Integrating toxin gene expression, growth and fumonisin B1 and B2 production by a strain of Fusarium...
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ResearchCite this article: Medina A, Schmidt-Heydt
M, Cardenas-Chavez DL, Parra R, Geisen R,
Magan N. 2013 Integrating toxin gene
expression, growth and fumonisin B1 and B2
production by a strain of Fusarium verticillioides
under different environmental factors. J R Soc
Interface 10: 20130320.
http://dx.doi.org/10.1098/rsif.2013.0320
Received: 8 April 2013
Accepted: 30 April 2013
Subject Areas:systems biology, biotechnology,
computational biology
Keywords:fumonisin genes, systems biology, water
activity, temperature, predictive modelling,
ternary relationships
Author for correspondence:Naresh Magan
e-mail: [email protected]
& 2013 The Author(s) Published by the Royal Society. All rights reserved.
Integrating toxin gene expression, growthand fumonisin B1 and B2 production by astrain of Fusarium verticillioides underdifferent environmental factors
Angel Medina1, Markus Schmidt-Heydt2, Diana L. Cardenas-Chavez3,Roberto Parra3, Rolf Geisen2 and Naresh Magan1
1Applied Mycology Group, Cranfield Health, Cranfield University, Bedfordshire, ALCS MK43 0AL, UK,2MaxRubner-Institute, Haid-und-Neu-Str. 9, 76131 Karlsruhe, Germany3Centro del Agua para America Latina y el Caribe (CAALCA), Instituto Tecnologico de Monterrey,Campus Monterrey, NL 64849, Mexico
The objective of this study was to integrate data on the effect of water activity
(aw; 0.995–0.93) and temperature (20–358C) on activation of the biosynthetic
FUM genes, growth and the mycotoxins fumonisin (FB1, FB2) by Fusariumverticillioides in vitro. The relative expression of nine biosynthetic cluster
genes (FUM1, FUM7, FUM10, FUM11, FUM12, FUM13, FUM14, FUM16and FUM19) in relation to the environmental factors was determined using
a microarray analysis. The expression was related to growth and phenotypic
FB1 and FB2 production. These data were used to develop a mixed-growth-
associated product formation model and link this to a linear combination
of the expression data for the nine genes. The model was then validated by
examining datasets outside the model fitting conditions used (358C). The
relationship between the key gene (FUM1) and other genes in the cluster
(FUM11, FUM13, FUM9, FUM14) were examined in relation to aw, tempera-
ture, FB1 and FB2 production by developing ternary diagrams of relative
expression. This model is important in developing an integrated systems
approach to develop prevention strategies to control fumonisin biosynthesis
in staple food commodities and could also be used to predict the potential
impact that climate change factors may have on toxin production.
1. IntroductionFusarium verticillioides (teleomorph, Gibberella moniliformis) is an economically
important maize pathogen which colonizes ripening cobs and contamina-
tes the maize with fumonisins (FB; B1–B4). These toxins are important as
they have toxic effects by inhibition of sphingolipid metabolism which can
impact on human and animal health. For example, fumonisins cause leuko-
encephalomalacia, a brain lesion which can be fatal to horses after consumption
of contaminated animal feed. Fumonisins have also been associated epidemio-
logically with human oesophageal cancer and birth defects, especially neural
tube defects in humans [1]. The genome of F. verticillioides has been elucidated
[2] and the FB biosynthetic genes are clustered together as for other mycotoxi-
genic fungi (e.g. Aspergillus flavus; Fusarium graminearum). This may facilitate
horizontal transfer and co-ordinated transcriptional regulation of the genes in
the FB biosynthetic cluster which consists of 17 transcriptionally co-regulated
genes. Fumonisin polyketide synthase (FUM1) is the important gene of the cluster
of co-regulated fumonisin biosynthetic genes. The cluster also encodes an amino-
transferase (FUM8), a C-3 carbonyl reductase (FUM13), and cytochrome P450
and other enzymes that catalyse oxygenation at C-5 (FUM3), C-10 (FUM2) and at
another undefined site (FUM6) [3]. Four other genes (FUM7, FUM10, FUM11,
FUM14) are also required for tricarballylic acid esterification. At the opposite end
of the cluster from FUM1 there are transporter encoding genes (FUM19, FUM17
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and FUM18). These have been suggested as being involved in
fumonisin self-protection and sphingolipid metabolism.
The biosynthesis of mycotoxins is strongly dependent on
growth conditions such as substrate composition [4] or phys-
ical factors including pH, water availability, temperature or
modified atmospheres [5–8]. Water activity (aw) is a good
measure of the amount of freely available water in a substrate
for microbial growth and is related to pure water, which has a
aw of 1.00 or 100 per cent equilibrium relative humidity. This
aw is related to the total moisture content of a specific sub-
strate by a moisture sorption curve [9]. Thus, depending on
the combination of abiotic factors the biosynthetic pathway
for FBs will be activated or completely inhibited. Marin
et al. [10] showed that the aw � temperature conditions for
germination, growth and phenotypic FB production were
different with much narrower limits of these two interacting
parameters for mycotoxin production. Models of the pro-
duction of FB in relation to interacting abiotic conditions
have been examined [11,12], although such data have not pre-
viously been related to the FB gene cluster expression. Studies
by Jurado et al. [13] showed that expression of the FUM1 gene
was significantly increased under water stress conditions
(0.95 aw) which may indicate an increase in FB production
by F. verticillioides under such conditions. In contrast, studies
with Fusarium proliferatum, which has a much broader host
range than the former species, showed that FUM1 gene
expression was more stable under water stress, suggesting
that FB production may not be an important determinant of
pathogen infection of maize by this species [14].
Previous studies using a mycotoxin microarray with sub-
arrays for specific mycotoxins, developed by Schmidt-Heydt &
Geisen [15] have shown the impact of key environmental
factors (aw, temperature) on important mycotoxin genes of the
aflatoxin gene cluster (A. flavus) and of the trichothecene gene
cluster (F. graminearum, Fusarium culmorum) and phenotypic
mycotoxin production [16]. Recently, Schmidt-Heydt et al. [17]
showed that for F. culmorum and F. graminearum it is possible
to integrate such microarray data on relative TRI gene expression
under different environmental conditions, growth and deoxyni-
valenol (DON) production and develop models which can be
used to predict DON concentrations. In 2012 Abdel-Hadi et al.[18] demonstrated that data on key genes in the biosynthesis of
aflatoxin, including the key regulatory genes (aflR, aflS) could
be integrated with growth and aflatoxin production by using a
mixed-growth model. This also enabled the relatively accurate
prediction of aflatoxin production at increased temperatures
and water stress conditions relevant to climate change type scen-
arios. No such integrated systems approach has been attempted
for such datasets for F. verticillioides.Here, we have used the mycotoxin microarray sub-array
described previously [15] for the FB genes as a tool for examin-
ing the changes that interacting environmental factors may have
on the relative expression of the F. verticillioides gene cluster, as
well as effects on growth and phenotypic fumonisin pro-
duction. The objectives of this study were (i) to examine the
effect of aw � temperature conditions on growth, FB1 and FB2
production and relative expression of nine genes of the FUM
cluster (FUM1, FUM7, FUM10, FUM11, FUM12, FUM13,
FUM14, FUM16 and FUM19) in the fumonisin biosynthetic
pathway using the mycotoxin gene microarray; (ii) to quantify
the amounts of FB1 and FB2 produced under these interacting
conditions; (iii) to evaluate the mixed-growth model appli-
cation to integrate the relationship between the expression of
these genes, environmental factors, growth and FB1 and FB2
production; (iv) to validate the model with datasets outside
the range of the model and (v) to examine the possible ternary
interactions and relationships between FUM1, a key gene, and
some other genes in the biosynthetic pathway in relation to
aw, temperature and fumonisin FB1 and FB2 production.
2. Material and methods2.1. Fungal strain usedThe F. verticillioides strain (MPVP No 294) has been kindly sup-
plied by Prof. P. Battilani, University Sacre Cuore, Piacenza,
Italy and is from the Italian Culture Collection and was stored
at 48C or sub-cultured on a 2 per cent maize meal agar when
required. It has a known fumonisin production capacity [19].
2.2. Growth studiesThese were carried out with a conducive YES medium (20 g yeast
extract, 150 g sucrose, 1 g MgS04. 7H20, 1 l). The agar medium
was modified with glycerol to adjust the water availability to
0.995, 0.98, 0.95, 0.93 aw as described previously [20,21]. The
accuracy of the modifications was confirmed using an Aqualab
3TE instrument (Decagon, Pullman, WA, USA) and found to
be within +0.005 of the target aw.
Petri plates (Ø 9 cm) containing media treatments and over-
laid with sterile 8.5 cm cellophane discs (P400, Cannings Ltd,
Bristol, UK) were inoculated using small agar plugs (Ø 3 mm)
taken from 7–8-day-old growing cultures grown at 258C. Repli-
cates (five per treatment) were incubated at 20, 25 and 308C for
model design and temperature outside the model boundaries:
358C was used to validate the model. Assessment of growth
was made daily during the 10-day incubation period, the optimal
time for FUM1 gene expression [13]. Two diameters of the grow-
ing colonies were measured at right angles to each other until the
whole colony biomass was scraped from the cellophane surface
into Eppendorf tubes and frozen at 2808C for RNA extraction.
2.3. Isolation of RNA from samplesTo perform microarray experiments RNA was isolated using the
RNAeasy Plant Mini kit (Qiagen, Hilden, Germany). The procedure
was made according to the manufacturer’s instructions except for
the ground of 1 g of mycelium with a mortar and pestle in liquid
nitrogen, of which 250 mg of resulting powder was suspended in
750 ml lysis buffer, mixed with 7.5 ml b-mercaptoethanol and 100
glass beads with a diameter of 1 mm (B. Braun Biotech International
GmbH, Melsungen, Germany) in a 2 ml RNase-free micro reaction
tube. These extracts were mixed thoroughly and incubated for
15 min at 558C and 42 kHz in an S10H ultrasonic bath (Elma,
Singen, Germany).
2.4. Microarray experimentscDNA synthesis and labelling were performed using 50 mg of the
DNase I treated total RNA and the Micromax Direct Labeling kit
(Perkin Elmer Life And Analytical Sciences, Inc., Boston, USA).
The cDNA was subsequently purified with the QiaQuick Min
Elute kit (Qiagen, Hilden, Germany), dried in a vacuum con-
centrator (Speed Vac, Savant Instruments, Farmingdale, USA),
re-suspended in 60 ml hybridization buffer (Scienion, Berlin,
Germany), heated for 2 min at 958C, placed on ice to prevent
strand rearrangement and hybridized for 18 h at 428C to the
microarray by using an automatic hybridization station (Perkin
Elmer, Boston, USA). This array was scanned with a confocal
laser system (Scanarray lite, Perkin Elmer) at a resolution of
5 mm. The results were normalized using the Lowess algorithm
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(locally weighted scatter plot smoothing) together with sub-
traction of the background signal. The constitutively expressed
b-tubulin gene was used as a control.
2.5. Fumonisin B1 and B2 analyses2.5.1. Fumonisins extraction and derivatizationFumonisins were extracted from agar plugs cut out with the aid of
a cork borer (Ø ¼ 5 mm) 10-day-old cultures of Fusarium. The
plugs were then placed in pre-weighed 2 ml Eppendorff tubes.
The tubes and their contents were weighed and the mass recorded.
Fumonisins were extracted by adding 1 ml of acetonitrile/water
(50 : 50, v/v) and then shaking the mixture for 60 min [22].
Sample extract (50 ml) was derivatized by mixing with 200 ml
of o-phthaldehyde (OPA) solution. The solution was prepared by
dissolving 40 mg OPA in 1 ml of methanol followed by addi-
tion of 5 ml of 0.1 M sodium tetraborate solution and 50 ml
of 2-mercaptoethanol [22]. The different concentrations of FB1
and FB2 standard (50 mg ml21: Sigma-Aldrich, Chemie GmbH,
Steinheim, Germany) were similarly derivatized prior to injection.
2.5.2. HPLC-FLD detection and quantificationThe derivatized sample (25 ml) was analysed by HPLC (Agilent
1200 series) with a fluorescence detector set at excitation and emis-
sion wavelengths of 355 and 440 nm, respectively. Separation was
achieved using C18 chromatographic analytical column (Phenom-
enex Gemini; 150 � 4.6, 3 mm particle size: Phenomenex, CA,
USA). The mobile phases were (A) methanol/0.05 M sodium di-
hydrogen phosphate aqueous solution adjusted to pH 5.0 with
2 M NaOH (50/50, v/v) and (B) acetonitrile/water (80/20, v/v).
Each mobile phase was filtered by passing through a 0.45 mm
filter and degassed by means of an on-line degassing device
(Agilent). The gradient program was 100 per cent A during
5 min followed by a rapid increase to 50 per cent A þ 50 per cent
B with a final hold of 15 min. The column was kept at 308C with
a flow rate of 1.0 ml min21. Quantification of fumonisins was
achieved through comparison of peak areas of the chromatograms
of the samples with those of the fumonisins standard.
2.6. Data analysis and model developmentThis study has used a mixed-growth-associated product for-
mation model [23], which takes account of both specific growth
rate and metabolite accumulation. This includes the fact that pro-
duct formation is a combination of growth rate and the specific
rate of product formation which is given by equation (2.1). This
has been previously used for production of compounds such
as xanthan gum and for examining A. flavus growth and aflatox-
ins production [18]:
qP ¼ amþ b; ð2:1Þ
where qP is the total production of fumonisin B1 or B2 produced; a
and b are constants of fumonisin production associated with pri-
mary and secondary metabolism and m is the specific growth
rate. The specific rate of product formation is proportional to the
total biomass and the rate of product formation:
qP ¼1
XdPdt: ð2:2Þ
The rate of product formation for a growth-associated product is
related to the initial biomass (Xo) and the specific growth rate (m)
and the time (t). Thus, combining equations (2.1) and (2.2) results in
dPdt¼ ðamþ bÞX ð2:3Þ
and
dPdt¼ X0emt: ð2:4Þ
The rate of microbial growth is characterized by the specific
growth rate, defined as
m ;1
XdXdt
: ð2:5Þ
After integration form from t ¼ 0 to t (days) and X(0) ¼ X0 to
X(t) ¼ X.
X ¼ X0emt X0 ¼ Xe�mt: ð2:6Þ
Substituting equation (2.6) and (2.3) we obtain:
dPdt¼ ðamþ bÞX0emt: ð2:7Þ
A temperature-dependent rate coefficient for growth rep-
resented by Arrhenius’s empirical equation is given by
m ¼ e�Ea=RT ; ð2:8Þ
Ea is the activation energy and R is the universal constant of the
gases (8.31 � 1023 J mol K21) and T is the absolute temperature
(K). If we assume that the rate of production is affected directly
by fungal growth rate and activation energy, we obtain
dPdt¼ ðamþ bÞX0emt � e�Ea=RT : ð2:9Þ
Based on previous experiments (data not shown), it was
observed that the activation energy could be adjusted as a quad-
ratic function:
Ea ¼ b1aw: ð2:10Þ
Thus,
dPdt¼ ðamþ bÞX0emte�b1aw=RT ð2:11Þ
andðP
0
dP ¼ ðamþ bÞX0e�b1aw=RTðt
0
emtdt: ð2:12Þ
After integration:
P ¼ aþ b
m
� �X0e�b1aw=RTðemt � 1Þ: ð2:13Þ
2.7. Generation of ternary contour surfacesof interactions between gene expression,environmental factors and fumonisinsproduction
In order to plot the ternary contour surfaces of the genetic
expression, a standardized signal from the microarray was calcu-
lated as follows for aw and for temperature to relate the relative
abundance of mRNA of the FB cluster genes (e.g. FUM11,
FUM13, FUM19) to the regulatory gene (FUM1):
fðawÞ ¼�
FUM1ðFUM1þ FUM11þ FUM13Þ ;
� FUM11ðFUM1þ FUM11þ FUM13Þ ;
� FUM13ðFUM1þ FUM11þ FUM13Þ
�
fðtemperatureÞ ¼�
FUM1ðFUM1þ FUM11þ FUM13Þ ;
� FUM11ðFUM1þ FUM11þ FUM13Þ ;
� FUM13ðFUM1þ FUM11þ FUM13Þ
�;
0
2
4
6
8
10
12
14
16
0.93 0.95 0.98 0.995
diam
etri
c gr
owth
rat
e (m
m d
–1)
water activity
20 25 30 35
Figure 1. Effect of temperature and water activity on the growth rate of astrain of F. verticillioides. Means of five replicates per treatment.
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where the standardized value ¼ actual value2minimum value/
maximum value2minimum value. For FB1 and FB2 production
the following equation was used:
f ðfumonisinB1 orB2 ðppmÞÞ¼�
FUM1ðFUM1þFUM11þFUM13Þ ;
� FUM11ðFUM1þFUM11þFUM13Þ ;
� FUM13ðFUM1þFUM11þFUM13Þ
�:
3. Results3.1. Effect of environmental factors on growth and
fumonisin B1 and B2 production by the strain ofF. verticillioides
Figure 1 shows the effect of interacting conditions of aw
and temperature on growth of the F. verticillioides strain
used in this study. This shows that optimum was at
0.995 aw and 20–258C but this changed to 0.98 aw at
30–358C. At 0.93 aw there was some growth but only
at 25–308C and this was less than 20 per cent of that under
optimum conditions.
Figure 2 shows the impact of aw � temperature effects on
the relative expression of the nine genes used in this study.
This shows that under some conditions there was an
increased expression of certain genes indicative of the effect
of drought�temperature stress.
Figures 3 and 4 show the effects of (i) aw and (ii) tempera-
ture on the production of FB1 and FB2, respectively.
The optimal temperature and aw for FB1 production were at
208C and 0.98–0.995, respectively, in contrast to that for
growth (308C and 0.98 aw). For FB2 production the optimum
aw was 0.98, while the optimum temperature for pro-
duction was broader than that for growth (20–308C). This
suggests marked differences in the growth optimum and
in the range of aw � temperature conditions when compared
with that for FB1 and FB2 production by F. verticillioides.
These data were used in conjunction with the relative gene
expression of nine genes involved in the biosynthesis of
fumonisins for modelling their relationship.
3.2. Modelling the relationship betweenenvironmental factors, gene expression andfumonisin B1 and B2 production
For assessing the relationship between physiological and
thermodynamic conditions, FB1 and FB2 production and
the expression of the gene clusters involved in toxin pro-
duction, the physical model previously described in §2.6
was combined with the gene expression data as a linear
combination. The generic cluster was
½g� ¼ a1FUM1þ a2FUM7þ a3FUM10þ a4FUM11þ a5FUM12þ a6FUM13þ a7FUM14þ a8FUM16þ a9FUM19;
ð3:1Þ
where a1 to a9 are the parameter estimates from the linear
combination of the expression of genes so that [g] represents
the sum of the effect of the individual genes expressed
under specific conditions. The final model which considers
aw, temperature, growth rate and gene expression on the
regulation of FB1 and FB2 is given by
P ¼ ½g� � aþ b
m
� �X0e�b1aw=RTðemt � 1Þ; ð3:2Þ
where P is the FB1 or FB2 production (ppm) and b1, b2, a and
b are parameter estimates from the model and m was calcu-
lated based on a period of 10 days growth and the
assumption that growth occurs in cylindrical fungal hyphal
extension with a constant radius simplified as
mt ¼ lnXf
Xi¼ ln
mf � r
mi � r
� �¼ ln
mf � vf=mf
mi � vi=mi
� �
¼ lnp� r2
A � Lf
p� r2A � Li
� �¼ ln
Lf
Li
� �; ð3:3Þ
Xf and Xi are final and initial biomass, mf and mi are
initial and final fungal mass, vf and vi are the initial
and final fungal road volume, r is the fungal density, rA is
the F. verticillioides hyphal radius and Lf and Li are the
radial growth.
Table 1 shows the actual mean data (n ¼ 3) for FB1 and
FB2 production and that predicted by this model in relation
to different combinations of temperature and aw and the rela-
tive mean growth rate.
Table 2 shows the ANOVA for the fit of the model and the
regressed coefficients and the corrected totals for FB1 and
FB2. This suggests that the model showed a good fit to the
data and was statistically significant. Table 3 shows the over-
all estimates and the dependence for the main areas that are
related to the model. All the parameters are statistically sig-
nificant at p , 0.01.
Figure 5a,b shows the model fit for the observed versus
predicted effects on FB1 and FB2, respectively. The fitted
line gave a good correlation between these parameters (FB1,
r2 ¼ 0.9736; FB2, r2 ¼ 0.9530).
3.3. Validation of the modelThe model was subsequently tested to examine whether it
could be used at temperatures of 358C at different aw levels.
These conditions were not originally included in the model
because of the limited data at these conditions. Table 4 shows
the effect on the observed and predicted FB1 and FB2 pro-
duction under these conditions. At 358C and 0.98 aw the
0.950
0.980
0.995
0.9300.950
0.9800.995
0.9500.995
0
5000
10 000
15 000
20 000
25 000
FUM19
FUM14
FUM11
FUM13
FUM1
FUM16
FUM12
FUM10
FUM7
20
25
30
gene
exp
ress
ion
(rel
ativ
e to
B-t
ubul
in g
ene)
FUM genes wat
er a
ctiv
ity-te
mpe
ratu
re (°
C)
Figure 2. Effect of temperature�water activity interactions on relative expression of nine FUM genes grown on a YES medium. (Online version in colour.)
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model predicted much higher FB1 production than was actu-
ally observed, whereas the FB2 model-predicted production
was slightly lower than observed in the same conditions of
aw and temperature. In contrast, the FB2 produced was similar
to the predicted value at 358C and 0.995 aw.
3.4. Ternary relationships between gene expression,environmental factors and FB1 and FB2 production
By using a standardized signal from the microarray dataset, it
was possible to examine the relative relationship between the
activity of the important FUM1 gene in the biosynthetic
pathway and related cluster genes in the pathway (FUM7,FUM10, FUM11, FUM12, FUM13, FUM14, FUM16 and
FUM19) at the same time in ternary diagrams in relation to
aw, temperature and FB1 and FB2 production. Only the
expression of FUM1, FUM11, FUM13, FUM14 and FUM19showed a significant effect on the synthesis of both fumoni-
sins, while the other genes exhibited very little response or
the effects were variable (data deposited in Cranfield
Health share point facility; Applied Mycology).
Figure 6 shows the effect of FUM1, FUM11 and FUM13relative gene expression on FB1 (i) and FB2 (ii) production,
respectively. These were calculated using the model below:
FB1 production ðmg ml�1Þ
¼ 10:7FUM1
ðFUM1þ FUM11þ FUM13Þ
� �
� 28:28FUM11
ðFUM1þ FUM11þ FUM13Þ
� �
þ 32:9FUM13
ðFUM1þ FUM11þ FUM13Þ
� �ð3:4Þ
and
FB2 production ðmg ml�1Þ
¼ �0:67FUM1
ðFUM1þ FUM11þ FUM13Þ
� �
� 11:0FUM11
ðFUM1þ FUM11þ FUM13Þ
� �
þ 15:89FUM13
ðFUM1þ FUM11þ FUM13Þ
� �:
ð3:5Þ
The production of FB1 proportionally increased to FUM11gene transcription but not FUM13. Notably, FUM1 was
down-regulated during FB1 overexpression.
For FB2 production, the relative expression of FUM11 and
FUM13 was inversely related to this parameter. As the
FUM11 and FUM13 expression increased, the production of
FB2 was reduced. FUM1 expression was weakly correlated
to the production of fumonisin B2.
Similar ternary diagrams for the interaction between
FUM1 and the FUM cluster genes FUM19 and FUM14 are
presented in figure 7. The relative expression of the three
genes in relation to FB1 and FB2 production was calculated
based on
FB1 production ðmg ml�1Þ
¼ 8:7FUM1
ðFUM1þ FUM19þ FUM14Þ
� �
þ 0:8FUM19
ðFUM1þ FUM19þ FUM14Þ
� �
þ 19:7FUM14
ðFUM1þ FUM19þ FUM14Þ
� �ð3:6Þ
mean(a)
(b)
mean ± 0.95 s.e.
meanmean ± 0.95 s.e.
0.92
0.93
0.94
0.95
0.96
0.97
0.98
0.99
1.00
1.01
water activity
0
2
4
6
8
10
12
14
16FB
1 (µ
g m
l–1 )
FB1
(µg
ml–
1 )
temperature (°C)
020 22 24 26 28 30 32 34
2
4
6
8
10
12
14
16
Figure 3. The effect of (a) water activity (aw) and (b) temperature on thefumonisin B1 production by a strain of F. verticillioides. Bars indicate standarderror of the means.
(a)
(b)
meanmean ± 0.95 s.e.
meanmean ± 0.95 s.e.
water activity
0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
4.5
20 22 24 26 28 30 32 34temperature (°C)
0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
4.5
FB2
(µg
ml–
1 )FB
2 (µ
g m
l–1 )
0.92
0.93
0.94
0.95
0.96
0.97
0.98
0.99
1.00
1.01
Figure 4. The effect of (a) water activity (aw) and (b) temperature on thefumonisin B2 production by a strain of F. verticillioides. Bars indicate standarderror of the means.
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Table 1. Experimental data and model estimation for FB1 and FB2 at different temperatures, water activity and fungal growth rate of the strain of Fusariumverticillioides.
temp.(88888C)
wateractivity
m+++++ s.d.(mm d21)
experimental model estimation
FB1+++++ s.d.(mg ml21)
FB2+++++ s.d.(mg ml21)
FB1+++++ s.d.(mg ml21)
FB2+++++ s.d.(mg ml21)
20 0.95 3.52+ 0.03 9.27+ 0.62 1.67+ 0.17 9.32+ 0.08 1.65+ 0.01
20 0.98 8.29+ 0.37 13.49+ 5.69 4.31+ 0.27 13.59+ 0.89 5.65+ 2.48
20 0.995 9.86+ 0.16 15.25+ 1.11 0.00+ 0.00 15.21+ 0.25 20.35+ 1.2
25 0.93 1.70+ 0.08 0.71+ 0.71 0.47+ 0.47 0.85+ 0.05 0.45+ 0.00
25 0.95 5.26+ 0.09 11.65+ 2.46 6.96+ 1.96 11.58+ 0.21 6.99+ 0.12
25 0.98 11.72+ 0.39 5.39+ 1.11 2.76+ 0.82 5.15+ 0.17 1.66+ 0.35
25 0.995 14.68+ 0.12 2.46+ 1.83 0.00+ 0.00 2.48+ 0.02 0.16+ 0.01
30 0.95 6.21+ 0.32 1.54+ 0.25 0.87+ 0.10 1.46+ 0.08 1.03+ 0.08
30 0.995 10.47+ 0.29 3.56+ 0.99 0.06+ 0.06 3.59+ 0.09 0.28+ 0.13
Table 2. Statistical analysis of the ANOVA for the fit of the model and the regressed coefficients and the corrected totals for FB1 and FB2 by F. verticillioides.
sum of squares d.f. mean squares F-value p-value
ANOVA: FB1
regression 1819.656 13 139.9735 120.35 0
residual 23.260 20 1.1630
total 1842.916 33
corrected total 847.539 32
regression versus corrected total 1819.656 13 139.9735 5.2849 0.000061
ANOVA: FB2
regression 202.5820 13 15.58323 49.97915 0
residual 6.2359 20 0.31179
total 208.8179 33
corrected total 132.6695 32
regression versus corrected total 202.5820 13 15.58323 3.75869 0.001121
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and
FB2 production ðmg ml�1Þ
¼ �2:98FUM1
ðFUM1þ FUM19þ FUM14Þ
� �
þ 1:83FUM19
ðFUM1þ FUM19þ FUM14Þ
� �
þ 5:92FUM14
ðFUM1þ FUM19þ FUM14Þ
� �:
ð3:7Þ
The production of both fumonisins FB1 and FB2 was
increased with higher relative expression of the FUM19gene. In contrast, this fumonisin production was inversely
related to FUM14 signal. As the FUM1 gene expression was
increased, the production of FB1 was reduced and that of
FB2 increased.
The effect of aw on the relative gene expression (standar-
dized) of the genes (i) FUM1, FUM11 and FUM13 and (ii)
FUM1, FUM14 and FUM19 was calculated using the relative
fractions ( f ) of these individual genes (figure 8).
For aw, this was
aw ¼ 0:99FUM1
ðFUM1þ FUM11þ FUM13Þ
� �
þ 1:09FUM11
ðFUM1þ FUM11þ FUM13Þ
� �
þ 0:79FUM13
ðFUM1þ FUM11þ FUM13Þ
� �ð3:8Þ
and
aw ¼ 0:93FUM1
ðFUM1þ FUM14þ FUM19Þ
� �
þ 1:07FUM14
ðFUM1þ FUM14þ FUM19Þ
� �
þ 0:88FUM19
ðFUM1þ FUM14þ FUM19Þ
� �: ð3:9Þ
As the aw increased, the expression of the genes FUM11 and
FUM14 was reduced. The higher expression of FUM1 was
observed under dried conditions (0.94 aw), and FUM13signal decreased at these aw levels. The transcription of
FUM19 was less affected by water availability.
Figure 9 shows the relative expression of FUM1 and the
biosynthetic genes FUM11, FUM13, and FUM14, FUM19 in
relation to temperature. These relationships were calculated
as shown below:
Tð8CÞ ¼ 19:3FUM1
ðFUM1þ FUM11þ FUM13Þ
� �
þ 96:07FUM11
ðFUM1þ FUM11þ FUM13Þ
� �
� 37:7FUM13
ðFUM1þ FUM11þ FUM13Þ
� �ð3:10Þ
and
Tð8CÞ ¼ 17:0FUM1
ðFUM1þ FUM14þ FUM19Þ
� �
þ 28:0FUM14
ðFUM1þ FUM14þ FUM19Þ
� �
þ 31:7FUM19
ðFUM1þ FUM14þ FUM19Þ
� �: ð3:11Þ
There was an inverse proportional effect of temperature on
the expression of FUM11 and FUM19. Thus, the higher the
temperature, the lower FUM11 and FUM19 gene signal. The
FUM1 gene transcription was proportionally increased with
temperature. The expression of FUM13 and FUM14 was simi-
lar under different temperature conditions.
4. DiscussionThis study has examined the impact that environmental factors
can have on FUM cluster genes and the effects that they have on
FB1 and FB2 production by a strain of F. verticillioides. This has
shown that temperature and aw have a profound effect on both
gene expression of key biosynthetic genes as well as signifi-
cantly affecting growth and the phenotypic production of the
toxic secondary metabolites.
The main factors influencing the growth of the strain of
F. verticillioides included environmental temperature and
water availability of the substrate [10,24]. Previous studies
have shown that fungal growth occurs within a wide range
of temperatures, with the optimum ranging from 22.5 to
27.58C and a minimum water availability of 0.87 [25,26].
Table 3. The estimates and the dependence on the main factors that arerelated to the model for (a) FB1 and (b) FB2 production by F. verticillioides.
parameter estimate
(a)
gene cluster for FB1 biosynthesis
a1 (FUM19) 6.1055
a2 (FUM14) 27.5810
a3 (FUM11) 21.5341
a4 (FUM13) 27.3617
a5 (FUM1) 29.9819
a6 (FUM16) 2.0508
a7 (FUM12) 9.1501
a8 (FUM10) 1.2260
a9 (FUM7) 2.7745
mixed-growth-associated product formation
a 1.2446
b 27.8988
initial inoculum
X0 2.1364
Arrhenius’s coefficient
b1 24.7994
(b)
gene cluster for FB2 biosynthesis
a1 (FUM19) 2.5770
a2 (FUM14) 24.0061
a3 (FUM11) 25.5225
a4 (FUM13) 28.1792
a5 (FUM1) 26.7091
a6 (FUM16) 1.5228
a7 (FUM12) 5.8662
a8 (FUM10) 6.2729
a9 (FUM7) 1.4678
mixed-growth-associated product formation
a 22.3613
b 6.8545
initial inoculum
X0 4.4922
Arrhenius’s coefficient
b1 28.8764
18(a)
(b)
1614
1210
8
8
7
6
5
4
3
2
1
0
64
2
0
1 2 3 4 5 6
2 4 6
pred
icte
d FB
2 (µ
g m
l–1 )
pred
icte
d FB
1 (µ
g m
l–1 )
observed FB2 (µg ml–1)
observed FB1 (µg ml–1)
8 10 12 14 16 18
Figure 5. The correlations between the observed and predicted values based onthe models developed for (a) FB1 and (b) FB2 production by F. verticillioides.
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Our data indicate that 20–258C and 0.995 aw were the opti-
mum conditions for growth of the strain used in this study.
For FB1 and FB2 production, the optimum conditions were
0.98–0.995 aw and 208C or 20–308C, respectively. The opti-
mum temperature and aw previously reported for inducing
fumonisin production ranged from 20 to 258C and 0.95–
0.99, while no production observed at �0.93 aw and 108C[10,27]. Similar results were shown by Samapundo et al.[12], although with lowered aw values and a temperature
range of 15–258C. For a F. verticillioides type strain (NRRL
3248), toxin production was higher when it was grown
with 50 per cent water content and 218C [28]. There are
strain differences in terms of both FUM1 gene expression
and fumonisin production. Previous studies with different
strains of both F. verticillioides and F. proliferatum showed
that relative expression on glycerol-modified water stress
media resulted in relative similar effects on FUM1 gene
expression by different strains. However, with ionic solutes
such as NaCl this was not so, perhaps owing to toxicity of
the ionic solute at higher concentrations [13,14].
The FB biosynthetic gene cluster consists of 17 transcrip-
tional co-regulated genes, nine of which encode enzymes
that catalyse reactions of this pathway [29]. The function of
the others is not known yet. Few studies have investigated
the relationship between the fumonisin production, FUMgene expression and ecological factors [13,14,30–32]. Here,
we developed ternary diagrams to examine the link between
the FUM1 a key gene and eight other pathway genes (FUM7,FUM10, FUM11, FUM12, FUM13, FUM14, FUM16 and
FUM19) in relation to environmental conditions and fumoni-
sin synthesis. This has shown that the relative expression of
FUM1 to that of FUM11, FUM13, FUM14 and FUM19 are
related and influenced by aw and temperature for both FB1
and FB2 production. Jurado et al. [13] described that signifi-
cant and prolonged increase in water stress (e.g. 0.93 aw)
enhanced FUM1 expression, while a mild water stress
(0.98–0.95 aw) did not significantly affect gene transcripts.
According to Marin et al. [14], FUM1 transcription was
enhanced with an increase in non-ionic water stress and the
peak of expression occurred at 208C.
Our results also showed the correlation of FUM1, FUM11,
FUM13, FUM14 and FUM19 expression with FB1 and FB2 pro-
duction under different conditions. The synthesis of these
fumonisins was reduced at higher expression levels of
Table 4. Validation of the model under conditions not included in the model for (a) FB1 and (b) FB2 production by a strain of F. verticillioides.
temp. (88888C) water activity
growth FB1 (mg ml21) FB2 (mg ml21)
m+++++ s.d. (mm d21) experimental model experimental model
(a)
35 0.98 0.17 0.24 4.69 2.86 1.5
s.d. +0.017 +0.03 +1.20 +0.23 +0.15
temp. (88888C) water activity m+++++ s.d. (mm d21)FB2 (mg ml21)experimental
FB2 (mg ml21)model +++++s.d.
(b)
35 0.98 5.79 2.86 1.28 0.42
35 0.995 2.2 6.59 7.80 0.80
0
0.25
0.50
0.75
1.00FUM10
0.25
0.50
0.75
1.00
FUM110 0.25 0.50 0.75 1.00
0 0.25 0.50 0.75 1.00
FUM13
2010
30
0
0
0.25
0.50
0.75
1.00FUM10
0.25
0.50
0.75
1.00
FUM11 FUM13
0
10
5
(a)
(b)
Figure 6. Ternary diagrams of the relative relationship between expression ofFUM1 and FUM11 and FUM13 in relation to (a) FB1 (FB1 mg ml21 ¼
228.28 � FUM11 þ 32.94 � FUM13 þ 10.70 � FUM1) and (b) FB2
(FB2 mg ml21¼211.09 � FUM11þ15.89 � FUM13 2 0.67 � FUM1)production by F. verticillioides.
0
0.25
0.50
0.75
1.00FUM1
0
0.25
0.50
0.75
1.00
FUM190 0.25 0.50 0.75 1.00
FUM14
10
146
2 18
0
0.25
0.50
0.75
1.00FUM10
0.25
0.50
0.75
1.00
FUM190 0.25 0.50 0.75 1.00
FUM14
0
2
4
Figure 7. Ternary diagrams of the relative relationship between expression of FUM1and FUM19 and FUM14 on (a) FB1 (FB1 mg ml21¼20.80� FUM19 þ19.70� FUM14 þ 8.70 � FUM1) and (b) FB2 (FB2 mg ml21 ¼21.83 �FUM19 þ 5.92� FUM14 2 2.98� FUM1) production by F. verticillioides.
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FUM14, while a higher expression of FUM19 was correlated
with an increased production of both fumonisins. FUM11modulated positively or negatively the production of FB1 and
FB2, respectively. Previously, Lopez-Errasquın et al. [32] sugges-
ted a linear relationship between FUM1 and FUM19 transcripts
and fumonisin production for a strain of F. verticillioidesincubated at 208C for 14 days. Lazzaro et al. [30] identified a
0
0.25
0.50
0.75
1.00FUM10
0.25
0.50
0.75
1.00
FUM110 0.25 0.50 0.75 1.00
0 0.25 0.50 0.75 1.00
FUM13
0.850.900.95
1.00
0
0.25
0.50
0.75
1.00FUM10
0.25
0.50
0.75
1.00
FUM14 FUM19
0.900.940.98
1.00
(a)
(b)
0.80
Figure 8. Ternary diagrams of the relative relationship between expression of (a)FUM1, FUM11 and FUM13 (aw ¼ 1.09 � FUM11 þ 0.79� FUM13 þ0.99 � FUM1) and (b) between FUM1, FUM19, FUM14 (aw ¼ 1.07 �FUM14 þ 0.88 � FUM19 þ 0.93� FUM1) in relation to water activity (aw).
0
0.25
0.50
0.75
1.00FUM1
0
0.25
0.50
0.75
1.00
FUM110 0.25 0.50 0.75 1.00
FUM13
FUM140 0.25 0.50 0.75 1.00
FUM19
40
60
20
080
0
0.25
0.50
0.75
1.00FUM1
0
0.25
0.50
0.75
1.00
28
26
24
22
20
18
30
(a)
(b)
Figure 9. Ternary diagrams of the relationship between expression of (a)FUM1, FUM11 and FUM13 (temperature (8C) ¼ 96.07 � FUM11 2
37.79 � FUM13 þ 19.36 � FUM1) and (b) between FUM1, FUM19 andFUM14 (temperature (8C) ¼ 28.09 � FUM14 þ 31.77 � FUM19 þ17.0 � FUM1) in relation to temperature for F. verticillioides.
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positive correlation between fumonisin synthesis and
expression of two FUM genes, FUM2 and FUM21, at different
aw and temperature regimes. In the present study effects on
FUM21, considered a regulatory gene of fumonisin biosynthesis
[33], was not included because the role of this gene was not elu-
cidated when the microarray was developed. However, effects
on the FUM1 gene may provide an insight into the way
FUM21 may respond. This variable correlation of gene
expression and production of the toxin may not be that unex-
pected, because usually the expression of only a few genes
(key genes) is directly correlated with the toxin biosynthesis.
Scherm et al. [34], for example, showed this aspect for aflatoxin
biosynthetic genes. Taken together, our findings further sup-
port the use of ternary diagrams as a reliable approach to
investigate the relationship between different key structural
and regulatory genes and their impact on the production of sec-
ondary metabolites such as aflatoxins [18,35] and fumonisins
(the present study).
Besides water availability, several factors can affect fumoni-
sin production including nitrogen limitation and pH of 5.9 [36].
Kohut et al. [31] reported that FUM1 and FUM8 expression,
together with fumonisin production, was induced by nitrogen
starvation in F. proliferatum cultures. However, the presence
of a mycotoxin gene, for example FUM11, does not comple-
tely confirm that the pathogen has the potential to produce
fumonisin [37].
It is necessary to also consider this study in the context
of what might happen when biotic variables are included.
Thus, the interaction with ripening maize kernels, especially
where plant physiological and nutritional effects may be
important, also needs to be considered [38]. Indeed they
suggest that the rate of drying of the maturing maize kernels
critically affects the contamination with fumonisins. Thus, at
the very early dough stage the moisture content (m.c.) is
about 40 per cent (¼0.99 aw) with no water stress effects,
this decreases to 30–35% m.c. at the mid-dough stage
(¼ 0.95 aw) and to 20–25% (0.90–0.85 aw) at full maturity
over a period of about 4–6 weeks [38,39]. This shows that
the window of opportunity for colonization by F. verticillioidesand fumonisin contamination is limited to more than 0.93 aw.
Thus, the range of conditions we have chosen in relation
to aw � temperature stress interactions is in the relevant
range. However, the nutritional quality of maize changes
during ripening and this may further influence the capacity
for biosynthesis of fumonisins. This may also influence the
interaction with other mycobiota including A. flavus, which
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colonizes the ripening maize cobs over a wider aw range than
Fusarium section Liseola during these critical phases of plant
development.
Very few attempts have been made to try and integrate
molecular expression data under different environmental
stresses with phenotypic secondary metabolite data to
develop predictive models. Recently, Abdel-Hadi et al. [18]
demonstrated that for A. flavus and aflatoxin production it
was possible to use the mixed growth model for secondary
metabolite production and link this to a linear model of the
gene expression data of up to 10 key genes for predicting afla-
toxin production under different interacting environmental
conditions. The present study has used this mixed growth
model to try and relate the relative expression of nine bio-
synthetic genes under different environmental conditions
to growth and production of FB1 and FB2 for a strain of
F. verticillioides. This made it possible to develop a predictive
model which provided a good linear regression fit between
the predicted and observed fumonisin production. This
model is important for developing an integrated systems
approach by combining gene expression, ecophysiological
influences and growth data to predict fumonisin production.
This could further help in developing a more targeted
approach to design prevention strategies to control fumonisin
biosynthesis in staple food commodities. For example, use of
RNAi systems to interfere and reduce the function of the
FUM1 or FUM21 gene may be an approach for the minimiz-
ation of fumonisins in cereals [20]. This approach could be a
powerful tool in examining the impact of climate change
factors on toxin production [39].
ce10:20130
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