). The open questions
are the postcolonal diverticula of T. putrescentiae and L. destructor. According to our
observation they were empty. However, T. putrescentiae has the bacterial community was
well developed in the mesodeum, inside of food bolus. No bacteria of similar size and
26 Exp Appl Acarol (2014) 64:21–32
123
shape were found in L. destructor. Without fluorescent in situ hybridization with specific
probe we are not able to confirm if the observed bacteria belong to Bartonella-like cluster.
The indirect indices are following: similar shape and size for the both species, where the
Sinorhizobium/Ensifer group
Brucellaceae
41 clones Apis andreniformis, Bombus sonorus, 23 cl. Apis dorsata (Martinson et al. 2011),2 cl. Apis mellifera capensis (Jeyaprakash et al. 2003)
Bartonella
JQ726809
JQ726808
JQ726804
JQ726800
JQ726793
JQ726787
GU272277
6 cl. Nysius sp. (Matsuura et al. 2012), 1 cl. rape phyllosphere
JF233144
JF233165
JF233103
JF221476
4 cl. human skin (Kong et al. 2012)
157 cl. human skin (Grice et al. 2009,Kong et al. 2012)
62 cl. Tyr-put, 1 cl. Aca-sir
4 cl. Tyr-put,97 cl. Aca-sir
0.02
51/88
71/83
100/80
100/96
100/100
100/100
100/100
100/92
100/87
100/-
100/98
96/69
100/89
100/90
Fig. 1 Phylogenetic relatedness of Bartonella-like bacteria in mites to the closest taxa and unculturedbacteria cloned from other habitats. A Bayesian phylogram calculated using GTR ?G nucleotidesubstitution model for alignment of 166 cloned Bartonella-like 16S rRNA sequences with those of 92 type-species of the closest taxa within Rhizobiales and 234 matching uncultured bacterial sequences retrievedfrom the GenBank database. The branch labels indicate Bayesian posterior probability and bootstrapconfidence value calculated from 1000 replicates in maximum-likelihood analysis. Branch lengthscorrespond to the mean posterior estimates of evolutionary distances (scale bar 0.02)
Exp Appl Acarol (2014) 64:21–32 27
123
Table 3 The distribution of Bartonella-like sequences in 247 sequences contain library from the observedmites, the sequences are classified to OTU0.995
OTU Species of mites
No. N A. siro T. putrescentiae L. destructor C. eruditus
Lab. Field Lab. Com. Field Lab. Lab. Field1NS Field2R Field3S
1 124 53 32 3 10 5 10 6 5
2 108 1 29 33 28 7 6 4
3 2 2
4 1 1
5 1 1
6 1 1
7 1 1
8 1 1
9 1 1
10 1 1
11 1 1
12 1 1
13 1 1
14 1 1
15 1 1
16 1 1
No.OTU
247 56 33 34 33 28 11 15 10 14 13
TypeOTU
16 4 2 4 1 1 2 5 1 4 5
Field1NS site Nove Straseci, Field2R site Rakovnik, Field3S site Slany
1 2 3 4OTU 5 6
A B
Fig. 2 The difference in Bartonella-like sequence libraries from Acarus siro (a) and Tyrophagusputrescentiae (b) based on operational taxonomic units (OTUs0.995). For the analysis, 166 sequences of1,256–1,259 bp length were used
28 Exp Appl Acarol (2014) 64:21–32
123
Bartonella-like bacteria were frequently detected in 16 S rRNA gene libraries and using
specific primers. The low number of identified sequences in L. destructor and their high
similarity to those obtained from A. siro may be explained by contaminations. The bacteria
were present only in laboratory strain, not in the field and commercial strain. We can not
exclude some contamination of the cultures by feces etc. If the bacteria are present in
digestive tract, they can be expected in the feces. The fact that we surface-sterilize the
A B
C D
ev
c
pc
c
pc
v
pc
fb
pc
c
Fig. 3 The histological section of the gut of observed astigmatid mites; a Acarus siro, b detail onpostcolonal diverticula of A. siro, c Lepidoglyphus destructor and d Tyrophagus putrescentiae; thepostcolonal diverticula are pointed by arrows. Scales ad—100 lm; bc—50 lm; Legends: e—esophagus,c—colon, fb—food bolus, pc—postcolon, v—ventriculus
Exp Appl Acarol (2014) 64:21–32 29
123
mites, does not prevent amplification of DNA of Bartonella-like bacteria potentially
attached to the surface of sterilized mites.
The genus Bartonella is characterized by highly conservative 16S rRNA gene which
complicates the taxonomical determination based on this feature (Kosoy et al. 2012). Here,
we found significant differences in Bartonella-like sequences between A. siro and T.
putrescentiae (Table 3; Fig. 2). It indicates the presence of specific Bartonella-like taxa in
these two species.
A
B
C
D
E
Fig. 4 The transmission section midgut of astigmatid mite; a Postolonal diverticula of Acarus siro containsbacteria, b detail view on filamentous bacteria in postcolonal diverticula of A. siro; c detail view on ingestedcoccoid bacteria of Lepidoglyphus destructor in the esophagus, arrows point to hallo rings; d total view ofmidgut of Tyrophagus putrescentiae with filamentous bacteria outside the food bolus; e detail of filamentousbacteria in T. putrescentiae. Scales a—5 lm; b—1 lm; c—200 nm; d—3 lm; e—300 nm
30 Exp Appl Acarol (2014) 64:21–32
123
Cheyletus eruditus is a predatory mite feeding on astigmatid mites and insects
(Zdarkova 1998) and the observed Bartonella-like bacteria might originate from the
astigmatid mite prey. It is illustrated by OTU No. 1 which was shared by the prey labo-
ratory strain of A. siro and the predatory mites (Table 3). In our analyses five OTU
categories were unique for C. eruditus and the numbers of sequences were low. The
suggestion is that these sequences might originate from the bacteria of other prey astig-
matid mites. We can not exclude the mistakes during sequencing due tot he low distance
level for OTU.
Bartonella-related bacteria showed symbiotic association with insects, mainly the ants.
It opens a question if the Bartonella-like bacteria are symbiotic in mites, too. The previous
reports discussed the associated bacteria interacting with the astigmatid mites (mainly T.
putrescentiae) and participating in digestive processes (Smrz 2003; Smrz et al. 1991; Smrz
and Trelova 1995; Smrz and Catska 1989, 2010; Hubert et al. 2012b). A further study is
necessary to characterize the interaction between Bartonella-like bacteria and mites.
Acknowledgement The work was supported by Czech Science Foundation, Grant No. GA525/09/1872.The authors are obligated to Jitka Stara for critical comments to manuscript, Zuzana Kucerova for Cheyletusidentification, Vaclav Stejskal and Radek Aulicky for Cheyletus samples.
References
Billeter SA, Levy MG, Chomel BB, Breitschwerdt EB (2008) Vector transmission of Bartonella specieswith emphasis on the potential for tick transmission. Med Vet Entomol 22:1–15
Cole JR, Wang Q, Cardenas E, Fish J, Chai B, Farris RJ, Kulam-Syed-Mohideen AS, McGarrell DM, MarshT, Garrity GM, Tiedje JM (2009) The ribosomal database project: improved alignments and new toolsfor rRNA analysis. Nucl Acids Res 37(Database issue):D141–D145
Darriba D, Taboada GL, Doallo R, Posada D (2012) jModelTest 2: more models, new heuristics and parallelcomputing. Nat Methods 9:772
Grice EA, Kong HH, Conlan S, Deming CB, Davis J, Young AC, NISC Comparative Sequencing Program,Bouffard GG, Blakesley RW, Murray PR, Green ED, Turner ML, Segre JA (2009) Topographical andtemporal diversity of the human skin microbiome. Science 324(5931):1190–1192
Guindon S, Gascuel O (2003) A simple, fast and accurate method to estimate large phylogenies by maxi-mum-likelihood. Syst Biol 52:696–704
Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O (2010) New algorithms andmethods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. SystBiol 59:307–321
Hubert J, Kopecky J, Perotti MA, Nesvorna M, Braig HR, Sagova-Mareckova M, Macovei L, Zurek L(2012a) Detection and identification of species-specific bacteria associated with synanthropic mites.Microb Ecol 63:919–928
Hubert J, Nesvorna M, Sagova-Mareckova M, Kopecky J (2012b) Shift of bacterial community in synan-thropic mite Tyrophagus putrescentiae induced by Fusarium fungal diet. PLoS One 7:e48429
Jeyaprakash A, Hoy MA, Allsopp MH (2003) Bacterial diversity in worker adults of Apis mellifera capensisand Apis mellifera scutellata (Insecta: Hymenoptera) assessed using 16S rRNA sequences. J InvertebrPathol 84:96–103
Kabeya H, Colborn JM, Bai Y, Lerdthusnee K, Richardson JH, Maruyama S, Kosoy MY (2010) Detectionof Bartonella tamiae DNA in ectoparasites from rodents in Thailand and their sequence similarity withbacterial cultures from Thai patients. Vector Borne Zoonotic Dis 10:429–434
Kong HH, Oh J, Deming C, Conlan S, Grice EA, Beatson MA, Nomicos E, Polley EC, Komarow HD, NISCComparative Sequence Program, Murray PR, Turner ML, Segre JA (2012) Temporal shifts in the skinmicrobiome associated with disease flares and treatment in children with atopic dermatitis. GenomeRes 22:850–859
Kosoy M, Hayman DT, Chan KS (2012) Bartonella bacteria in nature: where does population variability endand a species start? Infect Genet Evol 12:894–904
Lartillot N, Lepage T, Blanquart S (2009) PhyloBayes 3: a Bayesian software package for phylogeneticreconstruction and molecular dating. Bioinformatics 25:2286–2288
Exp Appl Acarol (2014) 64:21–32 31
123
Maguina C, Guerra H, Ventosilla P (2009) Bartonellosis. Clin Dermatol 27:271–280Martinson VG, Danforth BN, Minckley RL, Rueppell O, Tingek S, Moran NA (2011) A simple and
distinctive microbiota associated with honey bees and bumble bees. Mol Ecol 20:619–628Matsuura Y, Kikuchi Y, Meng XY, Koga R, Fukatsu T (2012) Novel clade of alphaproteobacterial en-
dosymbionts associated with stinkbugs and other arthropods. Appl Environ Microbiol 78:4149–4156Melter O, Arvand M, Votypka J, Hulınska D (2012) Bartonella quintana transmission from mite to family
with high socioeconomic status. Emerg Infect Dis 18:163–165Pruesse E, Peplies J, Glockner FO (2012) SINA: accurate high-throughput multiple sequence alignment of
ribosomal RNA genes. Bioinformatics 28:1823–1829Reeves WK, Dowling AP, Dasch GA (2006) Rickettsial agents from parasitic Dermanyssoidea (Acari:
Mesostigmata). Exp Appl Acarol 38:181–188Reeves WK, Loftis AD, Szumlas DE, Abbassy MM, Helmy IM, Hanafi HA, Dasch GA (2007) Rickettsial
pathogens in the tropical rat mite Ornithonyssus bacoti (Acari: Macronyssidae) from Egyptian rats(Rattus spp.). Exp Appl Acarol 41:101–107
Russell JA, Moreau CS, Goldman-Huertas B, Fujiwara M, Lohman DJ, Pierce NE (2009) Bacterial gutsymbionts are tightly linked with the evolution of herbivory in ants. Proc Natl Acad Sci USA106:21236–22141
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, ParksDH, Robinson CJ, Sahl JW, Stres B, Thallinger GG, Van Horn DJ, Weber CF (2009) Introducingmothur: open-source, platform-independent, community-supported software for describing and com-paring microbial communities. Appl Environ Microbiol 75:7537–7541
Smrz J (2003) Microanatomical and biological aspects of bacterial association in Tyrophagus putrescentiae(Acari: Acaridida). Exp Appl Acarol 31:105–113
Smrz J (1989) Internal anatomy of Hypochthonius rufulus (Acari: Oribatida). J Morphol 200:215–230Smrz J, Catska V (1989) The effect of the consumption of some soil fungi on the internal microanatomy of
the mite Tyrophagus putrescentiae (Schrank) (Acari: Acaridida). Acta Univ Carol-Biol 33:81–93Smrz J, Catska V (2010) Mycopahgous mites and their internal associated bacteria cooperate to digest chitin
in the soil. Symbiosis 52:33–40Smrz J, Trelova M (1995) The associations of bacteria and some soil mites (Acari: Oribatida and Acaridida).
Acta Zool Fenn 196:120–123Smrz J, Svobodova J, Catska V (1991) Synergetic participation of Tyrophagus putrescentiae (Schrank)
(Acari: Acaridida) and its associated bacteria on the destruction of some soil micromycetes. J ApplEntomol 11:206–210
Sobotnik J, Alberti G, Weyda F, Hubert J (2008) Ultrastructure of the digestive tract in Acarus siro (Acari:Acaridida). J Morphol 269:54–71
Stoll S, Gadau J, Gross J, Feldhaar H (2007) Bacterial microbiota associated with ants of the genusTetraponera. Biol J Linnean Soc 90:399–412
Tsai YL, Chang CC, Chuang ST, Chomel BB (2011) Bartonella species and their ectoparasites: selectivehost adaptation or strain selection between the vector and the mammalian host? Comp ImmunolMicrobiol Infect Dis 34:299–314
Valerio CR, Murray P, Arlian LG, Slater JE (2005) Bacterial 16S ribosomal DNA in house dust mitecultures. J Allergy Clin Immunol 116:1296–1300
Wang Q, Garrity GM, Tiedje JM, Cole JR (2007) Naıve Bayesian classifier for rapid assignment of rRNAsequences into the new bacterial taxonomy. Appl Environ Microbiol 73:5261–5267
Zdarkova E (1986) Mass rearing of the predator Cheyletus eruditus (Schrank) (Acarina: Cheyletidae) forbiological control of acarid mites infesting stored products. Crop Prot Sci 5:122–124
Zdarkova E (1998) Biological control of storage mites by Cheyletus eruditus. Integr Pest Manag Rev3:111–116
32 Exp Appl Acarol (2014) 64:21–32
123