ENGINEERING MATHEMATICS – III
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Transcript of ENGINEERING MATHEMATICS – III
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 1
SCHEME & SYLLABUS OF
III & IV SEMESTERS
B.E. BIOTECHNOLOGY 2020-21
(175 credits scheme)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 2
VISION AND MISSION OF THE DEPARTMENT
VISION:
To be a center of excellence in education and research in Biotechnology
to address the global challenges
MISSION:
1. To establish close collaboration with industry to offer industry-
relevant curricula and pursue demand driven research.
2. To continuously upgrade the infrastructure to develop the state-of-
the-art facilities for training and research.
3. To provide a good learning environment to help students imbibe
professional ethics, communication skills, team spirit and societal
commitment.
4. To offer skill development programs to enhance employability of
graduates in collaboration with industry and Government support.
PROGRAMME EDUCATIONAL OBJECTIVES (PEOs)
Graduates from the Biotechnology program are expected to achieve the
following Program Educational Objectives within a few years of
graduation:
1. The graduates of the program are practicing engineering profession
as clinical data coordinator, clinical research associate, IT system
engineers, bioinformatics analyst, Quality controller and Quality
assurance analyst, business development executive, research
associate with a strong skill set as data analyst, product specialist,
computer programmer, molecular biologist, good planning,
communication and execution ability for IT and BT industries.
2. The graduates of the program are engaged in higher studies leading
to professional degree in specific domain such as biological
sciences, computational biology and also engaged in life-long
learning.
3. The graduates of the program practice profession with high ethical
and moral values and have developed good communication skills
and leadership qualities while working as a member of the team or
as a team leader.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 3
PROGRAM SPECIFIC OUTCOMES (PSOs):
1. Students will be able to conduct the Upstream and Downstream
experiments to produce, optimize, separate, purify and characterize
biological compounds.
2. Students will be able to solve advanced biological problems with the
technical skills of Bioinformatics, Biomolecular simulation,
Proteomics and Genomics using computational techniques.
3. Students will be able to analyze Biopharmaceutical challenges of
Biological systems by applying the concepts of Biological sciences.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 4
PROGRAMME OUTCOMES (POs)
PO1 Engineering knowledge: Apply the knowledge of mathematics,
science, engineering fundamentals, and an engineering
specialization to the solution of complex engineering problems.
PO2 Problem analysis: Identify, formulate, review research literature,
and analyze complex engineering problems reaching
substantiated conclusions using first principles of mathematics,
natural sciences, and engineering sciences.
PO3 Design/development of solutions: Design solutions for complex
engineering problems and design system components or
processes that meet the specified needs with appropriate
consideration for the public health and safety, and the cultural,
societal, and environmental considerations.
PO4 Conduct investigations of complex problems: Use research-
based knowledge and research methods including design of
experiments, analysis and interpretation of data, and synthesis
of the information to provide valid conclusions.
PO5 Modern tool usage: Create, select, and apply appropriate
techniques, resources, and modern engineering and IT tools
including prediction and modeling to complex engineering
activities with an understanding of the limitations.
PO6 The engineer and society: Apply reasoning informed by the
contextual knowledge to assess societal, health, safety, legal and
cultural issues and the consequent responsibilities relevant to
the professional engineering practice.
PO7 Environment and sustainability: Understand the impact of the
professional engineering solutions in societal and environmental
contexts, and demonstrate the knowledge of, and need for
sustainable development.
PO8 Ethics: Apply ethical principles and commit to professional
ethics and responsibilities and norms of the engineering practice.
PO9 Individual and team work: Function effectively as an individual,
and as a member or leader in diverse teams, and in
multidisciplinary settings.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 5
PO10 Communication: Communicate effectively on complex
engineering activities with the engineering community and with
society at large, such as, being able to comprehend and write
effective reports and design documentation, make effective
presentations, and give and receive clear instructions.
PO11 Project management and finance: Demonstrate knowledge and
understanding of the engineering and management principles
and apply these to one’s own work, as a member and leader in a
team, to manage projects and in multidisciplinary environments.
PO12 Life-long learning: Recognize the need for, and have the
preparation and ability to engage in independent and life-long
learning in the broadest context of technological change.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 6
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Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 7
ENGINEERING MATHEMATICS – III
Contact Hours/Week : 4+0+0 (L+T+P) Credits : 4
Total Lecture Hours : 52 CIE Marks : 50
Course Code : 3RMAT3D SEE Marks : 50
Course objectives: This course will enable students to: 1. Introduce the concept of analytic function, transformation for
mapping. 2. Introduce the concept of complex variables to evaluate the integrals. 3. Introduce the concept of partial differential equations, use
separation of variable method to solve wave, heat and Laplace
equations. 4. Make the student to apply the numerical methods to solve algebraic
and transcendental equations. 5. Solve the system of equation analytically and numerically.
Unit I
Complex Variables: Functions of complex variable, Definition of Limit,
Continuity, Differentiability. Analytic functions, Cauchy’s-Reimann
equation in Cartesian and polar forms (Statement only), Properties of
analytic functions. Geometrical representation f(z)=w, Conformal
transformation: w=ez, w=𝑧 +1
𝑧,w=z2, w=cosh z.
(PO1: M: Knowledge transfer to solve simple engineering problems)
12 Hrs
Unit II
Complex Integration: Bilinear transformation, Properties, Complex
integration, Cauchy’s theorem (statement only), Converse of Cauchy’s
theorem, Cauchy’s integral formula (statement only), zeros &
singularities of an analytic function, residues, residues theorem,
calculation of residues.
(PO1: M: Knowledge transfer to solve simple engineering problems)
9 Hrs
Unit III
Partial differential equations (P.D.E.) : Formation of Partial Differential
Equation, Solution of Langrange’s Linear P.D.E. of the type Pp+Qq=R.
Method of Separation of Variables. Applications of P.D.E.:
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 8
Classification of PDE, solution of one dimensional heat wave and two
dimensional Laplace’s equation by the method of separation of variables.
(PO2: M: Identifies all relevant constraints and requirements and
formulates an accurate description of the problem) 11 Hrs
Unit IV
Roots of equation: Introduction, Bracketing methods – Bisection &
Regula-falsi methods. Open methods – Secant method, Newton-Raphson
method, multiple roots and Muller’s method.
(PO2: M: Identifies all relevant constraints and requirements and
formulates an accurate description of the problem) 10 Hrs
Unit V
System of linear algebraic equations: Rank of a matrix by echelon
form, Consistency of a system of linear equations, Gauss elimination
method, Gauss-Jordan method. Iterative methods – Jacobi and Gauss-
Seidel iterative methods.
(PO2: M: Identifies all relevant constraints and requirements and
formulates an accurate description of the problem)
10 Hrs
TEXT BOOKS:
1 B.S.Grewal “Higher Engineering Mathematics”, Khanna Publications,
43rd Edition, 2015, 978-8193328491
2 B.S.Grewal “Numerical Methods”, Khanna Publications, 43rd Edition,
2014, 978-8174092489
REFERENCE BOOKS:
1 Erwin Kreyszig “Advanced Engineering Mathematics”, Wiley
Publications,10rd Edition, 2015, 978-
8126554232
2 C. Ray Wylie and
Louis C. Barrett
“Advanced Engineering Mathematics”, Tata-
McGraw Hill, 6th Edition, 2005, 978-
8177585469
3 Louis A. Pipes and
Lawrence R. Harvill
“Applied Mathematics for Engineers and
Physicists”, McGraw Hill, 3 Edition, 2014, 978-
0486779515
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 9
Course Outcomes: After the completion of this course, students will be
able to:
1. Apply basic mathematical operations on complex numbers in
Cartesian and polar forms. Determine
continuity/differentiability/analyticity of a function and find the
derivative of a function. Identify the transformation. (BL: L1, L3)
(PO1-M)
2. Evaluate a contour integral using Cauchy’s integral formula.
Compute singularities and also the residues. (BL: L3) (PO1-M)
3. Formulate and solve partial differential equations. Use of
separation of variable method to solve wave, heat and Laplace
equations. (BL: L4) (PO2-M)
4. Compute the roots of an algebraic or transcendental equation.
(BL: L3) (PO2-M)
5. Solve the system of equation analytically and numerically.(BL: L3)
(PO2-M)
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES Program articulation matrix
Course PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
3RMAT3D 2 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Apply basic mathematical operations on complex numbers in Cartesian and polar forms. Determine continuity/differentiability/analyticity of a function and find the derivative of a function. Identify the transformation.
2
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 10
Evaluate a contour integral using Cauchy’s integral formula. Compute singularities and also the residues.
2
Formulate and solve partial
differential equations. Use of
separation of variable method to solve
wave, heat and Laplace equations
2
Compute the roots of an algebraic or transcendental equation
2
Solve the system of equation analytically and numerically 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 11
MICROBIOLOGY
Contact Hours/Week : 4 +0+0 (L+T+P) Credits : 4
Total Lecture Hours : 52 CIE Marks : 50
Course Code : 3RBT01 SEE Marks : 50
Course objectives: This course will enable students to:
1. Study basic structure of prokaryotes and eukaryotes, concepts of
isolation, culturing of microorganisms.
2. Staining of microorganism and to study the various types of microbes.
3. Study growth and reproduction in bacteria, preservation of
microorganisms.
4. Enumeration of soil, water and air microorganisms and control of
microorganisms.
5. Understanding general characteristics of virus, its classification &
reproduction of viruses.
Unit I
Introduction: History of microbiology, Scope of microbiology and
branches, Origin of life: biogenesis and abiogenesis. Major contributions
of Antony Van Leeuwenhoek, Louis Pasteur, Alexander Fleming, Robert
Koch and Joseph Lister. Prokaryotes & Eukaryotes: Distinguishing
features with diagrammatic illustrations. Types of microorganisms -
Morphology and fine structure of Bacteria, viruses, Fungi, Algae,
protozoa.
Culturing of microorganisms: Bacteria, Culturing of bacteria,
Nutritional requirements – physical and chemical, Different types of
media – Solid, semisolid and broth; synthetic media, Special media-
blood agar, Selective media, complex media, indicator media, differential
media, transport media; anaerobic media- (thioglycolate, Robertson’s
media, micro aerophilic). Composition and preparation of basic culture
media - Nutrient agar, EMB, Mc.Conkey and blood agar. Pure culture
techniques – Serial dilution method, pour plate, spread plate, streak
plate, lawn culture and stab culture and cultural characteristics (colony
characteristics) – shape, size, color, elevation, texture, margin,
consistency, pigmentation and optical features. Episome (F, R, Ti as
example); Bergey’s Manual of Systematic Bacteriology, Molecular
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 12
approaches to Taxonomy- Taxonomic classification of microbes using
molecular markers- 16s rRNA typing; taxonomic implications of DNA
base composition. Concepts of Anesthesia and euthanasia. (PO1-
LKnowledge transfer: Knowledge of basic science).
12 Hrs
Unit II
Microscopy: Study of microscopes and its types – construction, working
principle, working method and its applications; Bright Field Microscopy,
Dark-Field Microscopy, Phase Contrast Microscopy, Fluorescence
Microscopy, Electron microscopy (SEM, TEM) (PO5-L Modern tool
usage).
Staining of Microorganisms:
Types of Stains- Acidic, Basic and Neutral Stain. Theories of Staining;
Physical - Absorption, Osmosis and Capillary and Chemical - Ion
Exchange Method. Staining of microorganisms-simple staining, negative
staining, Differential Staining-Gram staining and Acid-Fast Bacilli
Staining, structural staining (endospore, capsule, flagella). (PO1-L
Knowledge transfer: Knowledge of basic science)
10 Hrs
Unit III
Reproduction and Growth of Microorganisms: Reproduction in
Prokaryotes; modes of Cell Division- Binary Fission, Budding and
Fragmentation, Continuous culture-Chemostat, Synchronous culture,
Direct and Indirect measurement of growth, Factors affecting growth -
Nitrogen content, Turbidometric, Nucleic Acid content etc. Growth
principles of nutrition, influence of Environmental factors-pH,
Temperature, Oxygen, Heavy metals and other compounds, Oxygen
toxicity: Study of catalase, peroxidase, superoxidase dismutase,
mechanism of oxygen toxicity;
Maintenance of cultures– periodic transfer, using mineral oil,
lyophilization and by low temperature. (PO1-M Knowledge transfer:
Knowledge of basic science). 10 Hrs
Unit IV
Enumeration of microorganisms:
Agar-Plate culture technique, Direct microscopic examination, by
enrichment culture technique, streak plate method. Soil microorganisms
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 13
– Bacteria, Fungi, Algae, Protozoa and Viruses. Interaction among soil
microorganisms-symbiosis, mutualism, commensalism, antagonism,
competition, parasitism and predation. (PO1-LKnowledge transfer:
Knowledge of basic science)
Control of Microorganisms: Definition used in Microbial control
methods, the pattern of microbial death.
Sterilization methods:
Physical methods: Heat - dry heat – flaming, red hot and hot air oven,
moist heat- Pasteurization, autoclave, tyndallization, low temperatures,
filtration, radiation – ionizing and non-ionizing.
Chemical methods: phenolics, alcohols, halogens, heavy metals,
quaternary ammonium compounds, aldehydes, Sterilizing gases,
chemotherapeutic agents. (PO1-LKnowledge transfer: Knowledge of
basic science, PO8-L professional ethics and responsibilities)
Other Methods: Broad and narrow spectrum antibiotics and mode of
action, anti-fungal and antiviral methods.
Microbial pathogens and Pathogenesis: Common diseases caused by
microbes; etiology, transmission and symptoms of the disease - Bacterial
diseases: Typhoid, Tuberculosis, Cholera; Fungal diseases: Candidiasis.
Protozoan diseases: Malaria, Gonorrhea. (PO6-M Knowledge to health)
10 Hrs
Unit V
Viruses: Morphology, Classification and Replication: General
Characteristics of viruses: Basic morphology of viruses - Helical capsids,
icosahedral capsids, virus with capsids of complex symmetry, viral
envelopes and enzymes, virion size, genetic material, other chemical
components; replication of viruses. Bacteriophages as therapeutic
agents; morphology and chemical composition of bacteriophages.
Classification and nomenclature of bacteriophages: system of
classification based on differences in transcriptional process;
Bacteriophages of E.coli. Bacteriophage life cycle: The lytic Life cycle -
Virulent phages. The lysogenic Life Cycle-Temperate phages; Cultivation
of viruses, Principles of viral taxonomy. Viroids and Virusoids, Prions.
Viral diseases: Ebola, Hepatitis, Herpes, Polio; Zika, COVID-19. (PO1-L
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 14
Knowledge transfer: Knowledge of basic science,PO8-L professional
ethics and responsibilities)
10 Hrs
TEXT BOOKS:
1 Stanier, John Ingraham, Mark Wheelis.
General Microbiology, Mac- Millan Pub. Published by Macmillan, Hampshire & London, 5th Edition, 1992, 978-0299108243
2 Michael. J. Pelczar, Chan , Krieg
General Microbiology, W C Brown Pub. Published by Tata McGraw-Hill
Education Pvt. Ltd, 7th Edition, 2007, 978-9350240892
3 Michael T. Madigan, John M.
Martinko, Kelly S. Bender, Daniel H. Buckley, David A. Stahl, Thomas Brock
Brock Biology of Microorganisms,
Benjamin Cummings, 14th Edition, 2014, 978-0132192262
REFERENCE BOOKS:
1 Gerard J, Tortora, Berdell
R Funke, Christine L Case
Microbiology: An Introduction, Pearson
Education, 11th Edition, 2008, 978-
9332575417
2 Ananthanarayan and
Paniker
Textbook of Microbiology, Universities
Press, 8th Edition, 2009, 978-
0199681686
3. Power and Daginawala General Microbiology: Himalaya
Publishing House Pvt. Ltd., Vol I and Vol
II, 5th Edition, 2009, 978-9350240892
Course Outcomes: After the completion of this course, students will be able
to:
1. Distinguish physiological and morphological features of
microorganisms and explain types of media preparation and
culture techniques. And also outline the taxonomy of microbes.
(BL: L1, L2) (PO1-L)
2. Identify microorganisms using microscopy and staining methods.
(BL: L2) (PO1-L, PO5-L)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 15
3. Explain the reproduction, factors affecting growth of
microorganisms and preservation methods. (BL: L2) (PO1-M)
4. Illustrate microbial techniques to isolate, identify and enumerate
the microorganisms. Describe the methods for control of
microorganisms and diseases. (BL: L2) (PO1-L, PO6-M, PO8-L)
5. Explain the morphology, life cycle, characteristics, classification of
viruses and diseases. (BL: L2) (PO1-L, PO8-L)
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
3RBT01 1 1 1 1 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Distinguish physiological and morphological features of microorganisms and explain types of media preparation and culture techniques. And also outline the taxonomy of microbes
1
2
Identify microorganisms using microscopy and staining methods.
1 1 2
Explain the reproduction, factors
affecting growth of microorganisms
and preservation methods.
2
2
Illustrate microbial techniques to isolate, identify, enumerate the microorganisms. Describe the methods for control of microorganisms and diseases.
1 2 1
2
Explain the morphology, life cycle, characteristics, classification of viruses and diseases.
1 1 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 16
BIOCHEMISTRY Contact Hours/Week : 4+0+0 (L+T+P) Credits : 4
Total Lecture Hours : 52 CIE Marks : 50
Course Code : 3RBT02 SEE Marks : 50
Course Objectives: This course will enable students to: 1. Learn about biochemical and physical properties of carbohydrates
and lipids.
2. Understand the basic structural, chemical and physical properties
of biomolecules namely proteins and nucleic acids.
3. Know the fundamentals of photosynthesis reaction and energy
transfer in biological system.
4. Understand the metabolism of carbohydrates and lipids in
biological system.
5. Understand the metabolism reactions of proteins and nucleic acids.
Unit I
Carbohydrates and Lipids:
Basic Concepts: Biochemistry: Definition, Introduction to Biochemistry,
Introduction to Biomolecules (Carbohydrates, Lipids, Proteins, DNA and
RNA) with relevance to Biochemistry and its Functional aspects.
Carbohydrates:
Carbohydrates: Introduction, sources, three major size classes of
carbohydrates (mono, di and polysaccharides), classification of
monosaccharides based on number of C-atoms (classification based on
functional groups: aldoses and Ketoses). Structural aspects of sugars:
pyranose and furanose structures, reducing and non-reducing sugars,
anomers. Structural and functional aspects of biologically important
sugars: maltose, isomaltose, lactose, cellulose, cellobiose, trehalose,
sucrose, raffinose, starch, glycogen, chitin.
Lipids:
Introduction, definition, types: storage, membrane and structural lipids
(structure aspects and properties of each lipid). (P01-L: Knowledge
transfer: Knowledge of basic science)
10 Hrs
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 17
Unit II
Proteins and Nucleic acids:
Basic Concepts:
Introduction to proteins, nucleic acids and hormones.
Proteins:
Amino acids (Structure, classification, and properties of amino acids).
Structural organization: Primary structure, Secondary structure, tertiary
structure and quaternary structure of proteins. Important concepts
related to amino acids: Zwitter ions, pka and isoelectric point. Types of
proteins: Globular, enzymatic, structural, transport proteins and others
(Functional aspects only).
Nucleic acids:
Definition, purine & pyrimidines, nucleosides, nucleotides of DNA &
RNA, base pairing, structure of DNA, Types of DNA, Structure of RNA
and types of RNA (m-RNA r-RNA, t-RNA).
Hormones
Biological important hormones – vasopressin, oxytocin, erythropoietin.
(P01-L: Knowledge transfer: Knowledge of basic science)
12 Hrs
Unit III
Bioenergetics : Energy flow cycle and energy conversions. Structure &
properties of ATP, GTP, FAD& NADP. Photosynthesis: Stages in
Photosynthesis light reactions & dark reactions. Light reactions-
structure of chlorophyll, light harvesting complexes, photo systems
PSI&PSII, photophosphorylation, ancillary pigments. Dark reactions-
Calvin cycle. Electron transport chain and oxidative phosphorylation:
production of ATP, Energetics, Energy balance sheet, oxidative stress.
(P01-M: Knowledge transfer: Knowledge of basic science)
10 Hrs
Unit IV
Metabolism & its regulation:
Carbohydrate Metabolism: Glycolysis- Metabolism & its regulation,
aerobic and anaerobic pathway, TCA cycle, amphibolic role, anaplerotic
reactions of TCA cycle. Glyoxylate cycle, PP pathway & its regulation,
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 18
gluconeogenesis and regulation. Biosynthesis & degradation of
polysaccharides (glycogen).
Lipid Metabolism: Oxidation of fatty acids- α, β and ω types, energetics
of β-oxidation. Biosynthesis of even number saturated fatty acids,
Cholesterol biosynthesis. (P01-M: Knowledge transfer: Knowledge of
basic science) 10 Hrs
Unit V
Amino acid and nucleic acid metabolism: Biosynthesis of amino acid
starting from acetyl CoA (with reference to Oxaloacetate family)-
Asparagine, Threonine, Methionine, and Lysine. Biodegradation of amino
acids, deamination, transamination & urea cycle. Nucleic acid
Metabolism Biosynthesis, biodegradation and regulation of Purines,
Pyrimidines and nucleic acids. (P01-M: Knowledge transfer:
Knowledge of basic science). 10 Hrs
TEXT BOOKS:
1 Nelson & Cox. Lehninger’s Principles of Biochemistry, W.H
Freeman and Company, New York, 5th Edition,
2008, 978-1319108243
2 U. Satyanarayana
and U. Chakrapani
Biochemistry, Books and allied (p) Ltd.
Kolkata, 4th Edition, 2008, 978-9351529255
REFERENCE BOOKS:
1 Stryer Biochemistry, W.H Freeman and company,
5th Edition, 2010, 978-1319026455
2 Donald Voet, Charlotte
W. Pratt, Judith G. Voet
Principles of Biochemistry, Wiley
Publication, 4th Edition, 2013, 978-
1319108243
Course Outcomes: After the completion of this course, students will be
able to:
1. Memorize and classify the biological molecules like carbohydrates and
lipids based on structural and functional groups. (BL: L1, L2) (PO1-L)
2. Memorize and classify the biological molecules like Proteins and nucleic acids based on structural and functional groups, further to discuss the importance of biologically important peptides. (BL: L1, L2) (PO1-L).
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 19
3. Explain the concepts of cell energetics by memorizing the knowledge
of Energy flow cycle and energy conversions. (BL: L2) (PO1-M)
4. Describe the concepts of carbohydrate and lipid metabolism and
explain the products of metabolism. (BL: L2) (PO1-M)
5. Describe the concepts of protein and nucleic acid metabolism and
explain the products of metabolism. (BL: L2) (PO1-M)
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
3RBT02 2 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PS
O1
PS
O2
PS
O3
Memorize and classify the biological molecules like carbohydrates and lipids based on structural and functional groups.
1 2
Memorize and classify the biological molecules like Proteins and nucleic acids based on structural and functional groups, further to discuss the importance of biologically important peptides.
1 2
Explain the concepts of cell energetics
by memorizing the knowledge of Energy
flow cycle and energy conversions.
2 2
Describe the concepts of carbohydrate and lipid metabolism and explain the products of metabolism.
2 2
Describe the concepts of protein and nucleic acid metabolism and explain the products of metabolism.
2 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 20
BIOPROCESS CALCULATIONS
Contact Hours/Week : 3+0+0 (L+T+P) Credits : 3.0
Total Lecture Hours : 39 CIE Marks : 50
Course Code : 3RBT03 SEE Marks : 50
Course Objectives: This course will enable students to:
1. Introduce the principles and calculation techniques in bioprocess
engineering.
2. Acquaint students with material and energy balance calculations.
3. Teach basic calculation techniques in bioprocesses involving cell
growth and biochemical reactions.
4. Illustrate the significance of bypass, recycle, and purging
operations in bioprocess engineering and introduce relevant
calculations.
5. Introduce the concept of unsteady-state material and energy
balance in bioprocess engineering and relevant calculations.
Unit I
Units, Dimensions and Basic Chemical Calculations: Steps in a typical
Bioprocess development and the need for engineering calculations.
Introduction to engineering calculations: Physical variables, units and
dimensions - Substantial and natural variables: volume, temperature,
pressure, force, weight, density/specific gravity, specific volume, flow
rate, mole, chemical composition, heat. Measurement conventions.
Dimensional homogeneity in equations, equations without dimensional
homogeneity. Unit conversion, conversion of equations. Standard
conditions and ideal gases. (PO1-H Knowledge transfer, PO2-M
Problem analysis, PO3-M Development of solutions to engineering
problems, PO9-M Individual/Team work, PO10-M Scientific
Communication)
8 Hrs
Unit II
Presentation and Analysis of Bioprocess Data: Errors in data and
calculations: Significant figures, absolute and relative uncertainty,
propagation of errors, types of errors, statistical analysis. Presentation of
experimental data. Bioprocess data analysis - Trends, testing
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 21
mathematical models, Least-squares analysis, linear/nonlinear models.
Mathematical procedures: Trial-and-error method, graphical method,
graphical integration, log-log plots, semi-log plots, triangular plots.
General procedures for plotting data. Bioprocess flow diagrams. (PO1-H
Knowledge transfer, PO2-M Problem analysis, PO3-M Development of
solutions to engineering problems, PO9-M Individual/Team work,
PO10-M Scientific Communication)
6 Hrs
Unit III
Material balance without reaction: Basic thermodynamic concepts -
System, process, steady state and equilibrium. Law of conservation of
mass. Introduction to material (mass) balance, types of material balance
(differential & integral and total & component), concept of basis and tie
components. Guidelines for material balance calculations. Material
balance for mixing, filtration, extraction, evaporation, distillation,
membrane separation and crystallization. Material balances with recycle,
bypass, and purge streams. Unsteady-state material balance without
reaction. (PO1-H Knowledge transfer, PO2-M Problem analysis, PO3-M
Development of solutions to engineering problems, PO9-M
Individual/Team work, PO10-M Scientific Communication)
8 Hrs
Unit IV
Material balance with biochemical reaction: Stoichiometry concepts:
Limiting and excess reactants, fractional and % conversion, Yield
(fractional and %), extent of reaction and selectivity. Stoichiometry of cell
growth and product formation - Growth stoichiometry and elemental
balances, electron balances, biomass yield, product stoichiometry,
theoretical oxygen demand, maximum possible yield. Material balances
with recycle, bypass, and purge streams with reaction. Unsteady-state
material balance with biochemical reaction. (PO1-H Knowledge
transfer, PO2-M Problem analysis, PO3-M Development of solutions
to engineering problems, PO9-M Individual/Team work, PO10-M
Scientific Communication)
8 Hrs
Unit V
Energy balance: Basic energy concepts - Intensive and expensive
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 22
properties, enthalpy. General energy balance equation. Procedures of
enthalpy calculation. Enthalpy change in nonreactive processes - change
of phase, mixing and solution. Energy balance calculations without
reactions. Enthalpy change due to reaction - Heat of combustion, heat of
reaction. Heat of reaction for processes with biomass production -
thermodynamics of cell growth, heat of reaction with and without oxygen
as electron acceptor, mixed aerobic-anaerobic metabolism, heat of
reaction in different cell cultures. Energy balance equation for cell
culture. Unsteady-state energy balance with and without biochemical
reaction. (PO1-H Knowledge transfer, PO2-M Problem analysis, PO3-M
Development of solutions to engineering problems, PO9-M
Individual/Team work, PO10-M Scientific Communication)
9 Hrs
TEXT BOOKS
1 Pauline M.
Doran
Bioprocess Engineering Principles, Prentice-Hall
Inc., 2nd Edition, 2013, ISBN: 978-0-12-220851-5
2 Shuler M L,
Kargi & DeLisa
M P
Bioprocess Engineering – Basic Concepts, Prentice-
Hall Inc., Upper Saddle River, NJ, 3rd Edition, 2017,
ISBN: 978-0-13-706270-6
REFERENCE BOOKS
1 Himmelblau, D.M.
and Riggs, J.B.
Basic Principles and Calculations in Chemical
Engineering, PHI Learning Pvt. Ltd., Connaught
Circus, New Delhi, 7th Edition, 2009, ISBN: 978-
81-203-3839-5
2 Narayanan, K.V.,
Lakshmikutty, B.
Stoichiometry and Process Calculations. PHI
Learning Pvt. Ltd., Connaught Circus, New
Delhi, 1st Edition, 2011, ISBN: 978-81-203-
2992-8
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 23
Course Outcomes: After the completion of this course, students will be
able to:
1. Demonstrate the knowledge of calculations in chemistry, physics,
biology and mathematics and apply them to solve basic biochemical
engineering unit operations and processes.
(BL: L1, L2,) (PO1-L, PO9- M, PO10-M)
2. Analyze problems related to bioprocess calculations and provide
conclusions using the first principles of material and energy balance.
(BL: L1, L2, L3) (PO1-L, PO2-M, PO9-M, PO10-M)
3. Develop solutions to basic and complex bioprocess calculations
problems. (BL: L1, L2, L3) (PO1-L, PO2-M, PO3-M, PO9-M, PO10-M)
4. Communicate the solutions to bioprocess calculations problems
effectively in both oral and written form. (BL: L1 - L5) (PO1-L, PO2-M,
PO3-M, PO10-M)
5. Demonstrate the ability of identify, analyze and solve bioprocess
calculation problems individually and in a team. (BL: L1 - L5) (PO1-L,
PO2-M, PO3-M, PO9-M)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 24
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
3RBT03 3 3 2 2 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Demonstrate the knowledge of
calculations in chemistry, physics,
biology and mathematics and apply
them to solve basic biochemical
engineering unit operations and
processes
3 3
Analyze problems related to
bioprocess calculations and provide
conclusions using the first
principles of material and energy
balance
3 3 2 3
Develop solutions to basic and
complex bioprocess calculations
problems
3 3 2 3
Communicate the solutions to
bioprocess calculations problems
effectively in both oral and written
form
3 3 2 2 2
Demonstrate the ability of identify,
analyze and solve bioprocess
calculation problems individually
and in a team
3 3 2 2 2
1:Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 25
TRANSPORT PROCESSES - I
Course Objective: This course will enable students to:
1. Describe the concepts of fluid flow and rheological properties of fermentation broths.
2. Learn the basic equations involved in flow of fluid through circular pipes.
3. Learn the basic equations used in different types of flow meters like orificemeter, venturirmeter and pumps and its operation.
4. Learn various parts and flow patterns in mixing equipment. 5. Learn the various equations involved in the power calculation of
mixing equipment.
Unit I
Momentum transfer: Introduction to momentum transfer, properties of
fluids, measurement of density and specific gravity, classification of
fluids, Shear stress, Viscosity, Newtonian and Non-Newtonian fluids,
Two-parameter models, Time-dependent viscosity, Viscosity
measurements- Cone- and –Plate viscometer, Coaxial cylinder
viscometer, Impeller viscometer, Use of viscometers in fermentation
broths, Rheological properties of fermentation broths, Factors affecting
broth viscosity. Concepts of fluid flow: Types of flow, Reynold’s number
and its significance, continuity equation and applications of Bernoulli’s
equation and numerical problems. (PO1: M: Apply the knowledge of
mathematics, science, engineering fundamental) 8 Hrs
Unit II
Fluid Flow in conduits and piping system: Flow of in-compressible
Fluids in Conduits and Thin Layer: Estimation of pressure drop in
Newtonian fluids under laminar flow (Hagen Poiseulle’s equation) Friction
factor and its significance, Moody’s diagram and estimation of friction
factor. Numerical problems. Concepts of Hydrodynamic boundary layers
and Boundary layer separation. Nature of Turbulence, representation of
turbulent flow by mean and fluctuating velocities and correlations of
turbulent flow. Piping system: Definition and types of pipes, schedule
Contact Hours/Week : 3+0+0 (L+T+P) Credits : 3
Total Lecture Hours : 39 CIE Marks : 50
Course Code : 3RBT04 SEE Marks : 50
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 26
number, types of pipe fittings and their role, Types of valves and their
construction. (PO2: M: Identify and analyze complex engineering
problems reaching substantiated conclusions using first principles
of mathematics ) 8 Hrs
Unit III
Flow measuring devices: Types of pressure, introduction to pressure
gauge and pressure transducers. Measurement of fluid flow rates by
orifice meter, venturimeter, rotameter, pitot tube, wet gas flow meter and
magnetic flow meters- construction and working. Numerical problems on
venturimeter and orificemeter. Principles of flow visualisation by particle
image velocitymetri and laser doppler anemometer. Transfer of fluids by
pumps: -construction and working of centrifugal, reciprocating and
peristaltic pumps. Operating curves of centrifugal pumps. (PO2: M:
Identify, review research literature and analyze complex
engineering problems reaching substantiated conclusions using
first principles of mathematics) 7 Hrs
Unit IV
Mixing: Functions of mixing, Mixing equipment- Vessel geometry and
liquid height, Baffles, Sparger, Stirrer shaft, Flow patterns in stirred
tanks –Rotational flow, Radial flow, Axial flow, Gas flow patterns,
Impellers –Rushton turbine –with gassing, Without gassing, Propellers,
Pitched blade turbine, Alternative impeller designs-Curved blade disc
turbines, Hydrofoil impellers. (PO1: M :Apply the knowledge of science
and engineering fundamentals) 8 Hrs
Unit V
Power requirements: Ungassed Newtonian fluids, Ungassed Non-
Newtonian fluids, gassed fluids, power input by gassing, Impeller
pumping capacity, Suspension of solids, Mechanisms of mixing,
Assessing mixing effectiveness, Scale-up of mixing in fermenters,
Multiple impellers, Retrofitting, Effect of rheological properties on mixing,
Role of shear in stirred fermenters-Studies with animal cell cultures, Cell
damage from bursting bubbles.
(PO1: H : Apply the knowledge of mathematics, science, engineering
fundamentals). 8 Hrs
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 27
TEXT BOOK:
1 Pauline M. Doron
Bioprocess Engineering Principles, Elsevier, 2nd Edition, 2013, 978-0-12-220851-5
REFERENCE BOOK:
1 Coulson J. II and
Richardson J.F.
Chemical Engineering.Vol.1, Asian Books. New Delhi, Robeth LLC, 6th Edition, 1998, 818147144X
2 McCabe W L et. al.
Unit Operations of Chemical Engineering, McGraw Hill New York, Marcel Dekker Inc, 7th Edition,
1993, 0071247106
Course Outcomes: After the completion of this course, students will be
able to:
1. Apply the basic concepts of fluid and analyze flow systems based on
continuity, Bernoulli’s equations for mass and energy balances.
2. Estimate the pressure drop and friction factor of a Newtonian fluid
flowing through a circular pipe.
3. Demonstrate the knowledge on transportation of fluids, transport and
flow measuring devices with regard to principles, construction and
working.
4. Understand various parts of mixing equipment, functioning of mixing
and flow patterns in mixing.
5. Analyze the power required in mixing processes with ungassed
Newtonian and non-Newtonian fluids.
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
3RBT04 2,3 2,3 1,2
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 28
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Apply the basic concepts of fluid
and analyze flow systems based on continuity, Bernoulli’s equations for mass and energy
balances
3 1
Estimate the pressure drop and
friction factor of a Newtonian fluid flowing through a circular pipe
2 3 2
Demonstrate the knowledge on transportation of fluids, transport and flow measuring devices with
regard to principles, construction and working
2 2 2
Understand various parts of mixing equipment, functioning of mixing and flow patterns in
mixing
2 2
Analyze the power required in
mixing processes with ungassed Newtonian and non-Newtonian fluids
2 2
1: Low, 2: Moderate, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 29
GENETICS Contact Hours/Week : 3+0+0 (L+T+P) Credits : 3
Total Lecture Hours : 39 CIE Marks : 50
Course Code : 3RBT05 SEE Marks : 50
Course objectives: This course will enable students to:
1. Study the Structural and functional aspect of Eukaryotic and
prokaryotic cells.
2. Study the Structure and Function of Biological Macromolecules like
DNA and RNA and the work of Mendel.
3. Study the Principles underlying Genetic Interaction and to analyze
Genotypic and Phenotypic Variations.
4. Know about the Sex-Linked Inheritance in Humans.
5. Learn about Genetic Code and Gene Mutation: Variants, Effects.
Unit I
Introduction to cell: Eukaryotic and prokaryotic cells, Plant and animal
cells, brief mention of membrane organization. Cell structure and
function: cell division- Mitosis and Meiosis. Structure of cytoplasm,
Nucleus, Mitochondria, Ribosome, Golgi bodies, Lysosomes. Endoplasmic
Reticulum, Peroxisomes, Chloroplast and Vacuoles. Cell to cell
integration, Cell locomotion (Amoeboid, Flagella, Cilla). (P01-L:
Knowledge transfer: Knowledge of basic science)
8 Hrs
Unit II
Chromosomes: Journey from Nucleic Acid to Chromosomes, Ultra
structure of Chromosomes, Palindromic DNA and Satellite DNA. Polytene
and Lamp-Brush Chromosomes, Human Chromosome and its analysis,
aims and objectives Human Genome Project.
Genetics and Mendel concepts: Terminologies; Gene, Allele or
Allelomorph, Dominant and Recessive, Homozygote and Heterozygote,
Phenotype and Genotype, Carriers, Genetic symbols. Mendel’s work,
Mendel’s Laws, Monohybrid, Dihybrid, Trihybrid and Multi-hybrid cross,
Test cross, Backcross. Other Allelic Relationships; Co-dominant allele,
Incomplete dominance, Lethal Allele, Multiple allele. (P01-H: Knowledge
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 30
transfer: Knowledge of Mathematics, basic science to solve simple
problems) 8 Hrs
Unit III
Genetic Interactions: Two factor interaction; 1) Epistatic Interaction:
Dominant Epistasis, Recessive Epistasis, Duplicate Genes with
Cumulative Effect, Duplicative Dominant Genes, Duplicate Recessive
Genes, Dominant and Recessive Interactions. 2) Non-Epistatic
Interactions. Three or more Factor Interactions. The Genetics of Sex:
The Importance of Sex. Sex determining mechanisms: 1) Sex
Chromosome mechanism; Heterogametic males (XX-XY, XX-XO),
Heterogametic Females (ZW-ZZ, ZO-ZZ) 2) Genic Balance (Drosophila
Melanogaster) 3) Haplodiploidy 4) Single Gene effects. (P01-M:
Knowledge transfer: Knowledge of basic science).
8 Hrs
Unit IV
Sex-Linked Inheritance: Sex-linked Inheritance; The Organ of Heredity,
Chromosomes, Morphology, Classification (only X and Y chromosomes).
Chromosomal disorders. Sex Linked Inheritance: Molecular Diseases,
Hemoglobin pathies. Disorders of Coagulation, Color Blindness,
Hemophilia. Linkage and Recombination: Phases of Linkage, Linkage
Groups; Complete and Incomplete, four strand Crossing over, Detection
of Linkage. Crossing Over: Crossing Over (Essential Features, Kinds,
Mechanism), Cytological Basis of Crossing Over; Stern’s Experiment in
Drosophila, Creighton and Mc-Clintock experiment in Maize. (P01-M:
Knowledge transfer: Knowledge of basic science)
8 Hrs
Unit V
Gene mutation and population genetics: Genetic Codes and Gene
Mutation: Definition, Classification, Types of Mutagens – Chemical and
Physical Mutagens of Mutation, Mechanisms of Mutation, Base Pairing
Substitution, Frame Shift Mutation Missense Mutations, Nonsense
Mutations, Mutation in Termination Codons, Silent Mutations, Genetic
Suppression, Kinds of mutations – SNPs, jumping genes. (P01-H:
Knowledge transfer: Knowledge of basic science). Molecular Basis of
Mutation, Radiation. Gene Frequency and Equilibrium Estimation,
Changes in Gene Frequency, Genetic Structure of Population, Speciation
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 31
and Evolution, Prospects for The Control of Human Evolution. Numerical
Problems Eugenics. Pedigree Analysis (P01-M: Knowledge transfer:
Knowledge of basic science and mathematics). Case study: Sickle
cell anaemia. Polymorphism. Wright-Fisher model. (P02-L: To gather
knowledge on genetic aberrations from the open literature)
7 Hrs
TEXT BOOKS:
1. Susan Elrod,
William Stansfield.
Genetics, Schaum’s Out lines, 3rd Edition,
1991, 978-0071625036
2. Gardner, Simmons,
Snustad.
Principles of Genetics, Wiley India, 6th
Edition, 2006, 978-8126510436
3. Darnell J Lordes and H
Balitimore.
Molecular cell Biology, Scientific American
books USA, 4th Edition, 2015, 978-
0815344643
REFERENCE BOOKS:
1. Monroe W Strickberger. Genetics, Phi learning, 3rd Edition, 2008,
978-9332555105
2. P.C.Winter, G.I.Hickey
and H.L.Fletcher.
Instant notes in Genetics, Taylor and Francis
Publishers, 10th Edition,1999, 978-
0415693141
Course Outcomes: After the completion of this course, students will be able to:
1. Classify the type of cell organelles and their functions. (BL: L2)
(PO1-L)
2. Describe the Structure & Function of DNA, RNA and Explain
Mendelian Laws of Genetics. (BL: L2) (PO1-H)
3. Explain the Genetic Interaction, Analyse Genotypic & phenotypic
Variations. (BL: L2, L4) (PO1-M)
4. Describe how Sex influences the Trait of an Organism. (BL: L2)
(PO1-M)
5. Distinguish the Features of Genetic Code and Analyse the
Mutations in Genes and gene population. (BL: L2, L4) (PO1-H,M,
PO2-L)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 32
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
3RBT05 2 1 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program
specific outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Classify the type of cell organelles and their functions.
1 2
Describe the Structure &
Function of DNA, RNA and Explain Mendelian Laws of
Genetics.
3 2
Explain the Genetic Interaction,
Analyze Genotypic & phenotypic Variations.
2 2
Describe how Sex influences the Trait of an Organism.
2 2
Distinguish the Features of
Genetic Code and Analyze the Mutations in Genes and gene
population.
1 1 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 33
MICROBIOLOGY LABORATORY
Lab Hours/ Week : 0+0+3 (L+T+P) Credits : 1.5
Course Code : 3RBTL01 CIE Marks : 50
SEE Marks : 50
Course objectives: This course will enable students to: 1. Expertise one with basic strategies of isolation, culturing and
preservation of microorganisms.
2. Make proficient enough with basic staining of microorganism to
know the kind of microbes.
3. Get well acquainted with handling of essential instruments used in
a microbiology lab; face and solve the trouble shoots.
4. Understand manual and automated enumeration techniques of
soil, water and air microorganisms.
5. Acquire ability to identify the potability of different daily essential
consumables.
List of Experiments:
1. Introduction: a. Aseptic techniques – Hot air oven,
Autoclave,membrane filter, Laminar airflow, Incubator. b.Cleaning of glassware’s.
2. Media preparation – a. Broth and Agar b. Instrumentation, Handling
and care of Microscope.
3. Isolation of microorganism from soil sample by serial dilution method
(Morphology - Bacteria, fungi, yeast - Mounting and identification.)
Pour plate method, B. Streak plate method, C. Spread plate method.
4. Isolation of microorganism from rotten fruits and vegetables by serial
dilution method. (Morphology - Bacteria, fungi, yeast - Mounting and
identification)
5. Examination of microorganisms from tooth scrapings. (PO1-L Knowledge transfer: Knowledge of basic techniques in
microbiology, PO4-M Investigation methodology, analyses of
data considering sources of error and draws valid conclusions,
PO6-L Imbibing professional engineering practices, PO8-M
professional ethics and responsibilities)
6. a. Gram staining of bacteria.
b. Measurement of size of cells by Micrometry.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 34
7. a. Enumeration of total count. (haemocytometer)
b. Motility of Bacteria by hanging drop technique.
(PO1-M Knowledge transfer: Knowledge of basic techniques in
microbiology, PO5-L Modern tool usage)
8. Growth curve of bacteria by turbidometry.
9. Effect of temperature and PH on growth of bacteria.
10. Biochemical test: Catalase test, Starch Hydrolysis, Gelatin
liquefaction,
proteolytic activity.
11. Biochemical test: Carbohydrate fermentation test and IMViC Test.
12. Antibiotic susceptibility testing of bacteria and antagonism test
between fungi and bacteria.
13. Lysis of bacteria by phage, plaque counting.
14. Measurement of fungal growth by linear determination.
(P01-H: Knowledge transfer: Knowledge of basic science, PO9-L
Individual and team work).
15. Bacteriological examination of water by multiple tube fermentation
tests.
(P01-H: Knowledge transfer: Knowledge of basic science, PO6-M
knowledge to assess societal and health issues).
TEXT BOOKS:
1 Cappuccino J G
and Sherman
Microbiology, A Laboratory Manual, Benjamin /
Cummings Publishing Company Inc, 10th
Edition, 1996, 978-1355992486
2 Benson H J. Microbiological Applications- (A Laboratory
manual in General Microbiology), McGraw Hill,
Boston, 8th Edition, 2002, 978-1259919794
3 Aneja R K. Experiments in Microbiology, Plant Pathology, &
Biotechnology, New Age International Publisher,
5th Edition, 1957, 978-0967377360
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 35
Course Outcomes: After the completion of this course, students will be able
to:
1. Describe and enumerate practical skills for isolation of different types
of microorganisms and identify them. Preparation of different types of
media in broth and solid form. (BL: L1, L2) (PO1-L, PO4-M, PO6-L,
PO8-M, PSO3-L)
2. Demonstrate the procedures pertaining staining of microbes,
identification and its movement. (BL: L1, L2) (PO1-M, PO5-L, PSO1-M,
PSO3-M)
3. Apply analytical equipment for enumeration of total count of microbes
from different samples and calculate the load of microorganisms
present in different samples. (BL: L1, L2) (PO1-H, PO5-L, PSO3)
4. Formulate media for production of bioactive molecules based on the
nature of growth of microorganism. (BL: L2, L3) (PO1-H, PO9-L, PSO1-
M, PSO3-M)
5. Interpret and analyse the potability of drinking water, food samples
from different sources etc. (BL: L2, L3) (PO1-H, PO6-M, PSO1-M, PSO3-
M)
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
3RBTL01 2 1 1 1 1 1 1 1
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 36
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Describe and enumerate practical skills for isolation of different types of microorganisms and identify them. Preparation of different types of media in broth and solid form.
1 2 1 2
l l
Demonstrate the procedures pertaining staining of microbes, identification and its movement
2 1
Apply analytical equipments for enumeration of total count of microbes from different samples and calculate the load of microorganisms present in different samples.
3 1
Formulate media for production of bioactive molecules based on the nature of growth of microorganism
3 1
Interpret and analyze the potability of drinking water, food samples from different sources etc
3 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 37
BIOCHEMISTRY LABORATORY
Lab Hours/
Week
: 0+0+3 (L+T+P) Credits: 1.5
Course Code : 3RBTL02 CIE Marks: 50
SEE Marks: 50
Course Objectives: This course will enable students to: 1. Understand fundamental approaches in preparing various
solutions of different concentration.
2. Enhance the practical approaches in estimation of biomolecules
like carbohydrates, proteins and lipids.
3. Apply the concepts of biochemical methods of investigating samples
in realistic situations.
4. Apply the biochemical methods to understand the properties of
phenolic compounds.
5. Apply the biochemical methods to understand the properties of
hydrogen peroxide.
List of experiments:
Demonstration: Calibration of pH meter, Measurement of pH of the
solution, spectrophotometer, concentration of solutions (Normality,
Molarity and Molality), preparation of buffers of constant strength.
1) Titration curve of amino acids.
2) Qualitative tests for carbohydrates.
3) Qualitative tests for proteins.
4) Qualitative tests for lipids.
(P01-L: Knowledge transfer: Knowledge of basic science PO2-L: To
gather knowledge on biomolecules and applying the knowledge in
identifying the type of biomolecule in unknown solution).
5) Estimation of blood sugar by O-Toluidine method.
6) Estimation of blood sugar by Folin-Wu method.
7) Determination of total carbohydrate by anthrone method.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 38
(P01-L: Knowledge transfer: Knowledge of basic science PO2-L: To
gather knowledge on carbohydrates and applying the knowledge in
identifying the carbohydrates by various methods).
8) Estimation of inorganic phosphate by Fiske-Subbarao method.
9) Estimation of protein by Bradford’s method and Lowry’s method.
10) Determination of iodine value of lipid.
(P01-L: Knowledge transfer: Knowledge of basic science PO2-L: To
gather knowledge and use of appropriate method to differentiate).
11) Determination of saponification value of lipid.
12) Estimation of urea by diacetylmonoxime method.
13) Estimation of iron from haemoglobin.
(P01-L: Knowledge transfer: Knowledge of basic science PO2-L: To
gather knowledge and use of appropriate method to differentiate).
14) Estimation of total phenolic compounds.
15) Estimation of H2O2 using silver nano particles.
(P01-M: Knowledge transfer: Knowledge of basic science).
TEXT BOOKS:
1 David T Plummer Introduction to Practical Biochemistry, McGraw
Hill Education, 3rd Edition, 2017,
9780070994874
2 Sadashivam, S.
Manikkam, A.
An Introduction to Biochemical Methods, New Age
International Publishers, 3rd Edition, 2007, 978-
0121825546
REFERENCE BOOK:
1 Pattabhiraman,
T.N.
Lab manual in Biochemistry, All India Pub & Dist,
4th Edition, 2007, 978-1305968554
Course Outcomes: After the completion of this course, students will be
able to:
1. Classify and differentiate the biological molecules like proteins,
carbohydrates and proteins by quantitative estimation. (BL: L2, L3)
(PO1-L, PO2-L, PSO1-M, PSO3-L)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 39
2. Identify and interpret the sugar content in the solution by various
methods. (BL: L2, L3)(PO1-L, PO2-L, PSO1-M, PSO3-L)
3. Describe and interpret the methods of protein, iodine and inorganic
phosphate estimation. (BL: L2, L3)(PO1-L, PO2-L, PSO1-M, PSO3-L)
4. Analyze and interpret the methods of lipids, iron and urea
estimation. (BL: L2, L3)(PO1-L, PO2-L, PSO1-M, PSO3-L)
5. Explain the methods of phenolic and hydrogen peroxide estimation.
(BL: L2) (PO1-M, PSO1-M, PSO3-L)
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
3RBTL02 1 1 2 1
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Classify and differentiate the biological molecules like proteins, carbohydrates and proteins by quantitative estimation.
1 1 2 1
Identify and interpret the sugar content in the solution by various methods.
1 1 2 1
Describe and interpret the methods of
protein, iodine and inorganic phosphate
estimation.
1 1 2 1
Analyze and interpret the methods of
lipids, iron and urea estimation 1 1 2 1
Explain the methods of phenolic and hydrogen peroxide estimation.
2 2 1
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 40
CONSTITUTION OF INDIA AND PROFESSIONAL ETHICS
Contact Hours/Week : 2+0+0 (L+T+P) Credits : 0
Total Lecture Hours : 26 CIE Marks : 50
Course Code : HSS04 SEE Marks : 50
Course outcomes: This course will enable students to:
1. To orient students on the salient features of the Indian Constitution with special emphasis on fundamental rights and duties.
2. To provide an overview of the Union and State legislature, executive and judiciary.
3. To explain the importance of electoral process and help students appreciate the ethical practices in elections.
4. To facilitate the students to have a clear perspective of the Ethical values and their relevance in the present context of globalization.
5. To enable the students familiarize themselves with the ethical values proposed and practiced by the great leaders / eminent personalities with particular reference to Sir M. Visvesvaraya.
Part I: Constitution of India
Unit I
Introduction to Constitution of India: Salient Features of Indian
Constitution, Preamble to the Indian Constitution, Different kinds of fundamental rights, Directive Principles of State Policy, Categorical study of Directive Principles, Relationship between DPSP and Fundamental Rights, Fundamental Duties. 6 Hrs
Unit II
Union and State Governments: Union and State Legislature:
Composition and powers of Loksabha, Rajyasabha, Legislative Assembly and Legislative Council. Union and State Executive: The appointment and powers of President, Vice-president, Prime-Minister, Union Council of Ministers, Governor of State, Chief Minister of State and State Council of Ministers. Union and State Judiciary: The Composition and powers of
Supreme Court and High Court. 7 Hrs
Unit III
Other Provisions of Constitution: Special provisions relating to SC / ST, Women and Children and other backward classes. Electoral process related to the Election Commission of India: Composition, functioning and removal of the Election Commissioner(s).
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 41
Human Rights: Meaning, Kinds and Safeguard of Human Rights, State
Human Rights Commission and National Human Rights Commission. 5 Hrs
Part II -Professional Ethics
Unit IV
Professional Ethics and Human Values: Introduction, What is Ethics, Scope of Professional Ethics, Values and Characteristics, Types of values: Negative and positive values, Ethical values for Professional success. Case Studies: Ethical practices of the reputed Indian Companies: TATA Group, Wipro Technologies. 4 Hrs
Unit V
Professional Code of Conduct: Introduction, Professional Code, Legal System, Ethical and Unethical practices, Making the Professional Code successful. Ethical values of Sir M. Visvesvaraya, Mahatma Gandhi and Swami Vivekananda. 4 Hrs
TEXT BOOKS:
J N Pandey Constitutional Law of India, Central Law Agency
Publishing, 49th Edition, 2016, 978-9384852412
S G Hunderker (Ed.) Business Ethics and Human Values, Excel Books,
New Delhi, 48th Edition, 2009, 978-8174467386
REFERENCE BOOKS:
M.V. Pylee Constitution of India, Vikas Publishing House,
New Delhi, 5th Edition, 2014, 978-8125913757
D.D. Basu Shorter Constitution of India, Lexis Nexis, 2nd
Edition, 2015, 978-9357434467
D.D. Basu Commentary on the Indian Constitution (Vol. 10),
Butter worth’s, Wadhwa Nagar, Nagpur, 2016, 978-9350356661
OC Fcrrell, John
Paul Fraedrich,
Linda Ferrell
Business Ethics: Ethical Decision Making and
Cases, Biztantra, New Delhi, 2014, 978-
1285423715
Swami Vivekananda My India: The India Eternal – Ramakrishna
Mission Institute of Culture, Kolkata, 1993, 978-
9350356661
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 42
IV Semester Syllabus
2020-21
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 43
Sid
dagan
ga I
nst
itute
of
Tech
nolo
gy, T
um
akuru
D
epart
ment
of
Bio
tech
nolo
gy
SC
HE
ME
OF
TE
AC
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G A
ND
EX
AM
INA
TIO
N E
FF
EC
TIV
E F
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020
-21
IV S
em
est
er
Sl.
No.
C
ours
e C
ours
e
Cod
e C
ours
e T
itle
T
each
ing
Dep
artm
ent
Tea
chin
g h
rs. /
wee
k
Exa
min
atio
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Cre
dit
s T
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ry
Lec
ture
Tu
tori
al P
ract
ical
/dra
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tion
in h
rs.
SE
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mar
ks
CE
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mar
ks
Tot
al
mar
ks
1 P
C-6
4R
BT
01
Mol
ecul
ar B
iolo
gy
BT
4
--
--
3 50
50
10
0 4
2 P
C-7
4R
BT
02
Gen
etic
Eng
inee
ring
B
T
4 --
--
3
50
50
100
4
3 P
C-8
4R
BT
03
Bio
stat
isti
cs a
nd
Bio
mod
elli
ng
Mat
hem
atic
s 3
1 --
3
50
50
100
3.5
4 P
C-9
4R
BT
04
Bio
logi
cal
The
rmod
ynam
ics
CH
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T
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--
3 50
50
10
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5
5 P
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CC
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Inst
rum
enta
l
met
hods
of
anal
ysis
C
H/B
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3 --
--
3
50
50
100
3
6 P
C-1
1 4R
BT
05
Tra
nspo
rt
Pro
cess
es-I
I C
HE
/BT
3
--
--
3 50
50
10
0 3
7 P
CL
-3
4RB
TL
01
Mol
ecul
ar B
iolo
gy
Lab
orat
ory
BT
--
--
3
3 50
50
10
0 1.
5
8 P
CL
-4
4RB
TL
02
Tra
nspo
rt
Pro
cess
es
Lab
orat
ory
CH
E/B
T
--
--
3 3
50
50
100
1.5
9 H
SS
H
SS
05
Env
iron
men
tal
Sci
ence
Civ
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ng. /
HS
S
2 --
--
3
50
50
100
0
Tot
al
24
2 6
27
450
450
900
24
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 44
MOLECULAR BIOLOGY
Contact Hours/Week : 4+0+0 (L+T+P) Credits : 4
Total Lecture Hours : 52 CIE Marks : 50
Course Code : 4RBT01 SEE Marks : 50
Course objectives: This course will enable students to:
1. Study the principles of central dogma of molecular biology and
molecular nature of chromosome. To understand the concept of gene
replication.
2. Study the transcription mechanisms in prokaryotes and eukaryotes.
3. Study the translation mechanisms in prokaryotes and eukaryotes.
4. Study gene regulation and expression in prokaryotes and
bacteriophages.
5. Study the genetic recombination and gene mapping.
Unit I
Introduction: Chromosomal theory of heredity - by W S Sutton and
T.Boveri, Information flow in biological systems: Central dogma and its
reversal, RNA self-replication, updated central dogma (Retroviruses).
Replication:
Introduction, Replication of DNA - General features, semi-conservative
DNA replication in E.coli, mechanism of DNA replication, Meselson and
Stahl’s experiment. Mechanism of DNA replication in Eukaryotes -
Eukaryotic DNA replication, multiple replication forks, initiation,
elongation & termination, Replication of chromatin. Replication of
telomeres, Models of replication in – Rolling circle model, Cairn’s model
and Yoshikawa model. Enzymes of DNA replication, Differences in
prokaryotic and eukaryotic DNA replication.
DNA damage and repair: Introduction& types of damage; DNA repair –
introduction, types- Photo reactivation, mismatch repair, excision repair,
recombination repair & SOS repair and recombination, mutagenic
repairs system, genetic control of DNA repair. (P01-L: Knowledge
transfer: Knowledge of basic science)
12 Hrs
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 45
Unit II
Transcription: Introduction. Concept of sense and antisense strands.
Structure and function of bacterial RNA polymerase, sigma factor cycle.
Transcription in Prokaryotes - initiation, elongation, termination (rho
dependent and rho independent) Transcription in Eukaryotes.
Eukaryotic RNA Polymerases-I, II and III functions & their promoters.
Steps in transcription-initiation, elongation & termination (Pol II only),
Difference in prokaryotic and eukaryotic transcription, Transcription
factors, Post-transcriptional modification of mRNA-capping,
polyadenylation, splicing- excision of introns &splicing of exons (All three
methods). Alternative splicing. Transcription inhibitors. (P01-L:
Knowledge transfer: Knowledge of basic science)
10 Hrs
Unit III
Translation: Introduction, definition, steps-activation of amino acid,
Initiation, elongation & termination (Prokaryotes) Protein synthesis in
eukaryotes - Initiation, elongation and termination Differences in pro- &
eukaryotic protein synthesis. Protein targeting and structure of Gene: Protein targeting, Protein
splicing, post-translational modification of proteins (acetylation,
phosphorylation) Inhibitors of translation. (P01-L: Knowledge transfer:
Knowledge of basic science)
10 Hrs
Unit IV
Concept of gene regulation:
Gene regulation and expression in prokaryotes and bacteriophages; types
in prokaryotes & eukaryotes; positive versus negative regulation.
Induction and repression system.
Fine structure of Gene: Structure and regulation of gene expression,
Operon model – Lac Operon- positive regulation and negative regulation,
mutations in lac operon, Trp-Operon - by an allosteric repressor protein
and by an attenuator and Gal operon. (P01-M: Knowledge transfer:
Knowledge of basic science) 10 Hrs
Unit V
Genetic recombination and gene mapping: Genetic recombination in
bacteria and viruses – transformation, conjugation, transduction
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 46
(Generalized and specialized), transposons and insertion sequences; Role
of recombination and transposition in evolution; gene mapping techniques. (P01-L: Knowledge transfer: Knowledge of basic science)
10 Hrs
TEXT BOOKS:
1 Freifelder Molecular Biology, Narosa Publications, 2 Edition,
2005, 978-9350356675
2 David
Freifelder
Freifelder’s Essentials of Molecular Biology, Narosa
Publications, 4th Edition, 2009, 978-9350346624
REFERENCE BOOKS:
1 Darnell J Lodish & H
Balitimore.
Molecular cell Biology, Scientific American
books, USA, 4th Edition, 2015, 923-
9352546322
2 Gardener,Simmons,
Snustad.
Principles of Genetics, Wiley publishers,
8th Edition, 2005, 932-9352366314
3 Benjamin Lewin Genes IV, Oxford university press, 4th
revised Edition,1990, 912-8952366323
Course Outcomes: After the completion of this course, students will be able to:
1. Explain the process of DNA replication, damage and repair
mechanism in prokaryotes and eukaryotes. (BL: L1) (PO1-L, PSO1-
L)
2. Describe the process of transcription in prokaryotes & eukaryotes.
(BL: L1,) (PO1-L)
3. Discuss the process of translation in prokaryotes & eukaryotes.
(BL: L1) (PO1-L)
4. Explain the concepts of gene regulation & expression. (BL: L2)
(PO1-L)
5. Illustrate the process of genetic recombination and gene mapping.
(BL: L1, L2) (PO1-L)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 47
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
4RBT01 1 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Explain the process of DNA replication, damage and repair mechanism in prokaryotes and eukaryotes
1 2
Describe the process of transcription in prokaryotes & eukaryotes
1 2
Discuss the process of translation in
prokaryotes & eukaryotes 1 2
Explain the concepts of gene regulation & expression
2 2
Illustrate the process of genetic recombination and gene mapping
1 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 48
GENETIC ENGINEERING
Contact Hours/Week : 4+0+0 (L+T+P) Credits : 4
Total Lecture Hours : 52 CIE Marks : 50
Course Code : 4RBT02 SEE Marks : 50
Course objectives: This course will enable students to: 1. Study rDNA technology, vectors and enzymes used in genetic
engineering.
2. Acquire the knowledge of specific techniques like PCR, NA
hybridization & libraries.
3. Learn about various gene transfer techniques, applications of
transgenic plants &animals and importance of gene therapy.
4. Study the various application of genetic engineering in health care
and environment.
5. Understand the important of Genetically Modified Organisms
(GMOs).
Unit I
Vectors & Enzymes in Genetic Engineering: Vectors in rDNA
technology: salient features of vectors, types of vectors. Plasmids:
Definition and classification of plasmids, Natural plasmid (ColE1) and
artificial plasmid (pBR322, PUC series), Phage vectors: ssDNA vectors
(M13) Viruses, Cosmids and Artificial Vectors (BACs, YACs). (PO1- M :
Engineering knowledge) Enzymes in Genetic Engineering:
Exonucleases and Endonucleases: classification, mode of action.
Enzymes in modification -Polynucleotide phosphorylase, DNase,
Methylases, phosphatases, polynucleotide Kinase, Ligases, RNase and
their mechanism of action.DNA of Cell Organelle. (PO1-M: Engineering
knowledge) 12 Hrs
Unit II
Nucleic acid isolation, amplification and sequencing: Isolation and
purification of nucleic acids: (DNA, RNA and plasmids), quantification
and Storage. (PO2: M: solutions based on fundamental principles)
Introduction to Primer and Probe: Definition, Preparation Probes, and its
application. Methods of nucleic acid detection: polymerase chain
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 49
reaction (PCR), variants of PCR (RT-PCR and Q-PCR) and applications.
(PO1-M: Engineering knowledge) DNA Sequencing: Definition of
Sequencing Concept, Methods: Maxam and Gilbert method and Sanger,
Automated DNA sequencing. Advantages and disadvantages. Recent
trends in DNA Sequencing. (PO2: M: solutions based on fundamental
principles). 10 Hrs
Unit III
Nucleic acid hybridization and Methods of Gene/DNA transfer:
Methods of nucleic acid hybridization: Southern, Northern & Western
hybridization techniques & applications. (PO2: M: solutions based on
fundamental principles) Gene transfer techniques: Biological
(bactofection and transduction), Chemical (Calcium phosphate, DEAE
dextran, Cationic Lipid) and mechanical (Electroporation, Microinjection,
gene gun, Sonoporation, Laser induced and Bead transfection). (PO5-L:
Modern tool usage), (PO8-M: Apply ethical principles) Agrobacterium-
mediated gene transfer in plants – Ti & RI plasmids: structure and
functions, Ti plasmid based vectors - advantages, disease control of
Agrobacterium tumefaciens. Chloroplast transformation & its
applications (PO1-M : Engineering knowledge)
10 Hrs
Unit IV
Transgenic science in genetic improvement: Transgenic science in
plant improvement, biopharming - plants as bioreactors, transgenic
crops for increased yield, resistance to biotic and abiotic stresses.
Techniques of gene mapping in plants. Marker-assisted selection and
breeding for improvement. Transgenic science for animal improvement,
biopharming -animals as bioreactors for recombinant proteins, Gene
mapping in farm animals. Marker-assisted selection and genetic
improvement of livestock. (PO2: M: solutions based on fundamental
principles) (PO8-M: Apply ethical principles)
10 Hrs
Unit V
Applications and advance genome editing: Microbial biotechnology –
Genetic manipulation, Methods: engineering microbes for the production
of antibiotics, enzymes, Insulin, growth hormones, clearing oil spills.
Gene Therapy: Introduction, methods of Gene therapy (Ex Vivo and
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 50
Invivo), Genome editing- (Zinc finger nucleases (ZFNs), CRISPR
technology: Recent trends in CRISPR. (PO2: M: solutions based on
fundamental principles) (PO5-L: Modern tool usage) (PO8-M: Apply
ethical principles)
10 Hrs
TEXT BOOKS:
1 Desmond S. T. Nicholl An Introduction to Genetic
Engineering, University Press, 3rd
Edition, 2008, 978-0521615211
2 T.A. Brown Gene Cloning and DNA Analysis - An
Introduction, Wiley-Blackwell Science,
6th Edition, 2010, 978-1119072560
REFERENCE BOOKS:
1 Glick, B R, Pasternak J.
J
Molecular Biotechnology: Principles
and Applications of Recombinant DNA
by, DC ASM Press, 3rd Edition, 2003,
978-1555814984
2 Brown T. A. Gene Cloning & DNA Analysis: An
Introduction, Blackwell Science, 5th
Edition, 2006, 978-1119072560
Course Outcomes: After the completion of this course, students will be able to:
1. Classify and compare the various types of vector and enzymes in
Genetic Engineering. (BL: L2) (PO1-M)
2. Identify and differentiate the techniques to isolation, amplify and
sequencing. (BL: L2) (PO1-M, PO2-M)
3. Distinguish various hybridization techniques and gene transfer
methods. (BL: L3) (PO1-M, PO2-M, PO5-L, PO8-M)
4. Outline the various methods of producing transgenic organisms in
genetic improvement. (BL: L3) (PO2-M, PO8-M)
5. Describe the applications of genetic engineering for the welfare of
mankind & society. (BL: L2) (PO2-M, PO5-L, PO8-M)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 51
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
4RBT02 2 2 1 2 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Classify and compare the various types of vector and enzymes in Genetic Engineering.
2 2
Identify and differentiate the techniques to isolation, amplify and sequencing.
2 2 2
Distinguish various hybridization techniques and gene transfer methods.
2 2 1 2 2
Outline the various methods of producing transgenic organisms in genetic improvement.
2 2 2
Describe the applications of genetic engineering for the welfare of mankind & society.
2 1 2 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 52
BIOSTATISTICS AND BIOMODELING
Contact Hours/Week : 3+1+0 (L+T+P) Credits : 3.5
Total Lecture Hours : 39 CIE Marks : 50
Total Tutorial Hours : 13 SEE Marks : 50
Course Code : 4RBT03
Course objectives: This course will enable students to:
1. Study the scope of Annova.
2. Learn the laws & principles of probability distribution.
3. Understand the significance of statistical inference in biological
experiments.
4. Learn the design of experiments.
5. Study the biomodelling of microbial growth in a chemostat, growth
equations of microbial populations, models for inheritance.
Unit I
Analysis of variance: Introduction, Assumption in the Analysis of
variance, Technique of Analysis of variance, the basic Principal of
ANOVA, Analysis of variance is One-way classification, Analysis of
variance is Two-way classification.
(PO1-M: Knowledge transfer to solve simple engineering problems)
8+3 Hrs
Unit II
Bi-variate distribution: Correlation and regression analysis (simple and
linear) curve fitting (linear, non-linear and exponential). Standard
deviation and standard error concepts and problems.
(PO1-M: Knowledge transfer to solve simple engineering problems)
Probability
Axioms, models, conditional probability, Bayes rule, Genetic Applications
of Probability, Hardy - Weinberg law, Wahlund's Principle, Forensic
probability determination, Likelihood of paternity, Estimation of
probabilities for multilocus/ multi-allele finger print systems. P- value
and Q-value.
(PO1-M: Knowledge transfer to solve simple engineering problems)
8+3 Hrs
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 53
Unit III
Statistical inference: Estimation theory and testing of hypothesis, point
estimation, interval estimation, sample size determination, simultaneous
confidence intervals, parametric and non-parametric distributions (T-
test, F-test, Chi Squared distribution, goodness of fit test) analysis of
variance (one-way and two-way classifications). Case studies of statistical
designs of biological experiments (RCBD, RBD).
(PO1-M: Knowledge transfer to solve simple engineering problems)
9+2 Hrs
Unit IV
Probability distributions: Discrete probability distributions - Binomial,
Poisson, geometric – derivations. Central limit theorem. Continuous
probability distribution – normal, exponential, gamma distributions, beta
and Weibull distributions, T & F distributions.
Design of experiments:
Sample surveys, comparisons groups and randomization, random
assignments, single- and double-blind experiments, blocking and
extraneous variables, limitations of experiments.
(PO1-M: Knowledge transfer to solve simple engineering problems)
7+2 Hrs
Unit V
Case studies: Cigarette smoking, Lung cancer, endangered plants
species, epidemics.
Biomodeling:
Microbial Growth in a Chemo stat, Growth Equations of Microbial
populations, Models of Commensalisms, Mutualism, Predation and
Mutation. Volterra’s Model for n Interacting Species. Basic Models for
Inheritance, Selection and Mutation Models, Genetic Inbreeding Models.
(PO2-M: Identifies all relevant constraints and requirements and
formulates ac accurate description of the problem)
7+3 Hrs
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 54
TEXT BOOKS:
Marcello Pagano &
Kimberlee Gauvreu
“Principles of Biostatistics”, Thompson
Learning, 2nd Edition, 2000, 978-1451130171
Ronald N Forthofer
and Eun Sul Lee
“Introduction to Biostatistics”, Academic Press,
1st Edition, 1996, 965-1251130174
Norman T J Bailey “Statistical methods in Biology”, Cambridge
University Press, 3rd Edition, 1995, 934-
6551130578
J.N.Kapur “Mathematical Models in Biology and Medicine”,
Oscar Publication, 3rd Edition 2010, 978-
8185336824
H Bancroft, J. Ispen
and P Feigl
“Introduction to Biostatistics”, Harper & Row,
New York,2nd Edition, 1970, 932-1551130556
Dutta, Animesh, K “Basic Biostatistics & its Applications”, New
Central Book Agency, 1st Edition, 2007, 956-
1951130578
REFERENCE BOOKS:
S I Rubinow “Introduction to Mathematical Biology”, Wiley
Publishers, 1st Edition, 1975, 8480522565
P.S.S. Sundar Rao
and J.Richard
“An Introduction to Biostatistics”, Prentice Hall of
India Pvt Ltd, 5th Edition, 2006, 8280522556
Miller, Freund’s and
Richard A Johnson
“Probability and Statistics for Engineers”, Chegg
Publishers, 8th Edition, 2011, 8580522578
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 55
Veer Bala Rastogi “Fundamentals of Biostatistics”, ANE Books
India, 2009, 3rd Edition, 8180522555
Course Outcomes: After the completion of this course, students will be able to:
1. Explain the concepts of Annova. (BL:L2) (PO1-M)
2. Describe different laws of probability. (BL:L2) (PO1-M)
3. Apply concepts of analysis of variance in inferring the statistical
data. (BL:L3) (PO1-M)
4. Apply different methods in design of experiments. (BL:L3) (PO1-M)
(PO1-M)
5. Outline the case studies of lung cancer, endangered plants species.
(L1) (PO2-M)
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
4RBT03 2 2 2 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Explain the concepts of Annova 2 2
Describe different laws of probability 2 1 1
Apply concepts of analysis of variance in
inferring the statistical data 2 1 1
Apply different methods in design of experiments
2 2 2
Outline the case studies of lung cancer, endangered plants species
2 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 56
BIOLOGICAL THERMODYNAMICS Contact Hours/Week : 3+1+0 (L+T+P) Credits : 3.5
Total Lecture Hours : 39 CIE Marks : 50
Total Tutorial Hours : 13 SEE Marks : 50
Course Code : 4RBT04
Course Objectives: This course will enable students to:
1. Study Measurement of various types of energies and enthalpy.
2. Learn entropies of second law and third law of thermodynamics.
3. Understand the variation of Gibbs free energy and stability of
nucleic acids and proteins.
4. Know response of equilibria in presence of catalyst and
temperature.
5. Study the thermodynamics of ion and electron transport.
Unit I
The First Law: Systems and surroundings, work and heat, measurement of work, measurement of heat, internal energy, enthalpy, enthalpy changes accompanying physical processes, bond enthalpy,
thermochemical properties of fuels, combination of reaction enthalpies, standard enthalpies of formation, enthalpies of formation and computational chemistry, variation of reaction enthalpy with temperature. (PO1-M, Knowledge of mathematics & Engineering
fundamentals) 8+3 Hrs
Unit II
The Second Law: The direction of spontaneous change, entropy and the second law, absolute entropies and the third law of thermodynamics, entropy changes accompanying chemical reactions, Gibbs free energy,
hydrophobic interaction, work and the Gibbs free energy change. (PO1-M,
Knowledge of mathematics & Engineering fundamentals) 7+3 Hrs
Unit III
Phase Equilibria: The condition of stability, the variation of Gibbs free energy with pressure, the variation of Gibbs free energy with temperature, phase diagrams, the stability of nucleic acids and proteins,
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 57
phase transitions of biological membranes, the chemical potential, ideal
and ideal–dilute solutions, the modification of boiling and freezing points, osmosis. (PO1-M, Knowledge of mathematics, Sciences &
Engineering fundamentals)
8+3 Hrs
Unit IV
Chemical Equilibrium: The reaction Gibbs free energy, the variation of
reaction Gibbs free energy with composition, reactions at equilibrium,
the standard reaction Gibbs free energy, the response of equilibria to the
presence of a catalyst, the effect of temperature on equilibria, Brønsted–
Lowry theory, protonation and deprotonation, polyprotic acids,
amphiprotic systems, buffer solutions. (PO1-M, Knowledge of
mathematics, Sciences & Engineering fundamentals)
8+2 Hrs
Unit V
Thermodynamics of Ion and Electron Transport: Ions in solution,
passive and active transport of ions across biological membranes, ion
channels and ion pumps, half-reactions, reactions in electrochemical
cells, the Nernst equation, standard potentials, applications of standard
potentials - the determination of thermodynamic functions, the
electrochemical series, the respiratory chain, and plant photosynthesis.
(PO1-M, Knowledge of mathematics, Sciences & Engineering
fundamentals)
8+2 Hrs
TEXT BOOKS:
Atkins P. and de
Paula J. Physical Chemistry of the Life Sciences, W.H
freeman and Company, New York, 2nd Edition,
2011, 978-1-4292-3114-5
REFERENCE BOOKS:
Hammes G.G and
Hammes-Schiffer S. Physical Chemistry for the Biological Sciences,
John Wiley & Sons, Inc., Hoboken, New
Jersey, 2 Edition, 2015, 978-1-118-85900-1
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 58
Allen J.P. Biophysical Chemistry, Wiley-Blackwell,
Chichester, West Sussex, UK, 3 Edition, 2008,
978-1-4051-2436-2
Course Outcomes: After the completion of this course, students will be able to:
1. Discuss the various types of enthalpy and energy accountable in
First law of Thermodynamics and its measurement. (BL: L2) (PO1-
M)
2. Calculate the entropy changes and Gibbs free energy in chemical
reactions. (BL: L3) (PO1-M)
3. Determine the stability of nucleic acids and proteins, chemical
potential of biological systems. Explain conditions of stability and
the modification of boiling and freezing points & osmosis. (BL: L2,
L4) (PO1-M)
4. Explain the effect of temperature on equilibria and Bronsted–Lowry
theory. And also Evaluate the standard Gibbs free energy for
reactions. (BL: L5, L6) (PO1-M)
5. Discuss the Ions transport in solution, across biological
membranes, ion channels and ion pumps. And also determine
standard potentials thermodynamic functions. (BL: L2, L4) (PO1-M)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 59
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
4RBT04 2 2 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Discuss the various types of enthalpy and energy accountable in First law of Thermodynamics and its measurement
2 2
Calculate the entropy changes and Gibbs free energy in chemical reactions
2 2
Determine the stability of nucleic acids and proteins, chemical potential of biological systems. Explain conditions of stability and the modification of boiling and freezing points & osmosis
2 2
Explain the effect of temperature on equilibria and Brønsted–Lowry theory. And also Evaluate the standard Gibbs free energy for reactions
2 2
Discuss the Ions transport in solution, across biological membranes, ion channels and ion pumps. And also
determine standard potentials thermodynamic functions
2 2 3
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 60
INSTRUMENTAL METHODS OF ANALYSIS
Contact Hours/Week : 3+0+0 (L+T+P) Credits : 3
Total Lecture Hours : 39 CIE Marks : 50
Course Code : 4RCCB1 SEE Marks : 50
Course Objectives: This course will enable students to: 1. Understand the basic concepts, principles of chromatographic
separations and operation of modern chromatographic
instrumentation.
2. Understand the basic principles of electronic spectroscopic
techniques and explain the terminology of UV/Vis spectroscopies.
Examine UV spectra based on the knowledge of different electron
transitions.
3. Know the theory of IR absorption, types of vibrations, factors
affecting the group frequencies and sample handling techniques. To
analyze IR spectra based on knowledge of characteristic functional
group frequencies.
4. Demonstrate the knowledge of the chemical shifts and coupling
constants in NMR to study 1H NMR spectra and propose structures
for compounds.
5. Understand about characterization techniques such as XRD and
electron microscopy which interpret crystal structure and
morphology.
Unit I
Chromatography: Introduction to Chromatography - Classification -
Theory - terminologies- distribution coefficient, retention time, corrected
retention time, retention volume, corrected retention volume, retention
factor, selectivity factor, column capacity, separation number, peak
capacity, column efficiency, resolution and optimization of column
performance. Types of chromatography- adsorption, partition, ion
exchange and size exclusion chromatography. Numerical problems on
retention factor.
Thin layer chromatography: Principle, mobile phase, sample
application, development techniques evaluation and documentation,
advantages, limitations and applications.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 61
Gas chromatography:
Principle, instrumentation, carrier gas, stationary phase, sample
injection, columns, detectors (TCD, FID, ECD atomic emission detector).
Applications.
High performance liquid chromatography:
Principle, instrumentation, column, sample injection, detectors (UV,
refractive index), mobile phase selection, isocratic and solvent gradient
system. Demonstration of HPLC, Applications. (PO1-L Transfer of Basic
knowledge in Chemistry, PO4-M, Calibration and Data Analysis)
8 Hrs
Unit II
General introduction to spectroscopy: Introduction, Types of
spectroscopy-atomic and molecular spectroscopy, nature and interaction
of electromagnetic radiations with matter, energies corresponding to
various kinds of radiations, spectral band width – definition and factors
contributing spectral width, factors influencing positions and intensity of
spectral lines. (PO1-L Transfer of Basic knowledge in Chemistry)
4 Hrs
Electronic Spectroscopy: Principles of electronic spectroscopy - Types
of electronic transitions in organic molecules. Chromophores and
auxochromes. Bathochromic shift or Red shift, hypsochromic shift or
blue shift. Hyperchromic effect and hypochromic effect. Effect of solvent
and extent of conjugation on max and on the energies of n −* and −*
transitions. Instrumentation, qualitative and quantitative analysis.
(PO1-L Transfer of Basic knowledge in Chemistry)
4 Hrs
Unit III
Infrared spectroscopy: Principles of IR spectroscopy. Requirements for
IR absorption. Types of vibrations - Stretching vibrations and bending
vibrations. Fundamental modes of vibrations for linear and non linear
molecules. Characteristic group frequencies for infrared absorption of
organic molecules. Factors affecting the group frequencies – coupled
interactions (Fermi resonance, aldehyde) electronic effects (carbonyl
compounds) and hydrogen bonding (alcohols, carboxylic acids).
Numerical problems on vibrational frequencies. Instrumentation-FTIR
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 62
instrument and its advantages. Sample handling techniques – Nujol mull
and KBr pellet. (PO1-L Transfer of Basic knowledge in ChemistryPO4-
M, Data Analysis)
8 Hrs
Unit IV
Nuclear magnetic resonance spectroscopy: The nuclear spin, Larmor
precession, the NMR isotopes, energy levels for a nucleus with spin
quantum number I = ½ , 3/2 and 5/2, theory of population of nuclear spin
levels, spin-spin and spin-lattice relaxation, chemical shift – definition,
causes, measurement. TMS as a reference compound and its advantages,
factors affecting chemical shift, shielding and deshielding mechanisms,
correlation of chemical shifts with chemical environment – aliphatic,
alkenic, alkynic, aldehydic, ketonic, aromatic, alcoholic, phenolic,
carboxylic, amino protons, spin – spin coupling, spin – spin splitting,
intensity ratio of multiplet- Pascal’s triangle method, chemical exchange,
effect of deuteration, classification of spin systems (AX, AMX, AB, ABC),
first order spectra, low and high resolution spectra, determination of
peak areas, coupling constants-short and long range couplings,
Instrumentation – FT NMR. Applications of electronic spectroscopy, IR
and NMR to structural elucidation of simple organic molecules. (PO1-L
Transfer of Basic knowledge in Chemistry)
8 Hrs
Unit V
Microstructures and morphological studies: XRD: Production of X-
rays; types of X-ray sources, Selection of radiation, Braggs Equation,
Diffraction by Crystal - direction and intensity of diffracted beams,
Calculation of particle size-Debye Scherrer equation proportional,
scintillation, solid-state detectors. X-ray spectroscopy for elemental
analyses - wavelength dispersive and energy dispersive analyses. AFM –
principle and applications, Demonstration and Data analysis. (PO1-L
Transfer of Basic knowledge in Chemistry)
Microscopy:
Concept of optical microscopy, uses, advantages and disadvantages,
Electron microscopy, Introduction, Theory of electron diffraction,
Scanning electron microscopy (SEM), Demonstration and Data analysis
(PO4-M, Calibration and Data Analysis )
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 63
Transmission electron microscopy (TEM), indexing selected area electron
diffraction pattern, HRTEM analysis, Comparison of XRD and TEM
(HRTEM, SAED pattern). (PO4-M, Data Analysis) AFM – principle and
applications. 7 Hrs
TEXT BOOKS:
R.M. Silverstein and
W.P. Webster Spectrometric Identification of organic
compounds, Wiley & Sons, 8th Edition, 1999,
978-0470616376
H H Willard, L.L.
Merritt and J.A.
Dean and F.A. Settle
Instrumental Methods of Analysis, CBS
Publishers, 7th Edition, 1988, 945-0470612323
REFERENCE BOOKS:
G.W. Ewing Instrumental methods of Chemical Analysis,
McGraw-Hill, New York, 5th Edition, 1988, 912-
0470612345
Skoog, D.A, S.J.
Holler, T.A.
Nilman,
Principles of Instrumental Analysis, Saunders
college publishing, London,5th Edition, 1998, 978-
0270612378
Jaffery, Gill,
Basset. J
Vogel’s Text Book of Quantitative Inorganic analysis,
ELBS, 5th Edition, 1998, 956-0450612323
Course Outcomes: After the completion of this course, students will be able to:
1. Describe the chromatographic techniques for the identification and
purification of compounds. (BL: L2) (PO1-L, PO4-M)
2. Explain the principles and methods of different spectroscopic
techniques. (BL: L2) (PO1-L)
3. Discuss the theory of IR absorption, types of vibrations and analyse
IR spectra. (BL: L2) (PO1-L, PO4-M)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 64
4. Interpret and perform NMR spectra analysis for the identification of
unknown organic molecules. (BL: L2) (PO1-L)
5. Explain the characterization techniques: XRD and electron
microscopy which interpret crystal structure and morphology. (BL:
L2) (PO1-L, PO4-M)
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
4RCCB1 1 2 2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Describe the chromatographic techniques for the identification and purification of compounds
1 2 2
Explain the principles and methods of different spectroscopic techniques
1 2
Discuss the theory of IR absorption, types of vibrations and analyse IR spectra
1 2 2
Interpret and perform NMR spectra analysis for the identification of unknown organic molecules.
1 2
Explain the characterization techniques: XRD and electron microscopy which interpret crystal
structure and morphology.
1 2
2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 65
TRANSPORT PROCESSES - II Contact Hours/Week : 3+0+0 (L+T+P) Credits : 3
Total Lecture Hours : 39 CIE Marks : 50
Course Code : 4RBT05 SEE Marks : 50
Course Objectives: This course will enable students to:
1. Understand the basic concepts of conduction, and critical
thickness of insulation.
2. Learn the concepts of LMTD, Dimensionless numbers and detailed
construction & types of heat exchangers.
3. Study the fundamentals of mass transfer and various types of
diffusion processes.
4. Study the principles and different types of distillation.
5. Understand the concepts of extraction and drying along with
different types of industrial equipment.
Unit I
Heat Transfer:
Introduction: Various modes of heat transfer, Conduction, Convection,
Radiation. Conduction: Basic law of conduction, Fourier’s law, Thermal
conductivity, Steady state unidirectional heat flow through single and
multiple layer slabs, cylinders and spheres with constant thermal
conductivities. Insulation: Introduction and types of insulation, critical
thickness of insulation. (PO1: M: Apply the knowledge of
mathematics, science, engineering fundamentals)
7 Hrs
Unit II
Convection, radiation and heat exchange equipment: Heat transfer by
natural and forced convection. Individual and overall heat transfer co-
efficient (HTC), LMTD, LMTD correction factor. Estimation of HTC under
natural and forced convection using correlations. Principles of radiation
and microwave heating. HT devices: double pipe heat exchanger, shell
and tube heat exchanger, Plate heat exchanger and single effect
evaporator. Dimensionless numbers in heat transfer and their
significance. (PO2: H: Identify and analyze complex engineering
problems reaching substantiated conclusions using first principles
of mathematics) 8 Hrs
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 66
Unit III
Mass transfer: Introduction to mass transfer operations, classification
of mass transfer operations and their application in industries. Molecular
diffusion: Fick’s law of diffusion and its application for steady state
diffusion of component A through non-diffusing B. Equimolar counter
current diffusion. Mass transfer coefficient and its correlations.
Numerical problems. Molecular diffusion in biological solutions and gels.
Mass transfer theory: Film theory and its significance. (PO2: H: Identify
and analyze complex engineering problems reaching substantiated
conclusions using first principles of mathematics)
8 Hrs
Unit IV
Mass transfer operations and equipment:
Distillation: Principle, distillation of binary mixture, Raoult’s law,
Methods of distillation: Differential and steam distillation. (PO1: M:
Apply the knowledge of mathematics, science, engineering
fundamentals)
Construction and working of distillation column. Estimation of number
of theoretical plates by Mc Cabe and Thiele method. Numerical problems.
(PO2: H: Identify and analyze complex engineering problems
reaching substantiated conclusions using first principles of
mathematics) 8 Hrs
Unit V
Extraction and drying: Liquid extraction, liquid liquid equilibria, choice
of solvent, single stage extraction, multi stage cross current extraction.
Drying: Batch and continuous drying operations, drying rate curve,
classification of drying equipment – direct driers, indirect driers, freeze
drying, rotary driers, drum driers, spray driers. (PO1: H: Apply the
knowledge of mathematics, science, engineering fundamentals)
8 Hrs
TEXT BOOKS:
1 Pauline M. Doron
Bioprocess Engineering Principles, 2nd Edition, 2013, 978-0-12-220851-5
2 McCabe W.L. and Smith J.C.
Unit operations in Chemical Engineering. McGraw-Hill, New York, E7th Edition, 1993, ISBN 007-
124710-6
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 67
REFERENCE BOOKS
1 Coulson and Richardson.
Chemical Engineering. Vols. 1, 2 & 4, Butterworth-Heinemann Ltd, 3rd Edition 1999,
0750641428
2 Robert E Treybal Mass Transfer Operations Vol 2, Issue 4, McGraw Hill Education,3rd Edition, 1981, 1259029158
Course Outcomes: After the completion of this course, students will be able to:
1. Apply the concepts of conduction to determine steady-state
unidirectional rate of heat transfer through different geometries.
2. Apply the concepts of convection in heat transfer equipment such as
double pipe heat exchanger and shell and tube heat exchanger.
3. Apply the concepts of diffusion to identify and formulate criteria for
selecting alternative separation technologies.
4. Apply the basic concepts of distillation and determine the number of
plates required for distillation.
5. Understand the concepts of various mass transfer operations like
extraction and drying.
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
4RBT05 2,3 2,3 1,2
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Apply the concepts of conduction to determine steady-state unidirectional rate of heat transfer through different geometries.
2 1
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 68
Apply the concepts of convection in heat transfer equipment such as double pipe heat exchanger and shell and tube heat exchanger
2 3 2
Apply the concepts of diffusion to
identify and formulate criteria for
selecting alternative separation
technologies.
2 2 2
Apply the basic concepts of distillation and determine the number of plates required for distillation
2 2
Understand the concepts of various mass transfer operations like extraction and drying.
3 2
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 69
MOLECULAR BIOLOGY LABORATORY
Lab Hours/ Week : 0+0+3 (L+T+P) Credits: 1.5
Course Code : 4RBTL01 CIE Marks: 50
SEE Marks: 50
Course objectives: This course will enable students to:
1. Study the important techniques involved in Molecular Biology.
2. Study the divisional stages of cell.
3. Study the isolation of genomic DNA from plant, animal and
microbial source.
4. Involve the use of recombinant DNA technology and other Common
gene analysis techniques.
5. Will develop basic knowledge and skills in cell and molecular
biology and become aware of the complexity and harmony of the
cell.
List of Experiments:
1. Study of divisional stages in mitosis (squash preparation and
staining–specimen: Onion root tip).
2. Study of divisional stages in meiosis (Permanent slides only).
3. Study of Drosophila mutants, Barr eye, vestigial wings, yellow
body, white eye.
4. Polytene chromosomes, Lampbrush chromosomes – permanent
slides.
(PO1: M, Knowledge transfer: Knowledge of basic science)
5. Isolation of plant protoplasts by enzymatic method and its fusion.
(PO2-L: To gather knowledge and applying the knowledge in
identifying the biological use of the technique)
6. Isolation of plasmid DNA from E.coli.
7. Isolation of genomic DNA from Plant.
8. Isolation of genomic DNA from animal source.
9. Isolation of genomic DNA from microbial source.
(PO2-L: To gather knowledge and applying the knowledge in
identifying the suitable protocol to perform experiment, PO6-L
Imbibing professional engineering practices, PO5-M: Use of modern
equipment)
10. Agarose gel electrophoresis and quantification of nucleic acids
(260/280 method spectrophotometric method).
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 70
11. Restriction mapping (Single or double digestion).
12. Study of SDS-PAGE.
13. PCR.
(PO2-L: To gather knowledge and applying the knowledge in
identifying the suitable protocol to perform experiment, PO6-L
Imbibing professional engineering practices, PO5: Use of modern
equipment)
14. Study of conjugation in E.coli – Kit method.
15. Transformation of E.coli cells – Calcium chloride method (Kit may
be used). Selection of recombinants (Blue-White screening).
(PO2-L: To gather knowledge and applying the knowledge in
identifying the suitable protocol to perform experiment, PO6-L
Imbibing professional engineering practices, PO5: Use of modern
equipment)
TEXT BOOKS:
1 H S Chawla Introduction to Plant Biotechnology, Oxford
and IBH Publication, New Delhi, 3rd
Edition, 2017, 945-0299108236
2 F.M. Ausubel, R. Brent,
R.E. Kingston, D.D.
Moore, J.G. Seidman,
J.A. Smith, and K.
Struhl
Current Protocols in Molecular Biology,
Green Publishing Associates, and Wiley-
Interscience John Wiley and Sons, New
York, 1st Edition, 1987, 989-0299108245
REFERENCE BOOK:
1 Primates Principles of Gene Manipulation and
Genomics, Wiley-Blackwell Publishers, 7th
Edition, 2006, 945-2599108245
Course Outcomes:
After the completion of this course, students will be able to:
1. Memorize and understand the divisional stages of cells, Drosophila
mutants, and special forms of chromosomes. (BL:L1) (PO1-M, PO5- L,
PSO1-L, PSO3-L)
2. Describe the process of isolation of plant protoplast with their use in
molecular biology experiments. (BL: L2) (PO2-M, PSO1-L, PSO3-L)
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 71
3. Discuss and execute DNA isolation from various sources and interpret
the advantages and disadvantages of each method. (BL: L2, L3) (PO2-
M, PO5-L, PO6-L, PSO1-L, PSO3-L)
4. Explain the use of electrophoresis, restriction mapping and DNA
amplification techniques in various molecular biology experiments.
(BL: L2, L3) (PO2- M, PO5- M, PO6-L, PSO1-L, PSO3-L)
5. Define, classify and execute bacterial conjugation, transformation and
identify the developed recombinants using cell specific media. (BL: L2,
L3) (PO2-M, PO5- H, PSO1-L, PSO3-L)
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM OUTCOMES
Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
4RBTL01 2 1 2 1 1 1
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Memorize and understand the divisional stages of cells, Drosophila mutants, and special forms of chromosomes.
2 1 1
Describe the process of isolation of plant protoplast with their use in molecular biology experiments.
1 1 1
Discuss and execute DNA isolation from various sources and interpret
the advantages and disadvantages of each method.
1 2 1 1 1
Explain the use of electrophoresis, restriction mapping and DNA amplification techniques in various molecular biology experiments.
1 2 1 1 1
Define, classify and execute bacterial conjugation, transformation and identify the developed recombinants using cell specific media.
1 2 1 1 1
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 73
TRANSPORT PROCESSES LABORATORY Lab Hours/ Week : 0+0+3 (L+T+P) Credits : 1.5
Course Code : 4RBTL02 CIE Marks : 50
SEE Marks : 50
Course objectives: This course will enable students to: 1. Learn basic Momentum transfer concept unit operations of
Chemical engineering.
2. Understand operations of flow measuring devices.
3. Hands on training in unit operations of Chemical engineering.
4. Exposure to mass transfer operations.
5. Study the basic concept of heat transfer in Heat exchangers.
List of Experiments:
1. Flow through circular conduits.
(PO1: M, Knowledge transfer: Knowledge of Chemical engineering)
(PO2: M Evaluates the analysis of accuracy and validity of
assumption made) (PO4: L Analyse the data including considering
the source of error)
2. Orifice meter.
3. Venturi meter.
(PO1: M, Knowledge transfer: Knowledge of Chemical engineering)
(PO2: M Evaluates the analysis of accuracy and validity of
assumption made)
4. Simple distillation. 5. Steam distillation. 6. Packed column distillation.
7. Single and Multistage extraction. 8. Double pipe heat exchanger.
9. Shell and tube heat exchanger. 10. Thermal conductivities of insulating materials. 11. Centrifugal Pump 12. Diffusivity Measurement.
13. Batch Dryer. 14. Adsorption.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 74
(PO1: M, Knowledge transfer: Knowledge of Chemical engineering)
(PO2:M Evaluates the analysis of accuracy and validity of
assumption made)
TEXT BOOKS:
REFERENCE BOOK:
1 Coulson J. II and
Richardson J.F.
Chemical Engineering.Vol.1.Asian Books. New
Delhi. 6th Edittion, 1998, 945-0-11-230853-2
2 Badger W.I. and
Banchero J.T.
Introduction to Chemical Engineering, Tata
McGraws-Hill. New York, 6th Edition, 2001, 956-0-
11-260253-4
Course Outcomes: After the completion of this course, students will be
able to:
1. Calculate frictional losses and pressure drops in piping system and
fluidized bed. (BL: L4) (PO1-M, PO2-M, PO4-L, PSO1-L)
2. Determine Coefficient of discharges in flow measuring devices of
Venturimeter and Orifice meter. (BL: L4) (PO1-M, PO2M, PSO1-L)
3. Determine the Rayleigh equation, performance efficiency and
number of stages in distillation. (BL: L4) (PO1-M, PO2M, PO4-L,
PSO1-M)
4. Analyse the effect of single stage and multiple stages in separation
of components in extraction. (BL: L4) (PO1-M, PO2M, PSO1-M)
5. Deduce the rate of heat transfer and area required in heat
exchanger. (BL: L4) (PO1-M, PO2M, PSO1-L)
1 McCabe W L
et. al.
Unit Operations of Chemical Engineering, McGraw
Hill. New York, 7th Edition, 1993, 945-0-12-220856-4
2 Kumar K L. Engineering Fluid Mechanics, Eurasia Publishing
House (p) Ltd., New Delhi, Ed77th Edition, 1995,
969-0-12-220823-4
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 75
CORRELATION BETWEEN COURSE OUTCOMES WITH PROGRAM
OUTCOMES Program articulation matrix
Course
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
4RBTL02 2 2 1 1
Mapping of course outcomes with program outcomes
Course outcomes
Program outcomes (POs)and Program specific
outcomes (PSOs)
PO
1
PO
2
PO
3
PO
4
PO
5
PO
6
PO
7
PO
8
PO
9
PO
10
PO
11
PO
12
PSO
1
PSO
2
PSO
3
Calculate frictional losses and pressure drops in piping system and fluidized bed
2 2 1 1
Determine Coefficient of discharges in flow measuring devices of Venturimeter and Orifice meter
2 2 1
Determine the Rayleigh equation, performance efficiency and number of stages in distillation
2 2 1 2
Analyse the effect of single stage and multiple stages in separation of components in extraction
2 2 2
Deduce the rate of heat transfer and area required in heat exchanger
2 2 1
1: Low, 2: Medium, 3: High
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 76
ENVIRONMENTAL SCIENCE
Contact Hours/Week : 2+0+0 (L+T+P) Credits : 0
Total Lecture Hours : 26 CIE Marks : 50
Course Code : HSS05 SEE Marks : 50
Course Objectives: This course will enable students to:
This course introduces the students to the problems of depletion of
natural resources due to deforestation, agricultural practices, and
adverse environmental effects, pesticides, soil erosion, mining. Different
types of energy- renewable, non-renewable and energy conservation,
impact of environmental pollution on water quality, air quality, soil
pollution and noise pollution, solid waste management- disposal,
treatment of different types of solid waste including MSW, e-waste,
biomedical waste, societal impact of environmental issues- ozone layer
depletion, GHG effects, water conservation and harvesting and
environmental protection & acts.
Unit I
Introduction:
• Components of Environment and their interactions • Ecology, Ecosystem and types
Natural Resources:
• Forest Resources-Deforestation, Causes of deforestation, Environmental effects of deforestation and solutions
• Water resources, World’s water reserves, Hydrological cycle
• Land resources, Land degradation. Soil erosion, Causes and prevention, Soil conservation and its types
• Mineral resources of India, Mining & its adverse effects
Numerical problems on rainfall & runoff
6 Hrs
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 77
Unit II
Energy and resources:
• Types of Energy-Renewable, Non renewable & sustainable energy & their advantages and disadvantages
• Renewable energy sources- Solar energy, Wind energy, Tidal energy, Ocean thermal energy. Geothermal energy, Hydroelectric power, Biomass energy, Hydrogen energy, Thermal power- environmental impacts
• Conservation of energy • Numerical problems on Solar energy, Wind power 5 Hrs
Unit III
Environmental pollution:
• Sources of pollution- Natural sources, & Anthropogenic • Pollutants- Classification & their effects on environment • Air pollution-Composition of clean air, Sources of air pollution & Air
pollutants, Effect of air pollution on humans, animals and plants &
climate • Water quality–Potable water, Wholesome water, Sources of water
pollution Polluted water & Contaminated water, • Common impurities in water (physical, chemical and bacteriological),
Effects of impurities on humans & industrial use • Soil Pollution-Sources, Effects & its control
• Noise pollution- Sources of noise, Effects on human health & its control
Numerical problems on pH, hardness of water, noise pollution 5 Hrs
Unit IV
Solid Waste Management:
• Refuse, Garbage, Rubbish, Ash, types of solid waste • Necessity of safe disposal, Impacts on human health and
environment • Classification of solid wastes- Quantity and composition of MSW,
Collection of solid waste- methods • Disposal of solid waste-Sanitary land-fill • E-waste- Problems and solutions • Biomedical waste-Impacts on human health, storage, treatment
methods and disposal Numerical problems on moisture content, density & area land fill
5 Hrs
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 78
Unit V
Sustainable development:
• Issues on energy utilization, water conservation, concept of 3 Rs, Rain water harvesting- methods
• Global environmental issues: Population growth, Urbanization, Global warming, Acid rains, Ozone layer depletion & controlling measures
• Environmental acts, Regulations, Role of state & central governments
• Introduction to GIS & Remote sensing, their applications in
environmental engineering practices
Numerical problem on carbon foot print & rainwater harvesting 5 Hrs
TEXT BOOKS:
1 Benny Joseph Environmental Studies, The McGraw-Hill
companies, 4th Edition, 2005, 978-0073532554
2 Snathosh Kumar Garg, Rajeshwari Garg and Dr Ranjani Garg
Ecological and Environmental Studies, Khanna Publishers, 3rd Edition, 2010, 987-0078532523
REFERENCE BOOK:
1 Erach
Bharucha
Environmental studies for Undergraduate Courses, 1st
Edition, 2013, University Press, 923-0024532545
Course Outcomes: After the completion of this course, students will be able to:
1. Describe the importance of forestation, effects of deforestation, land
degradation, adverse effects of mining on environment, using the
principles of natural sciences compute the runoff from rainfall &
estimates the conservation of water for beneficial use of humans.
2. Describe the Renewable sources of energy and formulate, review
literature, calculate power potential of solar & wind energy by using
the principles of natural sciences.
3. Describe the effects of pollution on air, water, soil & noise on
humans and environment, identify & analyze the pollution
problems related to air, water, soil & noise and quantify pollution
levels & draw valid inferences using engineering sciences.
Academic year 2020-21
III& IV Sem. B.E. Biotechnology, SIT, Tumakuru 79
4. Describe Impact of solid waste on human health and environment,
its safe disposal. Use population data & compute percapita solid
waste generation, land area requirement for sanitary landfill.
5. Describe the sustainable development, its importance, current
global environmental issues, Present state & central governments
protection acts, compute carbon foot print using
data(vehicles/industries) & asses its impact on environment.