A Geometric Morphometric Analysis of the Human Ossa Coxae for Sex Determination
Transcript of A Geometric Morphometric Analysis of the Human Ossa Coxae for Sex Determination
BOSTON UNIVERSITY
SCHOOL OF MEDICINE
Thesis
A GEOMETRIC MORPHOMETRIC ANALYSIS OF THE HUMAN OSSA
COXAE FOR SEX DETERMINATION
by
BRIANNE E. CHARLES
B.A., University of Wisconsin-Milwaukee, 2010
Submitted in partial fulfillment of the
requirements for the degree of
Master of Science
2013
Approved by
First Reader
Jonathan D. Bethard, Ph.D.
Instructor of Forensic Anthropology
Second Reader
Donald F. Siwek, Ph.D.
Assistant Professor of Anatomy and Neurobiology
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ACKNOWLEDGMENTS
I would like to thank the faculty of the Boston University School of Medicine Forensic
Anthropology program as well as my peers in the program for guidance and insight
throughout the research progress. Thank you to Dr. Dawnie Steadman and the University
of Tennessee-Knoxville for granting me access to the W.M. Bass Donated Skeletal
Collection and for the gracious individuals who have offered their remains or the remains
of their loved ones to be used to further the field of forensic anthropology.
I cannot express the gratitude that I have for my parents. They have opened many doors
for me and I am forever in debt for the love and support that they tirelessly provide.
Thanks also go out to my siblings, who have always set the bar high. They were all
tough acts to follow and friendly competition among family is always a good motivator to
be the best that you can be. Lastly, thank you to my cake friend. You made living alone
in Boston a little less lonely.
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A GEOMETRIC MORPHOMETRIC ANALYSIS OF THE HUMAN OSSA
COXAE FOR SEX DETERMINATION
BRIANNE E. CHARLES
Boston University School of Medicine, 2013
Major Professor: Jonathan D. Bethard, Ph.D., Instructor of Forensic Anthropology
ABSTRACT
This study compares sexual variation of the human skeletal pelvis through
geometric morphometric analyses. Digitization of the skeletal elements provides the
framework for a multi-faceted examination of shape. The sample used in the study
consists of individuals from the Bass Donated Skeletal Collection, located at the
University of Tennessee-Knoxville. Landmarks digitized for the study are derived from
the 36 points implemented in Joan Bytheway and Anne Ross’s geometric morphometric
study of human innominates (2010). The author hypothesizes that morphological
variation between males and females will be visible to varying degrees throughout the
pelvis, with structures to be compared consisting of the ilium, ischium, pubis, obturator
foramen, and acetabulum. Particular attention will be paid to the pelvic canal, as this area
seems to carry the most sex-specific function of the bone. It is hypothesized that
structures directly contributing to the pelvic canal will be more sexually dimorphic than
peripheral structures. Data points plotted throughout the pelvis will allow for comparison
of various regions. Results indicate that the innominate can be divided into modules with
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relatively low levels of covariation between them. Greatest amounts of sexual
dimorphism are located at the pubis and ischium. The shape of the acetabulum and
obturator foramen display little variation between the two sexes. Areas that have the
potential for sex determination could be investigated more thoroughly in the future and
may be of use in forensic cases in which remains are incomplete.
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TABLE OF CONTENTS
Page
Title Page i
Copyright ii
Approval Page iii
Acknowledgments iv
Abstract v
List of Tables viii
List of Figures ix
List of Abbreviations xi
Chapter 1: Introduction 1
Chapter 2: Previous Research 4
Chapter 3: Methods 29
Chapter 4: Results 53
Chapter 5: Discussion 70
Chapter 6: Conclusions 77
Appendix A: Bytheway and Ross (2010) landmarks 79
Appendix B: Angular comparison of PC and PLS vectors 81
Bibliography 101
Curriculum Vitae 108
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LIST OF TABLES
Page
Table 3.1. Landmarks. 34
Table 4.1. Independent samples test for PC scores. 54
Table 4.2. Independent samples test for PLS scores. 65
Table 4.3. Modularity subsets. 69
Table A.1. Landmarks and descriptions. 79
Table B.1. P-values: PC (all) vs. PLS1-PLS7. 81
Table B.2. P-values: PC (all) vs. PLS8-PLS14. 84
Table B.3. P-values: PC (all) vs. PLS15-PLS21. 86
Table B.4. P-values: PC (all) vs. PLS22-PLS28. 89
Table B.5. P-values: PC (all) vs. PLS29-PLS35. 92
Table B.6. P-values: PC (all) vs. PLS36-PLS42. 95
Table B.7. P-values: PC (all) vs. PLS43-PLS48. 98
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LIST OF FIGURES
Page
Figure 2.1. The three bones of the innominate. 7
Figure 2.2. Planes of the pelvis. 7
Figure 2.3. Bytheway and Ross (2010) difference vectors. 27
Figure 3.1. Age distribution of sample. 31
Figure 3.2. Landmarks. 36
Figure 3.3. Landmarks 6, 24, 25, 27, 28, and 29. 37
Figure 3.4. Setup for digitization. 39
Figure 3.5. Procrustes superimposition. 43
Figure 3.6. Wireframe of PC1. 45
Figure 3.7. Wireframes of male PC1 and female PC1. 45
Figure 3.8. Superior and inferior blocks for PLS. 49
Figure 4.1. PCA eigenvalues. 54
Figure 4.2. PC1: axes 1vs. 2. 55
Figure 4.3. PC1: axes 1vs. 3. 56
Figure 4.4. PC1: axes 2 vs. 3. 56
Figure 4.5. PC1 vs. PC2. 57
Figure 4.6. PC4: axes 1 vs. 2. 58
Figure 4.7. PC4: axes 1vs. 3. 58
Figure 4.8. PC4: axes 2 vs. 3. 59
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Figure 4.9. PC11: axes 1 vs. 2. 60
Figure 4.10. PC11: axes 1 vs. 3. 60
Figure 4.11. PC11: axes 2 vs. 3. 61
Figure 4.12. Female PC1: axes 1 vs. 2. 62
Figure 4.13. Male PC1: axes 1 vs. 2. 62
Figure 4.14. Discriminant and cross-validation scores. 63
Figure 4.15. Wireframe of discriminant analysis. 64
Figure 4.16. Total percent squared variance between Block 1 and Block 2 per
PLS axis.
66
Figure 4.17. PLS1: axes 1 vs. 2. 66
Figure 4.18. PLS1: axes 1 vs. 3. 67
Figure 4.19. PLS1: axes 2 vs. 3. 67
Figure 4.20. PLS1: Block 1 vs. Block 2. 68
Figure 4.21. Modules. 69
Figure 5.1. Five modules of the innominate. 73
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LIST OF ABBREVIATIONS
A-P Anterior-posterior
CS Centroid size
DFA Discriminant function analysis
GPA General Procrustes analysis
MANCOVA Multivariate analysis of covariance
M-L Medial-lateral
PC Principal component
PCA Principal components analysis
PLS Partial least squares
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Disclaimer: In this thesis, the term “sex” is used to describe a trait in an individual’s
biological identity. The binary terms male and female reflect sex in this paper and should
not be considered synonymous with cultural indicators of gender.
CHAPTER 1: INTRODUCTION
Sex determination is one of the key elements in developing the biological profile
of an unknown individual. Determining sex is important because other estimations such
as age and stature depend on whether the individual is male or female and accurate
assignments of sex can reduce the field of potential individuals for identification matches
in forensic cases. Reliable methods of sex determination are therefore important tools to
a forensic anthropologist. However, skeletons rarely show only “typical” male or female
traits, requiring an analysis that uses as many sexing techniques as can be applied,
including traditional morphological comparisons and metric measurements (Wienker
1984). In addition, forensic or archaeological remains may be fragmentary or
incomplete, further obscuring potential metric or morphological assessments.
Both metric and nonmetric methods for determining sex are common and vary in
degree of accuracy depending upon the element, the level of dimorphism, and even the
population that the method was created from or is being applied to. A brief glance at
Buikstra and Ubelaker’s Standards for Data Collection from Human Skeletal Remains
(1994) or other human osteology manuals such as White and Folkens (2005) or Bass
(2005) can highlight the handful of traits from the skull and pelvis that are most
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commonly used by osteologists to determine sex. Characteristics of the skull (i.e., nuchal
crest, mastoid process, supraorbital margin, glabella, and mental eminence) are evaluated
on a scale from 1 to 5 and tend to be more robust in males. Populations have shown to
vary in the sectioning point between males and females in such traits (Walker 2008).
On the pelvis, the greater sciatic notch is evaluated on a graded scale similar to
the skull, yet until recently, the popular Phenice traits could only be applied as a
“present” or “absent.” Klales et al. (2012) has taken a revolutionary step by assigning
each of the Phenice traits a graded scale and weighing them by their individual ability to
determine sex (see Previous Research section). The system presented by Klales et al.
acknowledges the degree of morphological variation that is possible within the
innominate even between individuals of the same sex.
The overall goal of this study is to apply geometric morphometrics to a sample of
skeletons from a collection of modern, well-documented individuals in order to quantify
sexual dimorphism in general as well as differences in expression of sexual variation
between specific regions of the pelvis. The ilium, ischium, pubis, obturator foramen, and
acetabulum will be analyzed together as a whole unit and as separate structures. The
author hypothesizes that morphological variation between males and females will be
observable to varying degrees between the highlighted regions. The growth and
remodeling of the ischium and pubis in particular vary between sexes during puberty and
the pelvic canal has the most sex-specific function of the pelvis. It is hypothesized that
structures directly contributing to the pelvic canal will be more sexually dimorphic than
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peripheral structures. Because females are considered to be under greater constraints,
intra-sex variability will be tested to determine whether this is actually the case.
Questions addressed in this study include:
1. Is there variation in the degree of dimorphism between regions of the pelvis?
2. Do females have less intra-group variation in morphology than males?
3. Does variation in morphology reflect sex-specific functions of the pelvic canal?
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CHAPTER 2: PREVIOUS RESEARCH
Sexual Dimorphism and Sex Determination
The determination of sex from the human skeleton is important in forensic
anthropology because it narrows down the field of potential identification matches and
makes it easier to estimate other information from unknown individuals such as ancestry
and age. However, the skeleton is not always found in pristine condition. Trauma,
mortuary practices, or other taphonomic conditions may leave the skeleton damaged or
incomplete so sex determination cannot be dependent solely upon the interpretation of
single elements. Metric and morphological methods utilizing a variety of bones are
therefore advantageous when remains are incomplete.
Cranial and Postcranial Sex Determination
There is extensive research in sex determination that utilizes different bones of the
human body including long bones (İşcan and Miller-Shaivitz 1986; Purkait 2005),
clavicle and scapula (Frutos 2002), mandible (Loth and Henneberg 1996; Saini et al.
2011), and others overviewed in Buikstra and Ubelaker (1994) and Bass (2005). In
general, males tend to have larger elements, making metric discrimination possible
(Saunders and Hoppa 1997; Spradley and Jantz 2011). Males may also have more robust
articular surfaces and landmarks, which may distinguish them from bones of females
(Rogers 1999; Rogers et al. 2000; Vance et al.2011).
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Discriminant function analysis of the cranium was originally proposed by Giles
and Elliot (1963) to differentiate between sexes. Using 21 combinations of nine distinct
cranial measurements, they developed discriminant functions and male-female dividing
points. Walker (2008) similarly developed discriminant functions using combinations of
five visually-assessed cranial traits (nuchal crest, mastoid process, mental eminence,
orbital margin, and glabella/supra-orbital ridge). Both Walker (2008) and Giles and
Elliot (1963) found that discriminant functions for determining sex performed well, but
they also caution the application of sample-specific functions to other populations.
While many studies have focused on various parts of the skull such as the
craniofacial region (González et al. 2011; Bastir et al. 2011; Kimmerle et al. 2008), there
is much debate over the reported accuracy of craniometrics versus postcranial
measurements in sex estimation. One recent study that compared the accuracy of the
cranium to postcranial elements was presented by Spradley and Jantz (2011). They
generated univariate and multivariate models to determine whether metric measurements
of the cranium, mandible, or postcranium were most effective for sex estimation in
modern American Black and White populations. The authors found significant
differences in both sex and ancestry and confirmed that multivariate analysis of the
postcranial skeleton is better for sex classification than a multivariate analysis of the
cranium.
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Sexual Dimorphism of the Pelvis
Arguably, the most effective element for sex differentiation is the pelvic bone.
The pelvis, os coxa, or innominate is composed of three separate bones per side. Each
innominate consists of an ilium, ischium, and pubis bone and articulates with the other
innominate at the pubic symphysis (Figure 2.1). Each innominate also articulates with
the sacrum to complete the overall pelvic structure. Throughout this study, the terms os
coxa (pl. ossa coxae) and innominate are used interchangeably and refer to a single
element (mature and one side) unless otherwise specified. The articulated innominates
together as a unit will be referred to as the pelvis to avoid confusion.
Structure and Function of the Pelvis
There are a few terms that are used to describe the different functional regions of
the pelvis. First, a distinction can be made between the false pelvis and the true pelvis.
The false pelvis is superior to the true pelvis and the two regions are delimited by the
pelvic brim (Figure 2.2). The pelvic brim is marked by the linea terminalis and the
superior aspect of the sacrum. There are also three pelvic planes. The proximal plane is
called the inlet and is located at the level of the pelvic brim. The midplane is located at
the level of the ischial spines and the outlet is found at the level of the ischial tuberosities.
The greatest constriction of the pelvic canal is at the midplane (Kurki 2007).
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Figure 2.1. The three bones of the
innominate.
Figure 2.2. Planes of the pelvis. Adapted
from Oxorn (1986).
The pelvis has a very sex-specific function that, at least in females, has been cited
as inhibiting drastic intrasexual variation in morphology (Steyn and Patriquin 2009).
However, sex cannot be determined from the pelvis until the individual has reached
maturity since most sexually dimorphic traits do not begin to develop until adolescence.
Timing of fusion of juvenile innominates and continued growth after fusion may help
explain how some of the variation between sexes develops.
In general, male body size is greater than females. Some pelvic dimensions
follow this dimorphic trend, while others are inversed. Males tend to have a greater bi-
iliac breadth, canal depth, sacral length, and size of articular surfaces (Kurki 2007).
Dimensions in which females are greater than males are related to the pelvic canal. This
inverse size dimorphism can be observed in canal plane breadths and circumferences,
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anterior-posterior (A-P) lengths of the midplane and outlet, bi-acetabular breadth, pubic
bone length, sciatic notch breadth, length of the linea terminalis, angulation of the
sacrum, and the subpubic angle (Kurki 2007). Tague (2000) argued that pelvic
dimensions that are obstetrically important are independent of body size, while others of
less obstetric importance are reflective of overall body size. Some dimensions may be
more consistent between different populations and not reflect variation in body size.
The term “obstetric dilemma” was coined in 1960 by Sherwood Washburn. The
“dilemma” is that a human maternal pelvis must have both large enough dimensions to
enable birth of a large-headed neonate while at the same time maintaining optimal
bipedal biomechanics. A “bipedalism-encephalization conflict” has long been considered
the ultimate factor influencing risks of human delivery. Increased medial-lateral (M-L)
breadth of the pelvis and decreased height compared to other mammals optimize the
biomechanics of locomotion, and increased A-P pelvic dimensions enable mothers to
give birth to big-headed infants (Wells et al. 2012).
The obstetric dilemma as an explanation for high rates of perinatal mortality of
mother and child in humans has been recently reconsidered by Wells et al. (2012). The
authors suggest that bipedalism did not have as great an effect upon maternal pelvic size
as has been assumed. A variety of ecological factors may influence the magnitude of the
obstetric dilemma, including thermal environment, dietary energy availability, glycemic
load, and infectious disease burden (Wells et al. 2012). These factors may also reduce
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the canalization of shape that is typically attributed to females, thereby making female
innominates no less variable than the innominates of males.
Wells et al (2012) present statistics of maternal and offspring prenatal deaths,
perinatal deaths, and deaths occurring after delivery. They found that 98% of perinatal
deaths occur in nonindustrial settings. The high ratio of perinatal deaths in nonindustrial
settings highlights the role that medical centers and public health programs play in
reducing mortality around the time of birth. Over 50% of maternal deaths occur in just
six countries, although the high death rates are also related to high fertility rates, which is
another important point to consider (Diamond-Smith and Potts 2011). Also, not all
maternal or offspring deaths are a result of cephalo-pelvic disproportion.
Maternal mortality has been reduced greatly in the recent decades (Hogan et al.
2010), suggesting that childbirth was a greater threat in the past than it is today.
However, it is difficult to conclusively determine obstetrically-related deaths in the
archaeological record. Burials containing a woman with a fetus located in the pelvic
region may or may not reflect death caused by cephalo-pelvic complications during the
birthing process. Mothers and neonates were also particularly susceptible to infectious
disease, which may present itself in a co-burial as an “obstetric death” even though
factors other than cephalo-pelvic disproportions may have caused their death (Wells
1975; Wells et al. 2012).
In comparison to other primates, not only is the human brain larger at birth, but
the human body in general is also larger at birth than other primates. Even though human
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brains may be larger, they are at the lower limits of completed brain growth at birth when
compared to primates and other mammals (Wells et al. 2012). In order to survive outside
the womb, offspring must develop a viable proportion of the adult brain before birth. At
birth, the human brain is viable in the sense that it can sustain functionality of the body,
yet it is relatively incomplete, leaving neonates to depend heavily on others. A more
developed brain would be advantageous at birth but there are multiple factors that prevent
prolonged growth in the womb, only one of which is the form of the maternal pelvis.
Additionally, the larger overall body size of the human neonate plays a supportive
role to the larger brain. For instance, human brain metabolism is approximately 80% of a
neonate’s total basal metabolism and increased levels of adipose in infants may buffer the
high energy demands of the brain (Kuzawa 1998; Wells et al 2012). Broad shoulders
also provide support for an enlarged head. If a human fetus was allowed to continue
growth of the brain prior to birth, it would also require a larger body overall and the fetus
would demand both more space and more energy from the mother. This leads to another
problem suggested by Ruff (1994) regarding thermodynamics. As more of the maternal
energy supply is demanded by the fetus, more heat is generated, and the fetus can only
get rid of heat through the mother (Wells et al. 2012).
The brain is not only taxing on the neonate, but also the mother while the
offspring is still in the womb. A mother with more available fuel is able to produce an
infant with a larger body and brain mass at birth. A brain needs to grow to a point of
viability before birth, yet it is under maternal energy constraints. Ellison (2001, 2008)
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suggests that termination of gestation occurs “at the time-point at which fetal energy
demand exceeds the capacity of maternal metabolism through placental nutrition” (Wells
et al. 2012). Rather than birth occurring in coincidence with the diminishing ability of
the pelvis to accommodate birth of a large-brained infant, it may be triggered by the
mother’s inability to further provide the increasingly high levels of energy that fetal
growth demands.
Relating birth to energy demands suggests that the obstetric pressures regulating
female pelvic size may not be as powerful as once believed. Cephalo-pelvic
disproportion has traditionally been named as a cause of perinatal death of the mother or
child, yet death may have been caused by other factors or unnaturally influenced by
dietary restrictions or inadequate attention during birth by medical professionals or
birthing attendants.
Body size vs. Pelvic Canal size
Since humans are known to vary in body size and shape within and between
populations, Wells et al. (2012) also looked at population variation of different
dimensions of the pelvis in comparison to neonatal head girth. Keeping in mind possible
measurement variations between studies, the between-population coefficient of variation
for A-P dimensions of the outlet is approximately 14%, the transverse dimension of outlet
is ~11%, for AP and transverse dimensions of the inlet ~7%, and ~9% for the pelvic brim
index. In comparison, the coefficient of variability for neonatal head girth is less than
<3% (Leary et al. 2006; Wells et al. 2012). If bipedal locomotion is controlling pelvic
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dimensions, it could be inferred that variation in dimensions as large as noted above
would lead to some populations being more adept at bipedalism than others, but that is
not the case. Instead, there is greater constraint in variability of neonatal head girth
across populations. This may be because the neonate head is more pliable than the
maternal pelvis (Johnson et al. 1994; Goldsmith and Weiss 2009; Wells et al. 2012).
In addition to the maternal pelvis, variability in morphology within and between
populations exists because both sexes are under a variety of selective pressures, including
environment, nutrition, and body posture. Thermodynamics plays a role in the body
forms of populations from different climatic conditions and as Ruff (1994) suggests, it
has influenced pelvic breadth. Consequentially, it is a factor that should be included in
the obstetric dilemma. As body size becomes larger, the ratio of the body’s surface area
to volume decreases. Body surface area is important to heat dissipation through
perspiration in humans. Heat production is proportional to body mass or volume and heat
dissipation is proportional to body surface area, but volume increases at an exponentially
greater rate than surface area as body size increases. Therefore, a larger body will have a
lower ratio of heat dissipated to heat produced than a smaller body, which would be
advantageous to someone trying to retain body heat in a cold climate. Vice-versa, a
lower ratio of body mass to surface area would allow people in warm climates to more
efficiently dissipate heat. Ruff (1991) modeled the human body as a cylinder and showed
that the surface area-to-mass ratio remains constant when height is changed as long as
body width stays constant. This means that populations that live in similar climates will
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have similar body breadths (commonly recorded through bi-iliac breadth of the pelvis),
regardless of stature.
Kurki (2011b) compared pelvic dimensions of over 180 females from 11 skeletal
samples of varying body size from around the world. She found that stature was not
significantly related to pelvic canal dimensions. However, femoral head diameter and bi-
iliac breadth each were correlated to the M-L breadth of the inlet, midplane, and outlet
measurements. The most frequently contracted dimensions were the M-L and A-P
dimensions of the inlet. In contrast, contractions of midplane and outer breadths were
rare. Only three individuals had a contracted midplane breadth at the 80mm threshold,
which, according to the thresholds established in the 22nd
edition of Williams Obstetrics
(Cunningham and Williams 2005), would increase the risk of an obstructed labor.
Contraction in the posterior space, measured between the ischial spine and anterior
surface of the sacrum, was found in 24 individuals at the 80mm threshold. Overall, the
results do not show increased risk or difficulty in childbirth within smaller-bodied
populations than larger-bodied ones. The overall obstetric function of the pelvis did not
seem to be affected by variation in body size or shape, but rather pelvic canal dimensions
were protected between populations.
The human pelvis is distinct from other animals because of the upright posture
needed to maintain bipedality. In addition, humans have large brains, but as described,
the growth of our brains is relatively incomplete at birth compared to other non-humans.
The dimensional constraints placed on the pelvis in order to support bipedalism are not
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the only thing controlling the timing of birth, nor do small-bodied females necessarily
have more difficulty giving birth. The variability of pelvic size and shape is not only
imposed on females, but males as well. Yet it seems that accommodations are made to
maintain a large enough pelvic canal to facilitate birth, regardless of maternal size. The
high level of plasticity in the neonate skull helps also. Nutritional and other health
stresses during growth in females may create constrictions, however, that put the mother
and/or infant at risk if not attended to.
Growth and development of the Ossa Coxae
General standards for development and fusion are documented in Developmental
Juvenile Osteology by Scheuer and Black (2000). The ilium, ischium, and pubis are all
present and recognizable from birth. Fusion of the ischium and pubis begins between the
ages of 4 and 8 years. The ilium fuses with the ischiopubic portion at the acetabulum
between the ages of 14 to 17 years in males and 11 to 14 in females. Secondary
ossification centers develop in the Y-shaped cartilage of the acetabulum around the age
of 9 or 10 years. These centers form part of the articular surface and most of the
acetabular rim (Baker et al. 2005). The first secondary ossification center of the
acetabulum is between the pubis and ilium. The posterior epiphysis between the ilium
and the ischium fuses between the ages of 10 and 11. Another secondary ossification
center develops at the superior rim of the acetabulum between the ages of 12 and 14
years. Other small ossicles can develop in the Y-shaped cartilage throughout growth.
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Fusion of the acetabulum occurs between 15 and 17 years of age in males and 11 and 15
years in females (Baker et al. 2005).
The elements of the innominate each have secondary ossification centers that
develop and fuse with age. A cap for the anterior inferior iliac spine begins to ossify
around the ages of 10 to 13 years. The iliac crest ossifies from two separate centers at
opposing ends of the ilium and grows toward the midpoint of the crest. These centers
begin to ossify in females around 12 to 13 years of age and in males around 14 to 15
years. The crest begins to fuse to the ilium between the ages of 17 and 20 years and is
complete by 23 years (Baker et al. 2005). The secondary ossification center of the
ischium is a curved cap for the ischial tuberosity that begins ossification around 13 to 16
years of age. It begins to fuse to the ischium between the ages of 16 and 18 years and is
fully fused around 21 to 23 years of age. The pubis lacks a defined inferior ramus at
birth. This aspect develops as a young child and completes fusion with the ischium by
the age of 8 years, encircling the obturator foramen. Secondary ossification on the pubis
occurs at the pubic symphysis, beginning around the age of 20 (Baker et al. 2005) and is
a useful location for age estimation in adults.
Sexual Differences in Growth and Development
Differences in the rate of growth and fusion of the innominates have been
observed between males and females. Reynolds (1945) found through a longitudinal
study of radiographs taken of infants at birth, 1, 3, 6, 9, and 12 months that males tended
to be larger in measurements that represented the outer structure of the pelvis while
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females tended to be larger in measurements representing the inner structure. It was also
found that growth was fastest between birth and 3 months and then decelerated through
the rest of the first year. In a study by Wilson et al. (2008), comparisons of iliac shape in
a historical sample of juveniles from birth to 8 years of age found that the shape of the
greater sciatic notch was the best indicator of sex in the sample and that males and
females tended to share an original morphology up to 6 months of age, after which they
develop into different shapes.
The adolescent period is the main time of development of the major sexual
differences in shape of the pelvis and is consistent in timing with other hormonally-
controlled changes (Coleman 1969; Greulich and Thoms 1944), however there is debate
whether androgens or estrogen play a larger role in facilitating growth and differentiation
of the skeleton during puberty (Kurki 2011; Tague 2005). William H. Coleman (1969)
recorded the longitudinal growth of the pelvis through radiographs taken at yearly
intervals of 30 individuals. Although the sample size is small (14 males and 16 females),
the longitudinal study provides yearly glimpses into the development of sexual dimorphic
traits over the critical period between the ages of 9 and 18 (Coleman 1969). Pelvic
models were outlined by plotting 76 defined points on each of the radiographs. Each
individual’s series of pelvic models were superimposed upon the individual’s determined
centroid shape in order to determine direction, distance, and velocity of growth over the
10 year period.
Coleman (1969) found that different components of the pelvic structure increase
differentially in size. The ilium, ischium, and pubis each grow in size as well as undergo
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differential reshaping and remodeling through selective surface deposition and resorption
of bone. As each component is remodeled, it must maintain its relationship with the
surrounding skeletal and soft tissue structures, which are also growing through the
adolescent period (Coleman 1969). Coleman found that the pelvic inlet displayed a large
degree of shape variation within each sex, but the sample average inlet breadth was
10mm greater in females than that in males. Direction of growth of the pubic bone was
comparable in males and females, but variation in velocities of growth, such as greater
growth at the medial border of the female pubic bone, may play a part in creating the
differences in the shape of the pelvic inlet (Coleman 1969). Coleman also suggested that
sexual dimorphism seen in the subpubic angle is derived from differential directional
growth of the midshaft of the ischiopubic ramus and inferior margin of the ischial
tuberosity, with lengthening of the female pubic bone having little direct influence.
No significant sex differences were found in growth for the anterior iliac crest. In
addition, growth of the greater sciatic notch was so variable that, according to Coleman,
morphology may resemble that of the other sex. However, other studies have had
different levels of success using the greater sciatic notch to determine sex in juveniles
(Sutter 2003; Wilson et al. 2008). Females had greater growth in the internal acetabular
and pubic regions in comparison to the total growth of the other pelvic regions. Also,
maximum breadth was observed to grow more laterally in females and the medial margin
of the ischial tuberosity moved more laterally during growth and remodeling.
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Methods of Sex Determination from the Os Coxa
Sex determination studies are based on either metric or morphological methods.
Traditional metric analysis of the pelvis can be unreliable because of its often high levels
of intra- and inter-observer error (Albanese 2003; González et al. 2007). Also, taking
discrete measurements of curved surfaces such as those found on the pelvis is
problematic. Morphological methods, on the other hand, tend to be more subjective and
variable between observers. Characteristics such as the Phenice traits, greater sciatic
notch, and pre-auricular sulcus are commonly included in morphological analysis of the
pelvis for sex determination.
Phenice Traits
The Phenice traits have been widely used since their introduction in 1969 as a
method of sex estimation from the morphology of the pubic bone. The method is based
on the presence or absence of three aspects in the pubic region: the ventral arc, the
subpubic concavity, and the medial aspect of the ischiopubic ramus (1969). Phenice
originally correctly assessed 96% of his Terry Collection sample and the method has
shown high accuracy across levels of experiences (Ubelaker and Volk 2002). Tests of
the Phenice method on European samples have been less accurate, making its utility
questionable in other populations (McLaughlin and Bruce 1990).
McLaughlin and Bruce (1990) tested the Phenice method on three European
samples, consisting of a 17th
and 18th
century cemetery collection, a dissecting-room
collection from the Netherlands, and a dissecting-room collection from Scotland. As
19
opposed to the present/absent dichotomy of the Phenice method, they included an
additional ambiguous category for traits that varied in the degree of expression or were
otherwise difficult to interpret. A single-observer test and multiple-observer test (n=34)
were conducted to test the accuracy of the method. The single-observer test correctly
sexed 83% of the English, 68% of the Dutch, and 59% of the Scottish individuals.
Females were more often accurately sexed by over 20% in both the English and Scottish
groups. The subpubic concavity was the most reliable trait for determining sex in the
single-observer test and was found to be even more reliable than the three traits
combined. The subpubic concavity was also the most reliable trait in the multiple-
observer test. Observers were split into groups based on their experience and significant
differences were found in the levels of correct sex determination between experienced
and inexperienced individuals, including a 12% difference in accuracy when using the
subpubic concavity alone.
Klales et al. (2012) outlined three flaws in the Phenice method of sex
determination. First, each trait is given equal weight in the assessment of sex because it
is assumed that each trait can determine sex equally well. Second, the three options for
scoring each trait do not cover the full range of variation in trait expression. Traits must
be assigned male, female, or indeterminate, giving the observer no flexibility when
describing ambiguous morphology. Lastly, the method has no means to identify
uncertainties through posterior probabilities. This is particularly troublesome when
20
dealing with Daubert standards in forensic cases (Daubert vs. Merrell Dow
Pharmaceuticals, Inc. 1993).
The revised method developed by Klales et al. provides a graded scale for the
ventral arc, subpubic contour, and medial aspect of the ischiopubic ramus. Each are
evaluated separately using a 5-point scale. In addition to altering the grading system to
accommodate for more variation in morphology, the authors tested reliability and validity
in order to provide users with classification standards. There was substantial
intraobserver agreement for both the ventral arc and medial aspect as well as moderate
agreement for the subpubic contour. Interobserver agreement was high for all three traits
and there were no significant differences in levels of agreement between the traits. In
terms of correct classification using single traits, the ventral arc ranked highest with
88.5% correct classification, followed by the subpubic contour at 86.6%. The medial
aspect of the ischio-pubic ramus had the lowest classification rate, with 75.8% correctly
classified. Classification rates were highest when all three traits are used together. In
addition, the authors provide a link to a webpage with color illustrations and further
details regarding individual trait assessment. A Microsoft Excel spreadsheet is also
available, in which the user can input trait scores and probabilities of correct sex
assessment are computed automatically.
The ventral arc is one of the three Phenice traits that are commonly present in
females and absent in males. Various theories have attempted to clarify the dimorphism
of this trait, including its relation to ligaments and soft tissue anatomy (Todd 1920), or
differential growth at the pubic symphysis (Kerley 1977). Budinoff and Tague (1990)
21
examine the relation of the ventral arc to the length of the pubic bone in cadavers and
skeletal samples from the Hamman-Todd collection. They found no differences between
the muscular and ligamentous attachments related to the ventral arc region of males and
females from the cadaver dissection. They also found a discrepancy between Phenice’s
description of the ventral arc extending from the pubic crest to the ischiopubic ramus and
their own observations. None of the dissected individuals and only 25% of the skeletal
sample had a ventral arc ridge that spanned this entire length. Lastly, they suggest that
the ventral arc is developed as a result of asynchrony in growth between the dorsal
margin and ventral margin of the pubis. This discrepancy is seen in females because their
innominates continue to grow into their 20s and beveling occurs because the dorsal
margin grows before the ventral margin (Budinoff and Tague 1990).
Another dissection study of the pubic bone did find correlation between the
ventral arc and the origin of the gracilis, adductor magnus, and adductor brevis muscles
in females (Anderson 1990). Even though all 12 adult females examined had muscle
attachments at the same sites, three did not have distinguishable ventral arcs. In
comparison to the male samples, the female muscle attachments were more laterally and
superiorly positioned than males. This was evident regardless of whether females
develop ventral arc ridges or not.
Greater growth at the pubic symphysis end of the pubic bone rather than growth
from the acetabular end has been noted in females (Todd 1921; Stewart 1956; Anderson
1990). Although male and female innominates may be indiscernible prior to puberty, the
22
additional growth of the female pubis has secondary effects of creating an increased
subpubic angle and a wider pubic body (Washburn 1948; Anderson 1990).
Population Specifics
Similar to MacLaughlin and Bruce (1990), other studies have also highlighted the
applicability of sex determination methods to various populations, indicating that sexual
dimorphism of the innominate is variable. For instance, Listi (2010) reported on the
effectiveness of different traits in sex determination and found that particular traits have
greater effectiveness than others in certain populations.
Listi (2010) researched whether quantitative differences in the pelvic bones of
Black and White Americans affected the ability to determine sex through morphological
traits. While an analysis of combined traits to determine sex showed no significant
difference in accuracy between races, some individual traits proved to have different
levels of effectiveness between the Black and White samples. For instance, one observer
found significant levels of variation in the distribution of sex assessment in six of the 19
traits tested. These included the medial aspect of the ischiopubic ramus, shape of the
pubic bone, auricular surface height, composite arch, external eversion, and phallic ridge.
All were classified correctly more often in black males than white males except the
composite arch.
23
Geometric morphometrics
Geometric morphometrics is defined by Slice (2005) as “the suite of methods for
the acquisition, processing, and analysis of shape variables that retain all of the geometric
information contained within the data.” Shape is “the geometric properties of an object
that are invariant to location, scale, and orientation” (Slice 2005). Form, on the other
hand, incorporates data for both size and shape. Therefore, in order to compare shapes,
size disparity between elements must be reduced and they must be rotated and placed
upon the same coordinate system.
Geometric morphometrics differs from traditional means of analysis because the
spatial relationships between multiple points can be recorded. From these configurations,
a mean shape can be developed and group means can be compared. Quantitative
methods such as geometric morphometrics are more objective and better able to detect
small degrees of variation than qualitative characterization. They also tend to be more
easily reproducible and data can be treated mathematically. However, some loss of
information occurs during geometric morphometrics because the information collected is
for discrete points, leaving the structures in between the points unaccounted for. For this
reason, landmarks should be chosen that are most representative of the shape and
expression of variation in the structure.
24
Landmarks
Type I landmarks are points defined by a juxtaposition of different tissues
(Bookstein 1991). Type I landmarks include bregma or pterion on the cranium, where
multiple sutures meet and create a discrete point of convergence. Type II landmarks are
points of maximum curvature, such as the tip of a tooth cusp or the apex of the greater
sciatic notch. Type III landmarks denote extreme points and require the examination of
the specimen as a whole. A Type III landmark can be found in various dimensions and
may change depending on the orientation of the structure’s axis (Bookstein 1991).
“Fuzzy landmarks” are points of prominence on a smooth surface (Valeri et al. 1998).
These landmarks are similar to Type II landmarks and include points such as the frontal
boss on the human cranium.
Geometric Morphometrics in Anthropology
Anthropology has played an integral part in the development of geometric
morphometrics. In 1905, Franz Boas suggested a method for comparing forms through
least-squares superimposition (Cole 1996). At the time, point-line registration systems
such as the Frankfurt Horizontal were used in craniometry to compare specimens. This
practice assumed that arbitrarily chosen points were biologically stable enough to serve
as the basis of a common coordinate system. Boas voiced concern about the disregard for
other landmarks and believed that comparisons could best be made when every point is
equally taken into consideration (Cole 1996). His method of superimposition through the
minimization of the sums of the squared distances between homologous points is nearly
25
identical to the method of least-squares superimposition that came into use in the late
1960’s (Sneath 1967; Cole 1996).
Eleanor Phelps, a student of Boas, applied his method to crania from three
populations for her PhD dissertation. She additionally compared the effects of popular
registration systems on variation at each landmark with Boas’ least-differences method
(Cole 1996). After fitting her samples using each system, she created a mean
configuration by creating average coordinates for each landmark, a method that mimics
the Procrustes mean calculation used today (Rohlf and Slice 1990). Phelps found that the
least-differences method minimized variation over all points simultaneously, whereas
registration methods highlighted landmark-specific variation (Cole 1996).
Anthropological studies incorporating geometric morphometrics have largely
focused on the skull, but other skeletal elements have been analyzed as well. Bytheway
and Ross (2010) applied geometric morphometrics to quantify the shape of the
innominate and compare the shapes of two ancestry groups. Their sample consisted of
200 European American and African American men and women (50 from each group)
from the Terry Collection. Thirty-six landmarks were digitized from each innominate.
Some landmarks were developed by Bytheway, while others were based on metric and
geometric landmark literature (Steudel 1981; Lele and Richtsmeier 2001; Bookstein
1991; Seidler 1980; Coleman 1969; Bytheway 2003). All individuals were brought onto
a common coordinate system through a generalized Procrustes analysis (GPA). This
procedure minimizes the sum of squared distances between landmarks and a mean shape,
26
effectively scaling all individuals to a unit centroid size (CS) so that shape can be
observed independent of size. A principal components analysis (PCA) of the covariance
matrix was conducted to reduce dimensionality of the GPA transformed data. PCA
scores were then tested to determine whether size and sex have significant effects on the
average shapes of each sex within each population. This was conducted through a
multivariate analysis of covariance (MANCOVA). Comparisons were also made
between the mean CS of each sex for each population using independent group t-tests.
The MANCOVA results indicated that size and sex had significant effects on both
European American and African American groups. The male CS mean and female CS
mean were determined through t-tests to be significantly different from one another. This
dimorphism was found in both population samples and the sexes also varied significantly
across groups (Bytheway and Ross 2010). Sex-specific shape variation within each
group was illustrated through difference vectors. Difference vectors diagram the
magnitude and direction of shape change between female and male mean configurations,
with each landmark having a corresponding line showing the scaled dissimilarity and
direction of variation between sexes (Figure 2.3).
27
Figure 2.3. Left: Difference vectors of African American female mean (grey) to
male mean (black). Right: Difference vectors of European American female mean
(grey) to male mean (black). Scale 3x. From Bytheway and Ross (2010). NOTE:
Landmark numbers do not correspond with the landmarks in thesis.
Bytheway and Ross found similar patterns of sexual dimorphism between African
American and European American populations, but the European American sample
seemed to be less dimorphic than the other population. Sex-specific pelvic variation
included more medially-placed landmarks on the mean female pubic symphysis and more
posteriorly-placed landmarks associated with the ischium and ischiopubic ramus in
females compared to males. They also found that the shape of the obturator foramen and
acetabulum was not significantly different between males and females. Overall, they
found that the pubis, ilium, and ischium are the most sexually dimorphic regions of the
pelvis. They also found that each sex varies in size in comparison to the same sex of the
other population.
Another study evaluated the application of geometric morphometrics to determine
sex in samples without reference collections (González et al. 2007). Two landmarks and
a series of semi-landmarks for each greater sciatic notch and ischiopubic region of the
28
innominates were digitized on individuals from two different prehistoric populations
from Argentina. K-means clustering was used to classify individuals into two groups
based on greatest possible distinction. In previous work by González (2005), k-means
clustering was found to accurately assign sex in individuals from the Coimbra Collection
91.7% of the time. In the same study, discriminant analysis was accurate in 94.2% of the
individuals. The author believed that this validates the use of k-means clustering to
assign sex, particularly when there is no reference population. González et al. (2007)
determined that the expression of sexual dimorphic traits in the two prehistoric
populations differed. For instance, they found that in the first population, the greater
sciatic notch was more dimorphic than the ischiopubic ramus and in the second, both
structures showed similar levels of dimorphism.
29
CHAPTER 3: METHODS
Sample
There were a few factors that needed to be considered for this study. One was
whether to look at a particular area or take a more general approach by studying aspects
of the whole innominate. Multiple geometric morphometric studies have focused on the
greater sciatic notch, including González et al. (2007), González et al. (2009), Pretorius
et al. (2006), and Steyn et al. (2004). On the other hand, Bytheway and Ross (2010) plot
points throughout the pelvis on both the medial and lateral side. The study presented in
this thesis used similar methods to Bytheway and Ross, incorporating landmarks and
semi-landmarks that were plotted throughout the entire innominate bone. While no area
received particular attention over others, results may reflect areas that exhibit more
sexual dimorphism and could be investigated in future studies.
Age-at-death of the individuals included in the sample also needed to be taken
into consideration. Secondary sex characteristics are not established until puberty,
making sex determination very difficult in subadult remains (Bass 2005; Mittler and
Sheridan 1992). Growth and morphology of the pubis continues beyond fusion of the
pelvis in females, making sex estimation of young females more difficult (Coleman 1969;
González et al. 2009). Age can affect the greater sciatic notch morphology as well
(Walker 2005). Performing this study on a sample that has recorded age-at-death for the
individuals incorporated is therefore important. The age range of individuals used in this
study is set between 30 and 65 years at death.
30
Past geometric morphometric studies of the pelvis have been completed on
samples from the Terry Collection at the Smithsonian Institute, Washington, D.C.
(Bytheway and Ross 2010); the Pretoria Skeletal Collection at the Department of
Anatomy, University of Pretoria, Pretoria, South Africa (Steyn et al. 2004; Pretorius et al.
2006); the collection at the Museu Antropologico de Coimbra, University of Coimbra,
Coimbra, Portugal (González et al. 2009); and two late Holocene samples from Southeast
Argentina and Northwest Argentina housed at the Museo de La Plata (González et al.
2007). The research presented in this thesis is particularly focused on the use of
geometric morphometrics in forensic applications in the United States. While the Terry
Collection was utilized in the original study by Bytheway and Ross (2010), the
collection’s birth years range from 1828 to 1943, thereby reducing its applicability to
modern populations. Also, the ancestries of individuals in the Terry Collection were
recorded at a time when racial classifications were based on social rather than biological
categories (Hunt and Albanese 2005). These classifications may result in the
misrepresentation of individuals within a sample for studies in which ancestry may be a
factor.
The research consists of data that was collected on a skeletal sample from the
W.M. Bass Donated Skeletal Collection housed at the University of Tennessee-
Knoxville. Background information on the individuals is well-documented, including in
most cases age, sex, ancestry, cause of death, and body mass. Birth years range from
31
Age Distribution of Sample 40
35
30
25
20
15
10
5
0
30-39 40-49 50-59 60-65
female
male
Figure 3.1. Age distribution of sample, separated by sex.
1892 to 2011, with the majority born after 1940. The study sample consists of 168
individuals (male=92, female=76) in the age range of 30 to 65 years (Figure 3.1). Year of
death ranges from 1988 to 2009 for the individuals included in the study, with an age
range between 31 and 65 years. The mean age is 50.8 ± 8.6 years. While there is only
one more male than female in each of the 10-year age groups over 50 years, there is
greater discrepancy between sexes in the younger individuals. There are 10 more males
than females in the age group of 30-39 and three additional males in the 40-49 year age
group.
In the future, the investigator would like to continue geometric morphometric
research regarding the level of sexual dimorphism among populations; however, due to
the relatively low level of ancestral diversity in the Bass Donated Skeletal Collection, the
current sample consists only of White or European American males and females. Only
32
left innominates were analyzed. Innominates that were fused at the sacroiliac joint,
heavily damaged, or exhibiting other conditions that would inhibit data collection (such
as hip replacements) were excluded from the study.
A Microscribe® digitizer was used to gather data. The digitizer provides a 3-
dimensional representation of shape. The base of the digitizer acts as a point of origin. A
stylus attached to a rotatable arm can be moved to different points on the element being
measured. Once at the intended point, the x, y, and z coordinates of that point are
recorded in relation to the point of origin. As long as both the element being digitized
and the base of the digitizer remain stationary, all points or landmarks will be plotted in
relation to the same origin and to one another.
The established landmarks or semi-landmarks were digitized for each innominate
using protocol outlined below. The landmarks used in this study were originally used in
a geometric morphometric study by Bytheway and Ross in 2010. The landmarks can be
divided into groups based on which bone (ilium, ischium, or pubis) they are located.
Landmarks also delimit maximum measurements of the acetabulum and obturator
foramen. Some points are discrete landmarks, while others are “fuzzy.” There are a few
points, such as the maximum horizontal and vertical diameters of the acetabulum, which
require measuring the points with a sliding caliper and marking them with a pencil prior
to digitizing. After data was collected, three landmarks were removed from the analysis
for reasons explained below. From this point forward, landmarks and their assigned
numbers reflect the configurations without these three discarded landmarks.
33
Bias was fairly limited in this study due to the use of the digitizer. The main issue
is the placement of landmarks. The landmarks were well-defined ahead of time and
repeated practice with the digitizer on a variety of ossa coxae prior to data collection
familiarized the researcher with the location of points on different innominates. Age and
sex of individuals were known to the analyst during data collection. Exercises to
measure intra-observer error were also performed months after data collection.
Microscribe® 3D digitizer
Materials
Modeling clay pillars (3), each approximately 4 inches in height
Sliding calipers
Pencil and eraser
Laptop computer equipped with the following:
o Microsoft Excel®
o Microscribe® Utility software v5.1 (Immersion Corporation 2008)
o MorphoJ (Klingenberg 2011)
Setup and Digitization
The majority of the 36 landmarks are locations that can be found visually (Figure
3.2). However, some need to be marked with a pencil prior to positioning the innominate
for digitization either because they require measurement or they are located in places that
are difficult to locate once the bone is secured in the proper position. The landmarks that
were marked ahead of time were the pubic symphysis (5), the points on the acetabular
rim that produce maximum horizontal and vertical diameters of the acetabulum (12, 13,
14 and 15), the acetabular point (16), the points on the ischium that produce maximum
width of the ischial tuberosity (17 and 18), the points on the obturator foramen that
produce the maximum breadth and length (19, 20, 21,and 22), the most posterior point on
34
the ischial tuberosity (30), and the most inferior point on the ischial tuberosity (31).
Details for finding these points are described below along with directions for locating the
other landmarks (Table 3.1).
Table 3.1. Landmarks.
# Landmark Additional Descriptions Mark
(Y/N)
1 Anterior Inferior Iliac
Spine
The most anteriorly-protruding point of the
spine N
2
Iliac Tubercle
Located where the iliac pillar and iliac crest
meet. If the tubercle is large, digitize the most
rugged, protruding surface around the midpoint
N
3 Anterior Superior Iliac
Spine
The most anteriorly-protruding point of the
spine N
4 Posterior Superior Iliac
Spine The posterior terminus of the iliac crest
N
5 Pubic Symphysis Midpoint of the symphysis Y
6
Obturator Groove
The midpoint of the region between the
curvatures of the lateral and medial aspects of
the superior pubic ramus
N
7 Posterior Inferior Iliac
Spine
The most medial and inferior protruding point
of the spine N
8 Pubic Tubercle The most superiorly protruding point on the
tubercle N
9 Apex inside the Greater
Sciatic Notch The point of maximum curvature
N
10 Point on the Acetabular rim directly inferior to
the Anterior Inferior Iliac Spine
N
11 Auricular Surface Apex N
12
Horizontal diameter of
acetabulum
(Anterior point)
Two points on the rim that produce the
maximum horizontal diameter of the
acetabulum
Y
13 (Posterior point)
35
Table 3.1. Continued.
#
Landmark
Additional Descriptions
Mark
(Y/N)
14
Vertical diameter of
acetabulum (Superior
point)
Two points on the Acetabular rim that produce
the maximum vertical diameter of the
acetabulum
Y
15 (Inferior point)
16 Acetabular Point Estimated by two lines at right angles to each
other across the acetabulum Y
17 Maximum width of the
Ischial tuberosity
(Lateral point)
Two points on the ischium that produce the
maximum width of the ischial tuberosity
Y
18 (Medial point)
19
Maximum breadth of the
obturator foramen
(Anterior point)
Two points on the obturator foramen rim that
produce the maximum breadth of the obturator
foramen without using the obturator groove
Y
20 (Posterior point)
21
Maximum length of the
obturator foramen
perpendicular to the
maximum breadth
(Superior point)
Two points on the obturator foramen rim that
produce the maximum length of the foramen
perpendicular to the maximum breadth
Y
22 (Inferior point)
23 The most medial point on the body of the pubis N
24
The tip of the inferior
acetabular lip
The most inferior point at the beginning of the
internal edge of the anterior rim of the
acetabulum
N
25 The most inferior point at the beginning of the internal edge of the
posterior rim of the acetabulum N
26 Ischiopubic ramus The midpoint of the narrowest diameter of the
ramus N
27 Inferior gluteal line Tuberosity near the iliac crest N
28
Anterior gluteal line
At the large foramen on the gluteal line; if no
foramen is present, digitize point of greatest
rugosity
N
36
Table 3.1. Continued.
#
Landmark
Additional Descriptions
Mark
(Y/N)
29
Posterior gluteal line
Superior to the superior posterior iliac spine;
generally found at the most inferior point of a
rugged triangular area
N
30 Posterior ischium Most posterior point on the ischial tuberosity Y
Inferior ischium Most inferior point on the ischial tuberosity Y
31 Superior point of the
pubic bone
Most superior point on the pubic bone at the
pubic symphysis Y
32 Superior point of the
pubic bone
Most superior point on the pubic bone at the
pubic symphysis Y
33 Inferior point of the
pubic bone
Most inferior point on the pubic bone at the
pubic symphysis Y
Figure 3.2. Landmarks.
37
29
6
28 24
27
25
Figure 3.3. Landmarks 6, 24, 25, 27, 28, and 29.
The inferior gluteal line was taken in the region below the iliac tubercle, at the
point of greatest rugosity (Figure 3.3). The landmark demarking the anterior gluteal line
was plotted at the large foramen generally found slightly posterior from the middle of the
lateral iliac surface. In cases where a foramen was not found, the most rugose point in
the region was taken. Similarly, the foramen with the most rugose surroundings was used
when more than one foramen was present. Lastly, in the region of the posterior gluteal
line, a triangle was often found. The landmark was taken at the most inferior point of the
38
triangle. In cases where the triangle was not distinguishable, the point was plotted at the
inferior end of the posterior gluteal line. These landmarks may differ from anatomical
definitions of the gluteal lines, but the points described above were the most consistently
found and were chosen for that reason.
In order to properly orient the innominate for digitizing, three clay pillars are
placed in a triangular position upon the working surface near the digitizer (Figure 3.4).
The acetabulum should face superiorly and the iliac crest will be away from the analyst.
The iliac fossa is placed face down on top of one of the pillars. The pillar will generally
sit towards the anterior superior iliac spine. Another pillar supports the iliopubic ramus
and is positioned directly lateral to the pubic symphysis. Be sure to avoid obscuring the
pubic tubercle and the medial margin of the pubic symphysis as these are both landmarks
that need to be digitized. The last pillar is placed near the posterior superior iliac spine in
the retroauricular region. The height and placement of the pillars may need to be
adjusted to ensure that all points are reachable with the digitizer stylus.
39
Figure 3.4. Setup for digitization (lateral and medial views).
If a point could not be attained in the process of digitizing an innominate, the
bone needed to be repositioned and the procedure would be restarted from the beginning.
Remember that once the innominate is moved, whether it is accidental or intentional, its
location in reference to the origin has shifted also. All the previously digitized points will
subsequently no longer correspond with any points taken at the new position and the
entire bone must be re-digitized. However, the process does not take a long time to
complete and therefore if there was any uncertainty about possible movement of the
element during data collection, it was re-digitized.
Some pressure was often required to secure the element onto the clay. Pushing
delicate or damaged areas of the bone into the clay was avoided, substituting a sturdier
portion of bone to be placed on the pillar when there was a potential to cause damage.
The individual innominates were all placed in the same general position in order to
40
consistently take measurements. For this study, data was directly inputted into a
Microsoft Excel® spreadsheet through the Microscribe® Utility Software v5.1
(Immersion Corporation 2008).
Landmark descriptions have been modified from Bytheway and Ross (2010) and
White (2000). One pitfall encountered throughout data collection was the differential
preservation of sample innominates. Data points for the ischial spine were taken, but
because a large portion of the samples had damaged or missing ischial spines (n=43), this
landmark was ultimately excluded from analysis. Large discrepancies were also found
when plotting the most prominent point along the arcuate line so this landmark was also
excluded. Lastly, the acetabular point was plotted twice for each individual (once as an
independent landmark and once as part of the pubic length). The second measurement of
the point was removed to avoid bias from overrepresentation during statistical analysis.
A complete list of the landmarks used by Bytheway and Ross (2010) is located in
Appendix A.
Individual identification numbers were modified from their original Bass Donated
Skeletal Collection numbers to include sex and age. For example, if individual #15-05D
is a female who was age 43 at death, the identification number would be 15-05D-F43.
Since the coordinates was gathered directly into a spreadsheet, the correspondence of
identification numbers to each individual’s set of data was easily maintained throughout
the data collection and analyses. Once properly formatted, data was imported into
MorphoJ (Klingenberg 2011). MorphoJ is a free software program created by Christian
41
Klingenberg for the geometric morphometric analysis of two- and three-dimensional
landmark data. It performs common procedures such as Procrustes superimposition,
principal components analysis, discriminant function analysis, and covariate analyses.
Previously published works such as González et al. (2009), Bytheway and Ross (2010),
Pretorius et al. (2006), Steyn et al. (2004), Oettlé et al. (2005), Slice (2007), Bookstein
(1997), Cramon-Taubadel et al. (2007), and Richtsmeier et al. (2002) also provide
background and guidance for analysis of geometric morphometric data.
Data Analysis
MorphoJ 1.05b (Klingenberg 2011) and SPSS (IBM Corporation 2011) were used
throughout data transformation and analysis. The first step in shape comparison was to
bring the information from each case onto a common coordinate system because when
the individual elements are digitized, the landmark coordinates are dependent upon the
placement of the innominate, and no two innominates were placed in exactly the same
position in space. After creating a new project and importing the dataset into MorphoJ,
the New Procrustes Fit could be run with the appropriate alignment method. The
Procrustes Fit brings all individual configurations onto a common coordinate system so
that variation between cases due to translation, reflection, rotation, and scaling are
removed (Cramon-Taubadel et al. 2007).
42
General Procrustes Analysis
Each individual’s arrangement of landmarks relative to one another is referred to
as its configuration. GPA reduces size, position, and orientation variation between
multiple configurations. GPA takes an individual configuration from the sample to be
designated as the initial target configuration. All other configurations are then fitted to
the target configuration using-least squares superimposition, thereby minimizing the sum
of the squares of the distances between corresponding points of configurations (Slice
2007). The average landmark coordinates among all configurations, including the target
configuration, becomes the consensus configuration. The consensus configuration takes
the place of the initial target configuration and all original configurations are fitted to it
and the average landmark coordinates are calculated again. If this new consensus
configuration varies greatly from the first, the procedure is repeated again (Klingenberg
2011). This calculation can be performed entirely by MorphoJ (Klingenberg 2011).
The coordinates of the original sample configurations were then superimposed
upon the consensus configuration. Plotted together, the original sample coordinates
cluster around the corresponding points on the consensus configuration and the tighter the
cluster is, the smaller the amount of variation is for a particular landmark. Figure 3.5 is
the set of Procrustes superimpositions from the study sample. The large dots indicate the
mean location for each landmark, with the cluster of scaled sample coordinates
surrounding it. There are three separate views of the superimposition because the data is
three-dimensional.
43
Figure 3.5. Procrustes superimposition.
From left, clockwise: Axes 1 vs. 2, 1 vs. 3,
and 2 vs. 3.
Principal Component Analysis
Prior to performing a principal component analysis, individual, sex, and age
classifiers for the dataset were established within the MorphoJ program. MorphoJ
(Klingenberg 2011) creates a covariance matrix for the Procrustes-transformed data,
followed by the PCA. PCAs can also be run for each sex, or any other classifiers,
individually. In order to do so, first the dataset must be subdivided by the appropriate
classifiers, in this case sex, resulting in a separate dataset for each sex. Both datasets
should be selected and a covariance matrix can be generated together from their
Procrustes coordinates. After covariance matrices are created for males and females,
MorphoJ (Klingenberg 2011) can produce corresponding PCAs.
44
The PCA breaks down variance due to independent factors represented by a
dataset’s axes. Each principal component (PC) accounts for a percentage of the overall
variance between cases and is calculated sequentially from highest percentage of variance
to the lowest until all variation is accounted for. Since size variation is removed during
Procrustes superimposition, the variance found for each PC will be a result of shape,
some of which likely can be accounted for by sexual dimorphism. Eigenvalues are
calculated, which are measurements of the amount of variance on each PC axis and
because PCs are determined successively, they are uncorrelated with one another
(Klingenberg and Zaklan 2000). Since each PC is an axis of variation, PC1 can be
thought of as the line of best fit and PC1 and PC2 together are considered the plane of
best fit. A plot of PC1 versus PC2, or any other pair of PCs, provides a scatter of PC
scores that can be color-coded by sex. Additionally, diagrams can be produced to depict
magnitude of variation per landmark that each principal component accounts for. The
vectors included in these diagrams indicate magnitude of variation, but are also arbitrary
in dimension and the 180o
reversal of all of the vectors together should be considered as
part of the landmark shift (Klingenberg and Zaklan 2000). The vector “lollipop” graphs
can also be adapted with wireframes of the structure, as seen in Figure 3.6. Results can
similarly be graphed for each sex (Figure 3.7). PC scores for individual cases are
measures of the distance from the axis to the individual configuration.
45
Figure 3.6. Wireframe of PC1. Black lines represent
shape changes of PC1 from the average shape (gray
lines).
Figure 1.7. Wireframes of male PC1 (Left) and female PC1 (right). The gray
represents the average shape and the black indicates the transformed landmarks of
PC1.
46
Independent Sample T-Test
In order to determine the significance of principal component scores in relation to
differentiating between sexes, independent sample t-tests were run for each of the 92
PCs. Levene’s Test for equal variance was first performed to determine whether equal
variance can be assumed for the male and female groups. A significance of less than 0.05
would indicate that there are unequal levels of variance and different tests must be used
to calculate the t-test. The results of each PC’s t-test indicate the level of significance
between the means of the two sex groups, with a p-value of 0.05 or less indicating that
the difference is significant.
Discriminant Function Analysis
Discriminant Function Analysis (DFA) is used to determine the shape features
that best differentiate two groups from one another, in this case males and females. In
order to compare shape, the sexes must have their own mean configurations. These
means were taken from the separate male and female Procrustes coordinates produced at
the beginning of the MorphoJ analysis. The amount of within-group variation affects the
amount of separation; therefore DFA must find the axis that spans the shortest amount of
within-group variation (Klingenberg 2011). The discriminant scores reflect the
maximum ratio of the distance between group shapes to the amount of within group
variation (Klingenberg 2011).
47
Biological morphometric data tends to be non-isotropic in nature, meaning that
the amount of variation found around each centroid landmark is not uniform within a
configuration. In order to properly measure the distance between groups, each
configuration being compared must be transformed so that the variation within each
group becomes isotropic. With isotropic configurations, the amount of within-group
variation is uniform and DFA can be performed simply by determining the greatest
distance between the shapes (Klingenberg and Monteiro 2005).
MorphoJ (Klingenberg 2011) produces a Mahalanobis distance from the DFA
procedure. This measurement indicates how well a discriminant function separates two
groups (Klingenberg 2011). The reliability of each discriminant function can be tested
through cross-validation. In this process, an observation is left out of the sample and
DFA is calculated without it. Then the discriminant score is computed for the left out
observation. The procedure is repeated for all of the observations in the dataset.
Modularity and Partial Least Squares Analysis
Modularity and integration are two concepts used in biology to acknowledge the
relative developmental independence of an organism’s parts while at the same time
recognizing that parts must coordinate with one another and be integrated throughout the
entire organism. In terms of the morphology of an organism, modularity is the
counterpart to morphological integration (Klingenberg 2008). While a module may be
highly integrated within its own structure, it remains relatively independent from other
modules. Integration is commonly tested in geometric morphometric studies through
48
methods such as principal components analysis. While PCA examines integration
patterns in the whole structure, partial least squares measures the amount of integration
between different parts within the structure (Klingenberg 2008).
In terms of the modularity of the innominate, it is known that three separate units
(the ilium, ischium, and pubis) develop independent of one another prior to fusion.
However, secondary ossification centers also develop, changing the morphology of the
original bones. In addition, the pelvis continues to grow after fusion, further increasing
integration between the ilium, ischium, and pubis regions as they grow with one another
as opposed to separately.
Partial Least Squares (PLS) analysis is used to compare covariation between two
blocks, either from different datasets or within a configuration. In this study, PLS was
used to analyze covariation between groups of landmarks representing different structures
within a configuration. The Procrustes configuration for the entire sample was used as
the configuration for the PLS analyses; therefore it must be taken into consideration that
the blocks have some degree of interdependence because of the effects of the original
Procrustes fit (Klingenberg 2011). Permutation tests were performed for each analysis
with the null hypothesis that the two blocks are completely independent of one another.
The RV coefficient produced by MorphoJ is a measure of the association between the
two blocks, with a value of 0 meaning that they are completely uncorrelated and a value
of 1 meaning that one set of data can be obtained from the other.
49
Figure 3.8. Superior and inferior blocks for PLS.
For the purposes of this study, landmarks were divided into ilium, ischium, pubis,
acetabulum, and obturator foramen regions. However, PLS can only be used to compare
two blocks so rather than splitting the pelvis into multiple structures, it was simply
divided into superior and inferior portions, consisting of 16 and 15 landmarks
respectively (Figure 3.8). Landmarks making up the superior block represent locations at
or superior to the pelvic inlet (1, 2, 3, 4, 7, 9, 10, 11, 12, 13, 14, 16, 24, 27, 28, and 29).
Conversely, the inferior block consists of landmarks at and inferior to the midplane (5, 6,
8, 15, 17, 18, 19, 20, 21, 22, 23, 25, 26, 30, 31, 32, and 33). PLS is similar to PCA in that
they both are organized as axes which successively account for covariation between
blocks. PLS also test against the null hypothesis that the two blocks are completely
independent of one another.
50
The PLS axes were also compared with the PC axes. This was done by
comparing the vector directions from the results of each of the analyses. For instance, the
PC1 axis was compared to PLS1, PC2 to PLS2, and so on, in order to determine whether
the same factors of shape variation within the entire innominate are correlated to the
highest amounts of covariation between the superior and inferior portions. Non-
numerically corresponding vectors were compared as well. MorphoJ performs such a test
that produces results in the form of angles between PC scores and PLS scores (0 to 90o).
It also tests against the null hypothesis that the vectors have random directions in the
shape tangent space (Klingenberg 2011).
There is also a modularity testing option available on MorphoJ. Contiguous or
non-contiguous landmarks can be grouped together into hypothesized modules and the
RV coefficient is then calculated between the groups. The multi-set RV coefficient is the
average of the RV coefficients between all pairs of landmark sets (Klingenberg 2009).
Additionally, the output provides an alternative partition that has the minimum multi-set
RV out of alternative partitions tested, based on the same number of groups that the
analyst runs. Various modules were tested for the entire dataset as well as for the female
and male subgroups. Only contiguous landmarks were considered for module groups and
quantities of module divisions included from two to 10 modules per hypothesis test.
Modules were first tested for the combined dataset and then the minimum covariation
results were applied to the separate sex datasets individually in order to determine
whether the modules were affected by sex.
51
Intraobserver Error
Precision of individual landmarks cannot be singled-out after GPA is performed
on a sample because the GPA takes landmark-level variation and spreads it out across the
entire configuration. Differences between highly variable landmarks are reduced during
this process and, in reverse, more precise landmarks will increase in variation. This is
referred to as the “Pinocchio Effect” (Cramon-Taubadel et al. 2007).
In order to determine the level of intraobserver error associated with the study, the
researcher digitized 15 innominates from the Boston University Forensic Anthropology
laboratory. No prior knowledge of each individual’s age or sex was known to the
researcher. Individuals were chosen based on completeness and left and right
innominates were utilized in order to enlarge the sample size. Two rounds of digitization
were performed for each individual, with several days separating each round.
Currently it is difficult to determine intraobserver error because the raw data from
each case cannot be directly compared to the others. All configurations must be
transformed onto a common coordinate system, resulting in new Procrustes coordinates
for each individual. The new configurations spread landmark-level variation between
points, as noted above, effectively skewing any sort of variation caused by intraobserver
error. One proposed way to work around this issue is to not remove the case from the
position it was digitized in between rounds (Cramon-Taubadel et al. 2007). This would
allow raw data to be compared since the specimen would not be moved from the original
coordinate system. However, this method would not allow the analyst to re-measure
52
landmarks prior to re-digitization. Ultimately, the dataset from the intra-observer tests
was not used in any analysis to quantify intraobserver error.
53
CHAPTER 4: RESULTS
Preliminary results
After performing the generalized Procrustes analysis, one outlier from the original
dataset was found. MorphoJ automatically removed this case from the sample as an
outlier (81-05D-M45), and it was not used in any further analyses. As noted above, the
ischial spine, arcuate line, and the second acetabular point were also removed. The
remaining 33 landmarks were renumbered and all were included in the subsequent
analyses.
Principle Components Analysis
Independent Sample T-Test
Results of the Levene’s test for equal variance indicate that four PC scores (PC1,
28, 39, and 70) had significantly unequal levels of variance between groups. They were
subsequently interpreted using the appropriate tests. The independent sample t-test
indicates that PC1 had the highest significance (p=0.000) in the t-test. Other PCs with
significant differences (p≤0.05) between the male and female means are PC4 and PC11
(Table 4.1). For this study, other PCs will not be looked at more closely as they were not
found to be significant factors for distinguishing sex.
The first principal component accounts for 13.311% of the variance, followed by
8.374, 7.606, and 7.113% for the second through fourth principal components. Over 98%
of the variation can be accounted for by the first 58 principal components (Figure 4.1).
54
Figures 4.2-4.4 display the shape changes related to PC1 of the Procrustes
coordinates for the entire sample. The vector diagrams indicate that there is very little
shape change in the regions of the acetabulum and the obturator foramen, as indicated by
the very short or nonexistent vectors emerging from the landmarks that represent these
areas. The pubic tubercle and apex of the greater sciatic notch also have minimal shape
changes in PC1.
Table 4.1. Independent Samples Test for PC scores. (Equal variances assumed
except PC1).
PC
Levene's
Test for
Equality of
Variances
t-test for Equality of Means
t
df
Sig. (2-
tailed)
Mean
Diff-
erence
Std.
Error
Diff-
erence
95% Confidence
Interval of the
Difference
F Sig. Lower Upper
1
4
11
4.226
1.499
2.314
.041
.223
.130
-17.769
2.695
-2.014
149.28
165.00
165.00
.000
.008
.046
-0.05727
0.01056
-0.00489
0.00322
0.00392
0.00243
-0.06364
0.00282
-0.00968
-0.05090
0.01829
-0.0001
7 1.650 .201 1.885 165.00 .061 0.00551 0.00292 -0.00026 0.01129
Figure 4.1. PCA eigenvalues.
55
The regions that show large amounts of change include a posterior shift of the
anterior superior and anterior inferior iliac spines; postero-medial shift of the posterior
superior and posterior inferior iliac spines and posterior gluteal line; and superior shifting
of the landmarks on the ischium. The pubis also shifts anteriorly. A scatterplot of PC1
versus PC2 (Figure 4.5) shows a distinction between males and females, with the
majority of males having a positive PC1 score and majority of females having a negative
PC1 score.
PC1 has the greatest distinction between male and female mean values, as
indicated by the above independent-sample t-test. Two other PC scores, PC4 and PC11,
also show significant differences in means between males and females. The strength of
Figure 4.2. PC1: axes 1 vs. 2.
56
dimorphism for each of these scores is indicated by their relatively lower eigenvalues and
percent variance in comparison to PC1.
Figure 4.3. PC1: axes 1 vs. 3.
Figure 4.4. PC1: axes 2 vs. 3.
57
PC4 accounts for 7.113% and PC11 accounts for 2.677% of the overall
variance. PC4 represents a large lateral shift of the anterior gluteal line along with
posterior shifts of points on the pubis, obturator foramen, acetabulum, anterior
superior and inferior iliac spines, and the greater sciatic notch. The ischial points
shift anteriorly (Figures 4.6-4.8).
Figure 4.5. PC1 vs. PC2. Note distinction between male and female PC1
values.
59
Figure 4.8. PC4: axes 2 vs. 3.
Figures 4.9-4.11 depict the shape changes of PC11. This PC indicates a posterior
shift of the anterior points on the acetabulum (landmarks 12 and 24). The anterior
superior iliac spine shifts inferiorly and the posterior point of the horizontal diameter of
the acetabulum moves antero-inferiorly. The anterior gluteal line shifts inward toward
the acetabulum while the apex of the auricular surface shifts away from it. The midpoint
of the pubic symphysis moves laterally and the most medial point on the body of the
pubis shifts antero-inferiorly.
61
Figure 4.11. PC11: axes 2 vs. 3.
According to the PCA results, the total variance of the dataset is 0.00927574. In
comparison, the total variance of the Female dataset is 0.00883521. PC1 from the
females accounts for 10.682% of the total variance within that group. The total variance
of the Male dataset is 0.00834064 and PC1 accounts for 10.898% of the variance between
the males. The PC1 for the female dataset is not necessarily the same as PC1 of the male
dataset or combined dataset. It represents the largest step in reducing shape variation
within a dataset. Over 98% of the variance is found in the first 46 PCs for females and
the first 49 PCs for males.
The PC1 plot of female Procrustes coordinates indicates fewer large shape
changes than depicted for PC1 of the entire dataset. The main shape changes are found in
the ilium, particularly the iliac tubercle, gluteal lines, and posterior superior and inferior
iliac spines. The posterior superior and inferior iliac spines and the posterior gluteal line
62
shift anteriorly while the iliac tubercle and inferior gluteal line shift superiorly and
posteriorly (Figure 4.12). Similarly in PC1 for the male Procrustes coordinates, larger
shifts occur in the positions of the posterior superior and inferior iliac spines, the gluteal
lines, and iliac tubercle (Figure 4.13).
Figure 4.12. Female PC1: axes 1 vs. 2.
Figure 4.13. Male PC1: axes 1 vs. 2.
63
Discriminant Function Analysis
The calculated Procrustes distance between the male and female means is
0.05942506. The T-square value is 2694.2649 with a p-value of <0.0001. The
Mahalanobis distance is 8.0659. The discriminant function properly allocated individuals
into the correct group for 100% of the cases (Figure 4.14). A cross-validation test was
performed with 1000 permutation runs. The Procrustes distance for the test is <0.0001
and the T-square is also <0.0001. Ninety-seven percent of the individuals were correctly
classified in the cross-validation test (Figure 4.14). Out of the 76 females included in the
sample, 71 were correctly classified (93.4%) and out of the 91 males, 87 were correctly
classified (95.6%).
Figure 4.14. Left: Discriminant scores. Right: Cross-validation scores.
64
Figure 4.15. Wireframe of discriminant analysis.
The gray indicates the female shape and black
indicates male.
In terms of shape variation between males and females, the anterior superior and
inferior iliac spines, iliac tubercle, and inferior gluteal line project farther antero-
superiorly in males (Figure 4.15). Conversely, the posterior superior and inferior iliac
spines and posterior gluteal lines project farther postero-superiorly in females. The pubic
symphysis also is extended anteriorly and laterally in females. Female landmarks on the
ischium are shifted together superiorly to the corresponding male points.
Partial Least Squares
The PLS tests were performed with the null hypothesis that the superior and
inferior blocks of landmarks are completely independent of one another. Using the
Procrustes coordinates for the entire dataset, the RV coefficient between blocks is
0.378551.
65
The permutation test (250 randomization rounds) resulted in a p<0.001, indicating
that the blocks are not independent of one another. PLS 1 accounted for 53.444% of the
total covariance and the first three PLS scores describe almost 80% of the covariance
between blocks (Figure 4.16). Figures 4.17-4.19 are difference vector diagrams of the
covariation between the superior and inferior blocks. There is an infero-medial shift of
the posterior superior and inferior iliac spines, infero-posterior shift of the iliac tubercle
and inferior gluteal line, posterior shifts of the pubic symphysis and an inferior shift of
the ischial tuberosity. A scatterplot of Block 1 PLS 1 versus Block 2 PLS 1 indicates that
females have higher Block 1 and Block 2 values than males (Figure 4.20). An
independent sample t-test was performed to determine significant differences in mean
PLS scores between males and females. Scores with a p-value close to or less than 0.05
are listed in Table 4.2. PLS1 Block1 and Block 2 are both significant (0.000). Block 2 of
PLS4, PLS7, and PLS13 also have significant differences in means between sexes.
Table 4.2. Independent Samples Test of PLS scores.
t-test for Equality of Means
Equal
Levene's Test
for Equality
Sig.
Mean
Std. Error
95% Confidence
Interval of the variances of Variances (2- Diff- Diff- Difference
assumed F Sig. T df tailed) erence erence Lower Upper
Block1 PLS1 1.111 .293 14.670 165 .000 0.04044 0.00276 0.035 0.04588
Block2 PLS1 2.363 .126 20.381 165 .000 0.04066 0.001995 0.03672 0.04460
Block2 PLS4 2.596 .109 -2.986 165 .003 -0.00736 0.00246 -0.01222 -0.00249
Block2 PLS7 1.992 .160 -2.077 165 .039 -0.00398 0.00191 -0.00776 -0.0002
Block2 PLS13 1.146 .286 2.008 165 .046 0.00259 0.0013 0.00004 0.00514
Block1 PLS4 3.302 .071 -1.919 165 .057 -0.00529 0.00276 -0.01073 0.00015
Block2 PLS3 3.327 .070 1.879 165 .062 0.00387 0.00206 -0.0002 0.00794
Block1 PLS2 3.274 .072 -1.870 165 .063 -0.00625 0.00334 -0.01284 0.00035
66
Figure 4.16. Total percent squared covariance between
Block 1 and Block 2 per PLS axis.
Figure 4.17. PLS1: axes 1 vs. 2. Block 1 in black
and Block 2 in gray.
67
Figure 4.18. PLS 1: axes 1 vs. 3. Block 1 in black and Block
2 in gray.
Figure 4.19. PLS1: axes 2 vs. 3. Block 1 in black and
Block 2 in gray.
A vector angle comparison of PLS and PC scores suggests similarities in the
variation accounted for by PC1 and PLS1. Testing against the hypothesis that the angle
between each PLS axis and PC axis is random, the p-value between PLS1 and PC1 is
<0.00001. The p-values between PLS2 and both PC2 and PC3 are <0.00001, as are the
68
p-values for PLS3 and these PC axes. See Appendix B for a complete list of vector angle
comparisons.
Figure 4.20. PLS1: Block 1 vs. Block 2.
Modularity hypothesis
Results for modularity were strongest when the landmarks were split into five
modules (Figure 4.21; Table 4.3). The multi-set RV coefficient for the entire dataset is
0.198093. For females this value is 0.176496 and for males it is 0.176358. Module A
consists of landmarks that make up the pubic symphysis and the inferior point of the
ischium. Module B consists of landmarks from the ischium, obturator foramen, and the
pubic tubercle. Module C encompasses the posterior portion of the ilium, including the
greater sciatic notch and auricular surface apex, as well as the iliac tubercle. Module D
consists of the anterior border of the ilium and the posterior and inferior points on the
69
acetabulum. The remaining points are grouped as module E and lie along a relatively
straight path spanning between the superior aspect of the obturator foramen and the
anterior gluteal line. These divisions provide the lowest levels of covariation between
modules that could be found from random partitions.
Figure 4.21. Modules.
Table 4.3. Modularity subsets.
Module Landmarks
A 5, 23, 26, 31, 32, 33
B 8, 17, 18, 19, 21, 22, 30
C 2, 4, 7, 9, 11, 29
D 1, 3, 10, 12, 13, 15, 27
E 6, 14, 16, 20, 24, 25, 28
70
CHAPTER 5: DISCUSSION
The results of the geometric morphometric analysis highlight the shape-specific
sexual dimorphism of the human innominates. After size was controlled for, shape
varied enough to be able to differentiate males and females from each other, although
some regions proved to be relatively unaffected by sex. For instance, there is relatively
little variation between sexes in the shapes of the acetabulum and the obturator foramen.
Bytheway and Ross (2010) reported similar results regarding the acetabulum and
obturator foramen.
Only three principal component scores were significantly different between sexes.
PC1 indicates, along with corresponding shape changes in the opposite direction, a large
postero-medial shift of the pubic symphysis and lengthening of the ischium. The
posterior superior and inferior iliac spines and posterior gluteal lines shift anteriorly,
along with smaller anterior shifts of the anterior superior and inferior iliac spines. There
is very little shape change at the apex of the greater sciatic notch, acetabulum, and
obturator foramen. Principal component 1 therefore consists of a shortening of the pubis;
lengthening of the ischium; and an anterior shift of the ilium, or conversely, a lengthening
of the pubis; shortening of the ischium; and posterior shift of the ilium.
Variation between a sharper subpubic angle in males and a wider subpubic angle
in females may be attributed in part to the inverse correlation between the pubis and
ischium noted above. Additionally, Budinoff and Tague (1990) ascribed the
development of the ventral arc to continued growth of the female pubis after fusion.
71
Lengthening of the pubis caused by continued growth after fusion would contribute to the
increased AP diameter found in females. Additionally, Coleman (1969) suggested that
the subpubic angle found in females is the result of differential directional growth of the
ischiopubic ramus and inferior border of the ischial tuberosity. While postero-superior
and antero-inferior shifts were found in the ischial tuberosity, variation of the ischiopubic
ramus was minimal; this combination would change the angularity of the subpubic
region.
Results of the independent sample t-test for the mean female and male PC scores
indicate that only three scores (PC1, PC4, and PC11) had significant sexual differences.
These three principal components account for over 23% of the total shape variance found
within the sample. In addition to PC1, PC4 depicts posterior shifts in the pubis and ilium
while the ischium moves anteriorly, shortening the distance from the pubic symphysis to
the ischial tuberosity. The anterior gluteal line shifts superiorly in PC11 and the pubic
symphysis shifts laterally. There is also a large antero-inferior shift of the anterior
superior iliac spine.
In addition to principal components analysis, discriminant function analysis was
used to test the strength of different factors in properly grouping individuals into one sex
or the other. A cross-validation test was able to classify males (95.6%) slightly better
than females (93.4%).
From partial least squares analysis, it was determined that PLS1 accounts for over
half of the covariation between blocks and that mean male and female PLS1 scores are
72
significantly different from one another. Block 2 (the inferior portion of the pelvis) was
also more distinguishable between sexes than Block 1. PCA spreads variation out
throughout the configuration, whereas PLS assesses covariation for two sets of data. In
both cases, groups of landmarks can be seen to shift in similar directions and act as units
to create shape variation. This can be observed particularly in the posterior ilium.
Additionally, a comparison of vector angles indicates that the shape changes of PC1
coincide strongly with PLS1. The axes PLS2 and 3 also correspond with axes PC2 and
PC3.
Five modules were distinguished from modularity testing (Figure 5.1). These
groupings of landmarks represent the lowest average levels of covariation between pairs
of modules, although they are not an overall measurement of the association among all
groups simultaneously (Klingenberg 2009). The modules separate the innominate into
the pubis (A); the ischium and obturator foramen (B); a posterior and superior portion of
the ilium (C); the acetabulum and anterior ilium (D); and the middle column of the ossa
coxae (E).
The significance of the arrangement within the entire dataset and the separated
sex datasets was tested by running alternate partitions and determining how many of the
alternate partitions had lower multi-set RVs than the hypothesis. Ten thousand partitions
were run for each dataset. For the entire dataset, two partitions were found with lower
RVs (proportion=0.0002). The proportion for females is 0.0031 and for males 0.0076.
73
Figure 5.1. Five modules of the innominate.
Each of these frequencies is at the far left tail-end of their corresponding RV coefficient
distributions, indicating that the subdivisions are distinct modules.
The modularity and PLS analyses indicate that the innominate is separable into
multiple components. Additionally, the landmarks representing these regions show
differing levels of variability. The acetabulum and obturator foramen display relatively
little shape variation between males and females, with higher levels of dimorphism found
in the lengths of the ischium and pubis and the placement of the anterior and posterior
iliac spines in an A-P plane.
74
There are many lessons that were learned from this study. Similar to other
osteological studies, as much background and supporting data should be gathered as
possible for each individual, because once the data is gathered, it is often difficult to go
back to re-examine the sample. In the case of geometric morphometrics, each specimen
is reduced to a configuration of landmarks. Landmark locations are helpful in
interpretation, but everything in between the points is lost unless photographs and/or
detailed notes are taken. While notes were taken regarding general pathological
conditions or degenerative change when observable, further documentation of the bones
would be helpful in future studies.
The landmarks used in this study were not originally created by the author, but
compiled from a previous study by Bytheway and Ross (2010). The landmarks offer a
reasonable generalized shape of the pelvis and provided enough data to compare shape
variation between populations in the original study. For a large-scale study of sexual
dimorphism within a population, these landmarks provide enough basic data to compare
predominant structures. For subsequent studies, the areas that have been determined to
have greater shape variation can be honed in on and more landmarks can be created to
examine the finer details of the shape variation. This could be of particular use in
forensic or archaeological cases where remains are fragmented or otherwise incomplete.
The gluteal line landmarks were inexact and although included in analysis, they
contributed to a large degree of variation that was not sex-specific. A new Procrustes
superimposition was created after removing the three gluteal line landmarks (27, 28, and
75
29) from the dataset. Independent sample t-tests of the PC scores from the resulting PCA
indicated that only two PC axes were significantly different between the male and female
means. Because Procrustes analysis spreads out landmark-specific variation across the
entire configuration, including such imprecise landmarks as gluteal landmarks would
skew the amount of within-sex variation. Future uses of geometric morphometrics for
generating biological profile information from skeletal remains should therefore be
directed to landmarks that are more precise, in particular Type I or Type II landmarks.
Landmarks should be representative of shape variation between groups, while having
minimal within-group variation.
A potentially major source of information was lost due to differential preservation
of the ischial spine. Data was collected for the ischial spine for each of the elements,
regardless of whether they were damaged or whole, but the landmark was ultimately
dropped from analysis because such a large portion of the sample was damaged. The
medial projection of the ischial spine puts the greatest constraint on the pelvic canal at the
level of the midplane. For this reason, data regarding potential shape variation of this
region may be important to sex determination. The lack of preserved ischial spines may
also reflect its preservation levels in real-life scenarios and therefore even if information
were available, it would not be readily applicable except in cases of exceptional
preservation.
This study also purposely controlled the age range of the sample because of the
shape changes that have been documented in adult innominates (Rissech and Malgosa
76
2007). Older individuals exhibit degenerative changes that may alter the surface of the
bone or the overall shape of structures. Indeed, these changes are what make age
estimation from the innominates possible. On the other hand, the innominates of the
young continue to grow and restructure after ilium, ischium, and pubis have fused. The
age range included in this study (30-65 years) did not seem to encompass drastic changes
due to age. A broader age range would be better suited for a study regarding the effects
of age on the shape of the innominates. Additionally, a geometric morphometric study of
the juvenile and young adult pelvic bones would be advantageous to understanding the
differentiation of shape that occurs at the time of puberty between males and females.
However, the main problem with studies of juveniles is a paucity of samples. Another
factor to be considered is secular change. As juveniles reach puberty at a younger age
now than in the past, do all systems similarly mature earlier?
77
CHAPTER 6: CONCLUSION
This study is an addition to the growing assemblage of geometric morphometric
inquiries applied to human skeletal remains. While software has been developed within
forensic anthropology for classification of 3-D data from unknown skulls into reference
groups (i.e., 3D-ID; Slice and Ross 2009), study of other skeletal structures has been
relatively minimal. Further exploration of shapes in the human skeleton and thorough
documentation of methods will promote the use of geometric morphometrics among
anthropologists.
The pelvis is generally accepted to be the most sexually dimorphic part of the
human skeleton. Results from this study indicate that some parts of the innominates
indeed vary between males and females, while other regions are similar. PC1 had the
highest significance level of inter-sexual variation. Shape changes of this component
include lengthening of the pubis as well as posterior movement of the posterior superior
and posterior inferior iliac spines, which would effectively widen the distance between
the anterior and posterior medial margins of the pelvis. Additionally, the female ischium
shifts superiorly. These distinctions were also found through discriminant function
analysis to be strong classifiers between male and female innominates.
Previous research suggests that parts of the female pelvis may change in shape in
order to accommodate large-headed infants, making it possible for small-bodied females
to give birth with similar degrees of effort as larger-bodied females (Kurki 2007, 2013).
Intra-sexual variation proved to be just as strong in females as in males if not slightly
78
stronger, contrary to the idea that overall dimensions are somehow protected or canalized
in females. Intra-sexual variation in both females and males tends to focus on the shape
of the ilium.
Geometric morphometric analysis of other samples would improve understanding
of how the shapes of specific regions are affected by population and environment. Future
investigations may test whether the areas of high dimorphism found in this study translate
equally well to other samples. Additionally, the question arises of how to apply results of
this study to methods of sex determination. Although largely descriptive in nature, the
results can lead to more focused studies and direct metric or morphological analyses
toward regions of higher dimorphism.
79
APPENDIX A: Bytheway and Ross (2010) landmarks
The following are the original landmarks and citations listed in the article from
which the landmarks in this study were derived.
Table A.1. Landmarks and descriptions.
# Landmark
1 Anterior inferior iliac spine
2 Ischial spine
3 Iliac tubercle
4 Anterior superior iliac spine
5 Posterior superior iliac spine
6 Pubic symphysis
7 Obturator groove
8 Posterior inferior iliac spine
9 Pubic tubercle
10 Apex inside greater sciatic notch/maximum curvature point
11 Directly inferior to the anterior inferior iliac spine to a point on the
acetabular rim
12 Auricular surface apex (Seidler 1980)
13-14 The two points on the acetabular rim that produce the maximum
horizontal diameter of the acetabulum
15-16 The two points on the acetabular rim that produce the maximum
vertical diameter of the acetabulum
17 The acetabular point (“Found by drawing two lines at right angles to
each other across the acetabulum”) (Lele and Richtsmeier 2001)
18-19 The two points on the ischium that produce maximum width of the
ischial tuberosity (Steudel 1981)
20-21 The two points on the obturator foramen rim that produce the
maximum breadth of the obturator foramen (perpendicular to the line
of maximum length) (Coleman 1969) without using the obturator
groove
22-23 The two points on the obturator foramen rim that produce maximum
length of the obturator foramen (Coleman 1969)
24-25 The two points that produce pubic length (using the acetabular point
to “the most medial point on the body of the pubis”) (Steudel 1981)
26 The tip of the inferior acetabular lip (Coleman 1969) (the most
inferior point at the beginning of the internal edge of the anterior rim
of the acetabulum)
80
Table A.1. Continued.
27 The most inferior point at the beginning of the internal edge of the
posterior rim of the acetabulum 28 Arcuate (iliopubic) eminence
29 Ischiopubic ramus---at the narrowest point inferior to the pubic
symphysis
30 Inferior gluteal line---directly above #11 on the gluteal line 31 Anterior gluteal line---at or near the large foramen on the gluteal line
32 Posterior gluteal line---directly superior to the posterior superior iliac
spine on the gluteal line
33 Most posterior point on the ischial tuberosity
34 Most inferior point on the ischial tuberosity
35 Most superior point on the pubic bone at symphysis
36 Most inferior point on the pubic bone at symphysis
81
APPENDIX B: Angular comparison of PC and PLS vectors
P-values (Parametric)
Table B.1. P-values: PC (all) vs. PLS1-PLS7.
PLS1 PLS2 PLS3 PLS4 PLS5 PLS6 PLS7
PC1 <.00001 0.41763 0.27809 0.86663 0.78792 0.96131 0.53496
PC2 0.2655 <.00001 <.00001 0.31319 0.46646 0.00118 0.38814
PC3 0.5327 <.00001 <.00001 0.06365 0.75581 0.1524 0.03494
PC4 0.2768 0.00209 0.19728 <.00001 0.37228 0.00112 0.08079
PC5 0.9506 0.534 0.00117 0.21002 0.00028 0.30891 <.00001
PC6 0.3942 0.71658 0.00318 <.00001 0.07074 0.00024 0.15054
PC7 0.7226 0.56936 0.00298 0.64979 <.00001 0.05902 0.01082
PC8 0.9526 0.8535 0.79422 0.13466 0.00658 0.41996 0.83642
PC9 0.8592 0.25992 0.52969 0.22383 0.01717 <.00001 0.03715
PC10 0.958 0.83285 0.64106 0.32014 0.10386 0.24839 0.00003
PC11 0.7677 0.75075 0.16791 0.87249 0.4715 0.9744 0.0003
PC12 0.8618 0.54874 0.59486 0.50547 0.32238 0.06413 0.48287
PC13 0.9673 0.81347 0.52519 0.93676 0.59612 0.90177 0.74106
PC14 0.8701 0.9007 0.69632 0.2997 0.52612 0.60537 0.07917
PC15 0.9998 0.58622 0.81257 0.59984 0.24569 0.08496 0.16601
PC16 0.9733 0.74895 0.87137 0.40041 0.30449 0.02874 0.53793
PC17 0.973 0.66766 0.9158 0.32864 0.69739 0.83948 0.49038
PC18 0.9923 0.91307 0.98791 0.85978 0.94772 0.42151 0.32216
PC19 0.9378 0.8796 0.57268 0.41945 0.84873 0.37395 0.89511
PC20 0.9441 0.8713 0.9357 0.74103 0.80445 0.98052 0.47129
PC21 0.9346 0.99661 0.75077 0.70547 0.79147 0.34724 0.97657
PC22 0.993 0.9322 0.86488 0.94291 0.81057 0.8637 0.48657
PC23 0.9626 0.68201 0.91897 0.73968 0.74275 0.89496 0.5174
PC24 0.8543 0.99219 0.99141 0.476 0.74037 0.8256 0.97782
PC25 0.9941 0.96165 0.89492 0.63045 0.80864 0.94246 0.20207
PC26 0.9174 0.91136 0.68316 0.91027 0.72452 0.21673 0.78085
PC27 0.9308 0.97975 0.79737 0.64044 0.69107 0.76548 0.92511
PC28 0.9547 0.88635 0.88377 0.59431 0.45591 0.71751 0.66219
PC29 0.9948 0.79107 0.79952 0.57611 0.79559 0.90133 0.81479
PC30 0.8949 0.82682 0.86256 0.88694 0.69714 0.84793 0.63011
PC31 0.896 0.9116 0.93176 0.83038 0.9798 0.38795 0.99145
82
Table B.1. Continued.
PLS1 PLS2 PLS3 PLS4 PLS5 PLS6 PLS7
PC32 0.9224 0.75274 0.91353 0.94623 0.6858 0.9047 0.88284
PC33 0.8291 0.92483 0.77587 0.77947 0.64203 0.81029 0.89991
PC34 0.9554 0.90911 0.88562 0.95177 0.65921 0.52067 0.93443
PC35 0.9911 0.98759 0.88415 0.73855 0.73755 0.81933 0.95611
PC36 0.9227 0.8807 0.99776 0.98454 0.73204 0.37206 0.74286
PC37 0.9675 0.92635 0.86761 0.80186 0.88092 0.77904 0.91559
PC38 0.8188 0.93602 0.88935 0.83519 0.96622 0.75931 0.91118
PC39 0.9819 0.90141 0.53885 0.97875 0.84051 0.79861 0.62533
PC40 0.9573 0.97627 0.97996 0.90347 0.81308 0.98981 0.90913
PC41 0.9315 0.91857 0.97069 0.9109 0.85203 0.8947 0.86234
PC42 0.9937 0.95588 0.79785 0.89338 0.94679 0.64645 0.77232
PC43 0.9499 0.94893 0.93836 0.86658 0.88905 0.91837 0.63231
PC44 0.9576 0.90646 0.82789 0.84345 0.82363 0.81812 0.80876
PC45 0.9654 0.97199 0.78691 0.90562 0.99498 0.74517 0.69587
PC46 0.9502 0.8374 0.90187 0.83635 0.75453 0.77466 0.83009
PC47 0.9808 0.8633 0.83461 0.95908 0.75651 0.95577 0.81594
PC48 0.9318 0.96874 0.83492 0.89276 0.78405 0.93943 0.58136
PC49 0.9037 0.86091 0.84804 0.94835 0.74082 0.87834 0.95589
PC50 0.9938 0.81592 0.83911 0.85811 0.54322 0.7244 0.64863
PC51 0.9785 0.96401 0.99612 0.72963 0.79645 0.7473 0.8844
PC52 0.9692 0.95157 0.99166 0.95001 0.99574 0.91233 0.71955
PC53 0.9894 0.81143 0.7698 0.88833 0.79457 0.50682 0.54352
PC54 0.9464 0.90261 0.94339 0.77006 0.8111 0.99529 0.86723
PC55 0.8771 0.98015 0.67518 0.93149 0.86978 0.60305 0.42078
PC56 0.9802 0.94761 0.92126 0.85549 0.74175 0.67484 0.72054
PC57 0.839 0.88529 0.86763 0.7341 0.7406 0.97835 0.83869
PC58 0.9553 0.87886 0.86288 0.87472 0.86105 0.89798 0.74268
PC59 0.9624 0.92233 0.88694 0.84713 0.69079 0.95909 0.96727
PC60 0.9165 0.9984 0.9572 0.82046 0.95259 0.80218 0.99898
PC61 0.9796 0.99052 0.94189 0.97433 0.89675 0.94343 0.91484
PC62 0.9609 0.94254 0.86087 0.9618 0.72384 0.982 0.99372
PC63 0.9936 0.92785 0.84209 0.90272 0.98991 0.82458 0.91482
PC64 0.9685 0.95538 0.95871 0.96487 0.88788 0.85467 0.86018
PC65 0.9215 0.86614 0.96568 0.77872 0.8996 0.68029 0.81505
83
Table B.1. Continued.
PLS1 PLS2 PLS3 PLS4 PLS5 PLS6 PLS7
PC66 0.9814 0.9215 0.88869 0.87397 0.84727 0.98675 0.5896
PC67 0.9692 0.97589 0.79163 0.87678 0.84295 0.66669 0.67199
PC68 0.9324 0.93507 0.98563 0.92588 0.94773 0.59969 0.78338
PC69 0.9465 0.97948 0.90592 0.87602 0.94025 0.92782 0.89131
PC70 0.9378 0.92642 0.92763 0.98827 0.81474 0.95516 0.87458
PC71 0.9944 0.91055 0.87984 0.99602 0.84992 0.93309 0.92433
PC72 0.941 0.85171 0.93826 0.98284 0.85892 0.99988 0.69279
PC73 0.9346 0.81306 0.99069 0.94292 0.75588 0.91692 0.92944
PC74 0.9839 0.91884 0.98127 0.89442 0.96822 0.97566 0.74953
PC75 0.9793 0.96624 0.88682 0.79577 0.98268 0.96513 0.90722
PC76 0.956 0.92991 0.88186 0.94851 0.86765 0.83276 0.9352
PC77 0.9661 0.98266 0.86083 0.80833 0.97029 0.80176 0.89221
PC78 0.9805 0.96236 0.97886 0.94989 0.9437 0.89011 0.98844
PC79 0.9766 0.93192 0.97039 0.84336 0.9149 0.99247 0.99748
PC80 0.9599 0.92885 0.94021 0.89972 0.89467 0.96591 0.79621
PC81 0.9854 0.97777 0.96754 0.94989 0.98367 0.8843 0.95543
PC82 0.9885 0.91021 0.90086 0.77171 0.89453 0.96319 0.69508
PC83 0.983 0.87907 0.90891 0.96573 0.84269 0.8285 0.72922
PC84 0.9479 0.93762 0.95307 0.85771 0.99427 0.71829 0.75281
PC85 0.9707 0.87757 0.98927 0.82009 0.93247 0.9079 0.70942
PC86 0.9595 0.95933 0.84194 0.85066 0.84257 0.83669 0.50916
PC87 0.9597 0.84436 0.98883 0.97138 0.81871 0.99057 0.85321
PC88 0.9937 0.95882 0.93282 0.99156 0.89633 0.79074 0.92584
PC89 0.9333 0.94918 0.92193 0.96505 0.94225 0.78229 0.92089
PC90 0.9917 0.99745 0.90369 0.94517 0.99528 0.82667 0.99484
PC91 0.9593 0.98806 0.95855 0.95708 0.96252 0.9542 0.78912
PC92 0.9003 0.90365 0.85235 0.87438 0.9161 0.96253 0.4969
84 7i90
Table B.2. P-values: PC (all) vs. PLS8-PLS14.
PLS8 PLS9 PLS10 PLS11 PLS12 PLS13 PLS14
PC1 0.8282 0.8647 0.50487 0.96574 0.93458 0.90165 0.8636
PC2 0.476 0.8397 0.89414 0.61639 0.00755 0.75856 0.50348
PC3 0.4709 0.92116 0.10056 0.84807 0.16211 0.14034 0.27261
PC4 0.5075 0.67788 0.04631 0.73988 0.00013 0.69392 0.81597
PC5 0.0362 0.14186 0.00455 0.18268 0.35309 0.00209 0.72012
PC6 0.0651 0.45627 0.26623 0.78044 0.00796 0.49963 0.75726
PC7 0.1889 0.83141 0.64053 0.4766 0.04626 0.72755 0.13969
PC8 8E-05 <.00001 0.09626 0.05161 0.09031 0.44305 0.09082
PC9 3E-05 0.8826 0.53617 0.2123 0.0012 0.1563 0.11621
PC10 0.5159 <.00001 0.00139 0.66552 0.60465 0.34735 0.10271
PC11 0.0436 0.02471 <.00001 0.78703 0.02166 0.61287 0.72654
PC12 <.00001 0.00036 0.35886 0.72466 0.12813 0.00042 0.11097
PC13 0.0315 0.18805 0.50748 <.00001 0.26393 0.22446 0.96997
PC14 0.9664 0.70161 0.31492 0.96596 0.81075 0.82586 <.00001
PC15 0.1142 0.16674 0.18845 0.80841 0.02978 <.00001 0.5034
PC16 0.8682 0.12207 0.63538 0.01585 0.0006 0.33644 0.00047
PC17 0.0919 0.97317 0.00005 0.42765 0.32053 0.70807 0.49394
PC18 0.6452 0.46403 0.84101 0.4619 0.70627 0.37112 0.02181
PC19 0.9285 0.89063 0.81317 0.55325 0.21321 0.08561 0.30351
PC20 0.5292 0.53862 0.95912 0.22741 0.30813 0.25532 0.40686
PC21 0.8657 0.28391 0.03211 0.91932 0.9609 0.71591 0.09842
PC22 0.6394 0.7071 0.20264 0.05367 0.89048 0.13406 0.64669
PC23 0.7906 0.46607 0.52148 0.76984 0.66099 0.449 0.06692
PC24 0.661 0.7275 0.93322 0.092 0.8802 0.79724 0.78076
PC25 0.1059 0.29482 0.71634 0.88646 0.28169 0.97896 0.01216
PC26 0.7122 0.82775 0.75667 0.62274 0.72361 0.586 0.68963
PC27 0.9266 0.34961 0.39587 0.88342 0.6292 0.83998 0.38621
PC28 0.5259 0.82864 0.81726 0.63414 0.73348 0.58389 0.65967
PC29 0.3317 0.63972 0.76698 0.69395 0.60657 0.08151 0.72841
PC30 0.8342 0.78166 0.81961 0.72393 0.89915 0.54463 0.41313
PC31 0.8166 0.65139 0.89977 0.81272 0.62075 0.47403 0.28418
PC32 0.8626 0.84172 0.79614 0.88907 0.92957 0.86188 0.43337
PC33 0.3409 0.87425 0.92797 0.25469 0.74944 0.94551 0.24504
PC34 0.6627 0.77783 0.67419 0.68037 0.9919 0.62537 0.25684
PC35 0.8817 0.53832 0.97038 0.69627 0.77777 0.8045 0.86725
85 7i90
Table B.2. Continued.
PLS8 PLS9 PLS10 PLS11 PLS12 PLS13 PLS14
PC36 0.4595 0.64339 0.73506 0.72468 0.44833 0.79349 0.50009
PC37 0.9127 0.84518 0.69109 0.75348 0.89838 0.38149 0.56224
PC38 0.8967 0.88417 0.80838 0.86968 0.93791 0.952 0.90987
PC39 0.7845 0.78807 0.90177 0.78214 0.76202 0.76909 0.84416
PC40 0.617 0.79706 0.57286 0.32644 0.99002 0.67494 0.52571
PC41 0.5942 0.95506 0.35519 0.94067 0.95618 0.4169 0.95843
PC42 0.7825 0.79916 0.69536 0.74947 0.66013 0.85745 0.97646
PC43 0.8449 0.90539 0.72201 0.48664 0.76731 0.75753 0.57764
PC44 0.899 0.82043 0.48895 0.59077 0.28289 0.7858 0.67628
PC45 0.8698 0.74241 0.94114 0.88176 0.91591 0.88868 0.82139
PC46 0.4387 0.88824 0.78675 0.98534 0.32339 0.95827 0.87272
PC47 0.8467 0.73358 0.58371 0.92216 0.93561 0.5305 0.55222
PC48 0.6294 0.41767 0.78437 0.51042 0.53735 0.69886 0.8323
PC49 0.8539 0.98697 0.89393 0.5941 0.56703 0.66024 0.87294
PC50 0.8355 0.88348 0.98067 0.71055 0.65411 0.73959 0.7065
PC51 0.8725 0.81499 0.53213 0.94962 0.62235 0.95425 0.73973
PC52 0.888 0.61654 0.78158 0.79021 0.96652 0.99624 0.616
PC53 0.8546 0.59619 0.82868 0.73032 0.7418 0.61972 0.59928
PC54 0.7618 0.80435 0.27244 0.91097 0.88374 0.57123 0.85073
PC55 0.7527 0.48955 0.76269 0.64154 0.75857 0.86318 0.95108
PC56 0.8148 0.65329 0.89439 0.70754 0.7059 0.79268 0.55771
PC57 0.5438 0.92418 0.85546 0.98004 0.77548 0.54703 0.95382
PC58 0.971 0.73732 0.48066 0.8613 0.39595 0.82912 0.79502
PC59 0.7132 0.67971 0.89644 0.91537 0.7951 0.45922 0.47069
PC60 0.7814 0.95492 0.74482 0.89069 0.31852 0.87557 0.81272
PC61 0.7706 0.74178 0.77235 0.85742 0.88798 0.78933 0.64173
PC62 0.7603 0.82294 0.94016 0.89065 0.99141 0.95891 0.77658
PC63 0.9747 0.86187 0.94453 0.82656 0.90239 0.91005 0.54211
PC64 0.9168 0.68711 0.81903 0.93186 0.81437 0.92194 0.96721
PC65 0.8843 0.91598 0.88585 0.81982 0.80681 0.8484 0.65018
PC66 0.6793 0.97212 0.74774 0.86424 0.93805 0.73285 0.71116
PC67 0.6946 0.92095 0.55647 0.87136 0.94266 0.951 0.98496
PC68 0.9583 0.6942 0.69422 0.95788 0.98192 0.84311 0.56786
86 7i90
Table B.2. Continued.
PLS8 PLS9 PLS10 PLS11 PLS12 PLS13 PLS14
PC69 0.831 0.84403 0.88681 0.82491 0.94655 0.54275 0.85483
PC70 0.6817 0.99588 0.92308 0.79273 0.7929 0.78273 0.85759
PC71 0.9686 0.98883 0.82829 0.80934 0.86586 0.77077 0.59715
PC72 0.8093 0.60929 0.8082 0.88482 0.80149 0.92602 0.82201
PC73 0.8815 0.60318 0.8673 0.86578 0.67627 0.77754 0.79557
PC74 0.8496 0.89998 0.82105 0.98514 0.87061 0.81674 0.8313
PC75 0.7761 0.97618 0.84088 0.81027 0.91595 0.58495 0.85991
PC76 0.9147 0.89226 0.80761 0.98316 0.82494 0.84955 0.63458
PC77 0.9848 0.7907 0.84318 0.72643 0.80455 0.73713 0.83192
PC78 0.9378 0.95884 0.90153 0.82777 0.75728 0.7853 0.84014
PC79 0.7809 0.69981 0.76036 0.86791 0.9359 0.70523 0.72118
PC80 0.9028 0.83906 0.66569 0.86526 0.99441 0.81246 0.98288
PC81 0.9608 0.97356 0.99466 0.9645 0.90198 0.93885 0.75257
PC82 0.8784 0.74352 0.79959 0.89615 0.87787 0.76665 0.89196
PC83 0.8968 0.71548 0.8566 0.97459 0.92476 0.93541 0.8295
PC84 0.8895 0.96864 0.96909 0.8817 0.9783 0.9258 0.96309
PC85 0.9458 0.86982 0.72929 0.8215 0.88585 0.70852 0.88856
PC86 0.6522 0.76815 0.85276 0.93096 0.44093 0.91193 0.74804
PC87 0.7845 0.73772 0.76973 0.84509 0.99908 0.98159 0.81165
PC88 0.5671 0.80424 0.91722 0.94121 0.62487 0.74735 0.67919
PC89 0.5847 0.79499 0.93955 0.83937 0.71312 0.89332 0.84082
PC90 0.9277 0.98933 0.76853 0.96201 0.66242 0.72916 0.99861
PC91 0.9385 0.83997 0.99728 0.93353 0.68551 0.92967 0.79639
PC92 0.9621 0.97231 0.9761 0.76087 0.46662 0.96856 0.50183
Table B.3. P-values: PC (all) vs. PLS15-PLS21.
PLS15 PLS16 PLS17 PLS18 PLS19 PLS20 PLS21
PC1 0.55761 0.92451 0.8679 0.87265 0.97348 0.93778 0.89694
PC2 0.98382 0.65806 0.90564 0.94018 0.81671 0.94893 0.91955
PC3 0.46742 0.87267 0.92286 0.54578 0.45158 0.83953 0.7042
PC4 0.11425 0.53844 0.37301 0.74616 0.78913 0.97357 0.48649
PC5 0.23894 0.35302 0.51925 0.53324 0.23552 0.29612 0.76557
87 7i90
Table B.3. Continued.
PLS15 PLS16 PLS17 PLS18 PLS19 PLS20 PLS21
PC6 0.40892 0.82697 0.95185 0.92033 0.61944 0.86309 0.63516
PC7 0.767 0.68536 0.80235 0.50621 0.50429 0.84178 0.42497
PC8 0.61116 0.55587 0.79189 0.74752 0.7356 0.68174 0.7613
PC9 0.70898 0.10859 0.48991 0.64896 0.77069 0.83091 0.85925
PC10 0.72808 0.20172 0.06254 0.48471 0.34428 0.94851 0.53049
PC11 0.00003 0.06903 0.85824 0.96246 0.80973 0.83693 0.87236
PC12 0.09298 0.2368 0.20414 0.26776 0.10686 0.86466 0.57509
PC13 0.96053 0.8998 0.38771 0.78067 0.6417 0.6785 0.12466
PC14 0.21279 0.00694 <.00001 0.70474 0.48664 0.36695 0.73485
PC15 0.12152 0.74383 0.33008 0.32102 0.6358 0.40565 0.01557
PC16 0.59756 0.007 0.03866 0.24589 0.26651 0.36301 0.08756
PC17 <.00001 0.00769 0.23796 0.44767 0.70814 0.53649 0.21126
PC18 0.19084 0.00009 0.12415 0.41402 0.75624 0.19454 0.00686
PC19 0.27312 0.21829 0.00017 0.25774 0.00287 0.00001 0.04793
PC20 0.52234 0.03448 0.17302 <.00001 0.00537 0.25718 0.00008
PC21 0.18586 0.00016 0.22771 0.00159 0.72312 0.17347 0.67364
PC22 0.21243 0.19529 0.86892 0.05338 0.00021 0.00002 0.60403
PC23 0.20793 0.33791 0.14991 0.03436 0.26904 0.00828 0.00003
PC24 0.27497 0.65866 0.42017 0.02454 0.03929 0.45265 0.09482
PC25 0.27221 0.67153 0.16071 0.29043 0.16798 0.16866 0.25713
PC26 0.92582 0.47834 0.52466 0.02444 0.3367 0.30458 0.33295
PC27 0.6764 0.64381 0.04193 0.1178 0.87358 0.09441 0.40326
PC28 0.12608 0.12612 0.16519 0.00107 0.17349 0.10758 0.64763
PC29 0.15115 0.80376 0.33833 0.40487 <.00001 0.0237 0.31309
PC30 0.07057 0.46963 0.603 0.81434 0.19754 0.25513 0.69601
PC31 0.80233 0.08933 0.13665 0.4551 0.71464 0.82019 0.44293
PC32 0.74825 0.24514 0.41813 0.2666 0.63903 0.01446 0.62096
PC33 0.81632 0.46937 0.36766 0.75682 0.95027 0.75627 0.10137
PC34 0.66987 0.35743 0.52327 0.67417 0.28388 0.86617 0.14091
PC35 0.93908 0.85476 0.24362 0.71994 0.64629 0.46273 0.39084
PC36 0.99377 0.83206 0.09606 0.87554 0.63535 0.302 0.20812
PC37 0.36863 0.62277 0.75187 0.73077 0.22342 0.66881 0.73316
PC38 0.8402 0.62454 0.37769 0.82241 0.44777 0.17164 0.55792
PC39 0.94543 0.97708 0.20458 0.85635 0.79931 0.13528 0.83335
88 7i90
Table B.3. Continued.
PLS15 PLS16 PLS17 PLS18 PLS19 PLS20 PLS21
PC40 0.71406 0.8136 0.53845 0.60326 0.91817 0.9089 0.42046
PC41 0.73987 0.82496 0.69839 0.44416 0.55799 0.78236 0.22717
PC42 0.83173 0.69294 0.66075 0.30907 0.73496 0.71882 0.63726
PC43 0.98471 0.4381 0.87492 0.46899 0.77626 0.66433 0.79794
PC44 0.37608 0.41253 0.64925 0.23153 0.73674 0.92063 0.86933
PC45 0.68958 0.65562 0.44635 0.31408 0.52318 0.45722 0.45259
PC46 0.95941 0.30491 0.88294 0.96687 0.34084 0.31303 0.87587
PC47 0.3121 0.92337 0.86944 0.9177 0.54759 0.57679 0.43447
PC48 0.51556 0.96197 0.4914 0.89422 0.1017 0.22393 0.32829
PC49 0.92474 0.74572 0.93762 0.91415 0.43588 0.93925 0.9158
PC50 0.42462 0.86556 0.72196 0.4225 0.82698 0.71763 0.83721
PC51 0.93592 0.55292 0.99131 0.90379 0.57629 0.4981 0.67516
PC52 0.34401 0.40282 0.7077 0.94861 0.9185 0.48124 0.82361
PC53 0.4761 0.38704 0.80379 0.78561 0.95814 0.53919 0.95465
PC54 0.61476 0.70227 0.99786 0.51053 0.6945 0.74064 0.9101
PC55 0.57309 0.47915 0.74673 0.53249 0.77215 0.27463 0.19148
PC56 0.81904 0.63911 0.36667 0.61196 0.58489 0.70308 0.93116
PC57 0.94889 0.98105 0.70725 0.87171 0.92195 0.80936 0.55916
PC58 0.82917 0.63446 0.77617 0.71091 0.49012 0.64279 0.77094
PC59 0.55927 0.66599 0.60591 0.60124 0.46399 0.96639 0.7242
PC60 0.74339 0.72378 0.97299 0.88039 0.29135 0.60024 0.61557
PC61 0.84317 0.91755 0.82697 0.68383 0.90853 0.73903 0.69762
PC62 0.36662 0.55729 0.75834 0.81896 0.81717 0.47171 0.48083
PC63 0.79926 0.70905 0.79603 0.72397 0.75671 0.47232 0.9334
PC64 0.91581 0.68815 0.87222 0.86978 0.35032 0.86409 0.40341
PC65 0.7543 0.92075 0.83302 0.88476 0.88304 0.72693 0.55328
PC66 0.87842 0.62742 0.77365 0.80709 0.8274 0.86862 0.29414
PC67 0.70647 0.8827 0.77365 0.95727 0.51675 0.93943 0.97358
PC68 0.86099 0.8023 0.9425 0.97323 0.93446 0.62125 0.79379
PC69 0.57176 0.66925 0.8915 0.95572 0.41908 0.26801 0.87996
PC70 0.81952 0.60388 0.69321 0.95499 0.49456 0.56539 0.69144
PC71 0.8008 0.73964 0.5328 0.96149 0.97891 0.97713 0.37424
PC72 0.85566 0.88617 0.78418 0.77687 0.93229 0.85493 0.67394
PC73 0.94016 0.94271 0.74253 0.80828 0.74501 0.68567 0.8445
89
Table B.3. Continued.
PLS15 PLS16 PLS17 PLS18 PLS19 PLS20 PLS21
PC74 0.6926 0.67627 0.93548 0.65859 0.94456 0.80441 0.99106
PC75 0.79441 0.77195 0.70627 0.90745 0.87191 0.72291 0.93992
PC76 0.99078 0.81307 0.81406 0.51138 0.50588 0.74513 0.48013
PC77 0.89084 0.45337 0.81113 0.69593 0.75411 0.98583 0.497
PC78 0.86072 0.78253 0.87679 0.80799 0.52818 0.46055 0.99555
PC79 0.66262 0.62321 0.34549 0.78677 0.79408 0.82414 0.43174
PC80 0.99412 0.82325 0.73377 0.85914 0.98157 0.93483 0.88377
PC81 0.86044 0.76334 0.54871 0.84704 0.88435 0.7783 0.77711
PC82 0.87388 0.94083 0.95325 0.7719 0.94486 0.97139 0.49648
PC83 0.86098 0.67069 0.8318 0.76179 0.91934 0.98968 0.97309
PC84 0.79499 0.6728 0.88272 0.60337 0.88019 0.89751 0.99418
PC85 0.96929 0.93831 0.81058 0.49159 0.97264 0.79712 0.9247
PC86 0.54966 0.83858 0.89655 0.86384 0.75436 0.85894 0.58678
PC87 0.89935 0.97909 0.80772 0.81557 0.95905 0.77328 0.75164
PC88 0.68789 0.6083 0.94588 0.62511 0.99598 0.68455 0.79478
PC89 0.76756 0.82091 0.87246 0.77298 0.92957 0.8078 0.85684
PC90 0.6437 0.87178 0.86716 0.95105 0.666 0.65787 0.90596
PC91 0.82021 0.66335 0.83162 0.92755 0.98903 0.85994 0.83007
PC92 0.74673 0.65208 0.70032 0.83202 0.87295 0.50228 0.90313
Table B.4. P-values: PC (all) vs. PLS22-PLS28.
PLS22 PLS23 PLS24 PLS25 PLS26 PLS27 PLS28
PC1 0.95946 0.96903 0.98044 0.96419 0.99237 0.90251 0.90007
PC2 0.89069 0.64479 0.78114 0.90661 0.95547 0.84416 0.88118
PC3 0.89844 0.96879 0.96052 0.70665 0.80602 0.98526 0.97419
PC4 0.94071 0.7315 0.91862 0.9929 0.85101 0.63064 0.82955
PC5 0.58912 0.7586 0.63183 0.7066 0.53089 0.93365 0.83596
PC6 0.74832 0.84054 0.74525 0.8312 0.78874 0.88683 0.98201
PC7 0.91602 0.7203 0.8098 0.69554 0.22748 0.90504 0.69848
PC8 0.59849 0.92751 0.66579 0.63689 0.58884 0.61857 0.96364
PC9 0.58615 0.74351 0.75248 0.99484 0.79099 0.56367 0.48351
90
Table B.4. Continued.
PLS22 PLS23 PLS24 PLS25 PLS26 PLS27 PLS28
PC10 0.16444 0.49797 0.8861 0.59441 0.14982 0.54728 0.47455
PC11 0.64476 0.36256 0.51339 0.71708 0.34766 0.88094 0.59169
PC12 0.51166 0.13152 0.38964 0.44645 0.01923 0.57512 0.48586
PC13 0.60946 0.39496 0.73287 0.9381 0.69665 0.96549 0.73364
PC14 0.20083 0.73182 0.68891 0.72348 0.36161 0.17329 0.42687
PC15 0.5651 0.76893 0.56394 0.76165 0.0163 0.3209 0.55684
PC16 0.67685 0.1851 0.24016 0.3689 0.03028 0.67026 0.96289
PC17 0.80639 0.15387 0.36674 0.68147 0.52891 0.49706 0.41562
PC18 0.80949 0.27674 0.03815 0.87582 0.38608 0.10907 0.9511
PC19 0.3211 0.47256 0.65809 0.66905 0.0056 0.88633 0.23076
PC20 0.74237 0.06518 0.42905 0.59808 0.21055 0.49322 0.38364
PC21 0.35879 0.239 0.01759 0.0088 0.85517 0.03399 0.81873
PC22 0.1081 0.68259 0.60566 0.57727 0.85997 0.11717 0.56292
PC23 0.00012 0.68221 0.35898 0.74739 0.70002 0.70226 0.11838
PC24 <.00001 0.55186 0.01118 0.6674 0.10134 0.11412 0.46902
PC25 0.08005 0.24515 0.37299 0.41548 0.1794 0.35892 0.19987
PC26 0.6619 0.0002 0.44331 0.24492 0.03674 0.33281 0.16562
PC27 0.45716 0.00555 0.35157 0.31543 0.00657 0.37483 0.1105
PC28 0.85066 0.56462 0.6396 0.04117 0.1299 0.00565 0.15267
PC29 0.16794 0.14565 0.01514 0.93965 0.48653 0.66676 0.08371
PC30 0.90042 0.90711 0.00005 0.00058 0.1386 0.11741 0.70305
PC31 0.03372 0.10385 0.24955 0.00471 0.25051 0.82056 0.01293
PC32 0.72125 0.1624 0.04966 <.00001 0.67172 0.05493 0.29302
PC33 0.04549 0.00659 0.05674 0.82502 0.02096 0.22081 0.21688
PC34 0.98136 0.44334 0.39691 0.34327 0.09084 0.07654 0.10201
PC35 0.07051 0.22701 0.07713 0.81066 0.3662 0.0004 0.51356
PC36 0.10652 0.04063 0.95566 0.2578 0.37681 0.07764 0.08485
PC37 0.51471 0.50634 0.20535 0.96075 0.04485 0.03271 0.00132
PC38 0.48776 0.08221 0.56042 0.22847 0.69048 0.23011 0.00707
PC39 0.55835 0.34879 0.47127 0.05932 0.08367 0.50505 0.62219
PC40 0.97916 0.82595 0.68604 0.38954 0.11251 0.14781 0.38035
PC41 0.86518 0.3226 0.07284 0.12705 0.84799 0.93111 0.91191
PC42 0.57736 0.81078 0.55666 0.90607 0.29381 0.22341 0.18789
PC43 0.36178 0.03503 0.62948 0.30542 0.70855 0.32239 0.90574
91
Table B.4. Continued.
PLS22 PLS23 PLS24 PLS25 PLS26 PLS27 PLS28
PC44 0.57303 0.7937 0.17513 0.12002 0.80694 0.65742 0.52664
PC45 0.97906 0.38117 0.9347 0.50754 0.51403 0.52347 0.05824
PC46 0.64009 0.74489 0.05897 0.74648 0.96447 0.16996 0.0995
PC47 0.0719 0.89315 0.6246 0.93658 0.36925 0.27479 0.05631
PC48 0.93411 0.67893 0.09788 0.24786 0.48681 0.93061 0.96475
PC49 0.18904 0.47937 0.94048 0.6901 0.30336 0.18587 0.35306
PC50 0.82664 0.62419 0.09426 0.13183 0.65537 0.94764 0.34217
PC51 0.73615 0.80592 0.65623 0.02845 0.73612 0.96852 0.71939
PC52 0.94231 0.11859 0.82503 0.87574 0.674 0.24743 0.70066
PC53 0.21042 0.56966 0.22959 0.81777 0.51795 0.37564 0.19672
PC54 0.95515 0.15882 0.61486 0.6809 0.22658 0.76662 0.62445
PC55 0.11824 0.78331 0.50255 0.61544 0.8717 0.86829 0.84039
PC56 0.68978 0.22964 0.42215 0.23648 0.8731 0.39642 0.82035
PC57 0.43432 0.821 0.57372 0.73536 0.24396 0.62937 0.63303
PC58 0.68891 0.7649 0.63401 0.47677 0.92889 0.23354 0.66239
PC59 0.82863 0.2596 0.71888 0.62134 0.80669 0.70094 0.34106
PC60 0.44707 0.65688 0.57787 0.52718 0.83799 0.14178 0.86993
PC61 0.49632 0.64529 0.80034 0.60115 0.82805 0.88685 0.36478
PC62 0.90548 0.62194 0.54033 0.80723 0.31511 0.81767 0.64542
PC63 0.52576 0.62308 0.97752 0.81528 0.46252 0.2597 0.83751
PC64 0.74889 0.94403 0.30079 0.79066 0.95544 0.31239 0.92266
PC65 0.90835 0.94856 0.71099 0.42444 0.86476 0.75572 0.48517
PC66 0.98308 0.1773 0.73082 0.61128 0.89489 0.28999 0.99217
PC67 0.60977 0.93559 0.98029 0.96973 0.59435 0.54654 0.43255
PC68 0.54367 0.12896 0.48866 0.61804 0.77192 0.41774 0.39652
PC69 0.74229 0.96829 0.61607 0.73128 0.14831 0.78156 0.64336
PC70 0.58639 0.65958 0.73392 0.96657 0.80124 0.97414 0.86601
PC71 0.62421 0.96246 0.3301 0.9879 0.81372 0.71229 0.66277
PC72 0.91178 0.57824 0.93397 0.86099 0.80827 0.21823 0.86012
PC73 0.89008 0.46601 0.7096 0.25851 0.85402 0.89008 0.99727
PC74 0.56947 0.85109 0.72393 0.73434 0.84316 0.4013 0.37937
PC75 0.51218 0.68984 0.50916 0.49079 0.41105 0.51281 0.32342
PC76 0.73792 0.80931 0.91922 0.6362 0.48911 0.23374 0.68489
PC77 0.58417 0.62253 0.89569 0.69355 0.6998 0.60297 0.40757
92
Table B.4. Continued.
PLS22 PLS23 PLS24 PLS25 PLS26 PLS27 PLS28
PC78 0.56991 0.50683 0.77087 0.57305 0.51948 0.81233 0.60021
PC79 0.42535 0.91137 0.98636 0.82429 0.72662 0.65487 0.55491
PC80 0.98296 0.92979 0.8649 0.99462 0.79415 0.99755 0.87105
PC81 0.91627 0.83105 0.78468 0.8153 0.84244 0.8445 0.94414
PC82 0.66503 0.87923 0.88759 0.50195 0.90813 0.67319 0.73442
PC83 0.7183 0.9821 0.98444 0.56645 0.98275 0.63598 0.68561
PC84 0.8357 0.93322 0.51463 0.91252 0.66262 0.58824 0.31205
PC85 0.37572 0.7839 0.94587 0.63982 0.63651 0.75558 0.99742
PC86 0.88679 0.61009 0.82171 0.63925 0.97034 0.9123 0.9033
PC87 0.24197 0.90119 0.87818 0.69606 0.6563 0.8624 0.37952
PC88 0.90265 0.88197 0.41896 0.87332 0.54219 0.7449 0.75272
PC89 0.97621 0.70988 0.62185 0.79352 0.71778 0.31149 0.86751
PC90 0.80633 0.96726 0.38282 0.31456 0.8461 0.54734 0.94252
PC91 0.85023 0.72847 0.87091 0.75592 0.94238 0.91743 0.79662
PC92 0.88948 0.66468 0.63271 0.74798 0.93964 0.67864 0.79906
Table B.5. P-values: PC (all) vs. PLS29-PLS35.
PLS29 PLS30 PLS31 PLS32 PLS33 PLS34 PLS35
PC1 0.95596 0.93741 0.99342 0.93449 0.949 0.99719 0.99679
PC2 0.95973 0.70918 0.89827 0.83916 0.99491 0.87067 0.92312
PC3 0.97356 0.78969 0.85263 0.96734 0.7611 0.85829 0.98853
PC4 0.99707 0.87469 0.84643 0.66918 0.82322 0.88022 0.83536
PC5 0.78556 0.88652 0.98122 0.90173 0.99667 0.51095 0.87718
PC6 0.98053 0.92885 0.93287 0.85137 0.90654 0.91264 0.99312
PC7 0.88101 0.93201 0.65477 0.74915 0.59192 0.81381 0.82471
PC8 0.85863 0.8279 0.73076 0.97129 0.99496 0.93475 0.80701
PC9 0.88851 0.93339 0.94074 0.86724 0.83685 0.99791 0.95985
PC10 0.85121 0.63103 0.64736 0.6969 0.49529 0.78617 0.66919
PC11 0.87381 0.72044 0.74562 0.88029 0.90622 0.90337 0.9399
PC12 0.98158 0.65246 0.59677 0.535 0.61515 0.85976 0.72671
PC13 0.5247 0.73546 0.81107 0.7543 0.61874 0.85296 0.94595
PC14 0.76664 0.38012 0.57778 0.49942 0.93206 0.37867 0.97675
PC15 0.97089 0.79915 0.42137 0.23362 0.10416 0.8926 0.68907
PC16 0.92201 0.37593 0.37913 0.79126 0.24212 0.69251 0.70224
93
Table B.5. Continued.
PLS29 PLS30 PLS31 PLS32 PLS33 PLS34 PLS35
PC17 0.79179 0.55479 0.98293 0.99638 0.96253 0.86607 0.93544
PC18 0.62884 0.62622 0.39476 0.42592 0.47295 0.48546 0.74966
PC19 0.96506 0.21945 0.67122 0.44081 0.53655 0.21044 0.87959
PC20 0.79528 0.73973 0.83543 0.09805 0.77205 0.51252 0.80053
PC21 0.23022 0.58233 0.6482 0.80252 0.73082 0.99737 0.37254
PC22 0.0993 0.30849 0.82581 0.71834 0.86468 0.52088 0.63079
PC23 0.83763 0.65311 0.96334 0.67764 0.69318 0.94524 0.69383
PC24 0.18222 0.00673 0.84871 0.28728 0.28327 0.8841 0.12138
PC25 0.2495 0.26705 0.55155 0.62631 0.45557 0.12691 0.83976
PC26 0.67323 0.21128 0.75817 0.00271 0.00729 0.54629 0.59533
PC27 0.03533 0.07647 0.32323 0.94668 0.06829 0.42377 0.37374
PC28 0.39025 0.32547 0.15912 0.06019 0.61429 0.75282 0.44205
PC29 0.08868 0.24893 0.9096 0.08777 0.99675 0.84985 0.75046
PC30 0.47561 0.47382 0.13912 0.04922 0.50008 0.75464 0.99143
PC31 0.95352 0.00569 0.83739 0.87843 0.92069 0.72057 0.00217
PC32 0.61422 0.5906 0.00137 0.74233 0.35643 0.50656 0.00857
PC33 0.01532 0.13508 0.97954 0.0497 0.15324 0.73183 0.17961
PC34 0.24857 0.00433 0.58239 0.28077 0.00661 0.29767 0.00078
PC35 0.01927 0.22944 0.54908 0.11855 <.00001 0.11606 0.21038
PC36 0.55111 0.29657 0.07427 0.6033 0.23735 0.07951 0.77173
PC37 0.49613 0.02295 0.79927 0.06348 0.57893 0.79234 0.99222
PC38 0.00254 0.05149 0.16896 0.04182 0.83674 0.92306 0.56924
PC39 0.19346 0.78732 0.06445 0.87051 0.00548 0.0057 0.02228
PC40 0.94287 0.19301 0.82512 0.33065 0.7624 0.8735 0.05558
PC41 0.03641 0.71566 0.00002 0.56402 0.22653 0.53353 0.21281
PC42 0.03844 0.13313 0.1964 0.00221 0.72463 0.5213 0.10896
PC43 0.00004 0.17833 0.26405 0.45414 0.04725 0.07077 0.67483
PC44 0.92428 0.18931 0.36613 0.20351 0.48214 0.04402 0.1946
PC45 0.46064 0.0643 0.05592 0.82532 0.46374 0.13055 0.14264
PC46 0.71792 0.47083 0.64576 0.19079 0.41838 0.01068 0.91764
PC47 0.28159 0.54622 0.51295 0.3749 0.40798 0.13153 0.75542
PC48 0.57379 0.32625 0.00315 0.9393 0.08179 0.33272 0.64215
PC49 0.1105 0.3889 0.60767 0.57659 0.80967 0.07189 0.03322
PC50 0.08591 0.82836 0.21675 0.25057 0.18762 0.29312 0.33837
94
Table B.5. Continued.
PLS29 PLS30 PLS31 PLS32 PLS33 PLS34 PLS35
PC51 0.28534 0.67702 0.25263 0.41609 0.53632 0.62189 0.25261
PC52 0.79325 0.56848 0.88261 0.61447 0.55183 0.68888 0.01386
PC53 0.45499 0.6444 0.21767 0.19641 0.24185 0.04474 0.20922
PC54 0.44399 0.9806 0.19402 0.16866 0.76391 0.32233 0.37771
PC55 0.7942 0.84643 0.70261 0.49681 0.50965 0.24492 0.67826
PC56 0.5595 0.11889 0.28054 0.13812 0.08168 0.30889 0.91318
PC57 0.93345 0.45022 0.4567 0.04503 0.87029 0.51943 0.25161
PC58 0.71097 0.27953 0.78606 0.88297 0.18663 0.00714 0.70589
PC59 0.26367 0.94544 0.37326 0.46568 0.85987 0.56953 0.6871
PC60 0.95131 0.47171 0.82616 0.35756 0.79275 0.53297 0.62578
PC61 0.66894 0.39067 0.36068 0.29659 0.76904 0.87519 0.72326
PC62 0.89917 0.104 0.39592 0.007 0.62317 0.00696 0.85202
PC63 0.1829 0.9429 0.58375 0.57135 0.54628 0.58402 0.93539
PC64 0.8386 0.64018 0.73702 0.50492 0.7872 0.9248 0.80356
PC65 0.0516 0.35579 0.68577 0.29262 0.10297 0.22497 0.98401
PC66 0.70863 0.16021 0.91777 0.99588 0.78092 0.8833 0.53995
PC67 0.63801 0.49987 0.18122 0.58627 0.68019 0.83863 0.38664
PC68 0.75276 0.21142 0.61473 0.7323 0.8266 0.75585 0.5728
PC69 0.63866 0.30983 0.86884 0.33484 0.19757 0.72332 0.3098
PC70 0.98964 0.99522 0.4841 0.46826 0.9827 0.38246 0.40204
PC71 0.93539 0.40003 0.77857 0.8588 0.40094 0.19977 0.94395
PC72 0.771 0.06267 0.67012 0.1772 0.22131 0.3622 0.07675
PC73 0.98349 0.66835 0.56295 0.72632 0.60111 0.85615 0.10203
PC74 0.58581 0.99445 0.91174 0.90167 0.78389 0.86982 0.60848
PC75 0.35975 0.64164 0.15097 0.6784 0.78519 0.42312 0.08323
PC76 0.95974 0.33864 0.09714 0.98157 0.85406 0.74949 0.13764
PC77 0.18861 0.98532 0.95944 0.88765 0.56518 0.50755 0.60282
PC78 0.76474 0.7814 0.2361 0.66625 0.64674 0.19798 0.42447
PC79 0.65081 0.46886 0.65682 0.76411 0.63979 0.05425 0.97128
PC80 0.77138 0.94722 0.25643 0.83692 0.72725 0.8318 0.95058
PC81 0.92958 0.59531 0.23648 0.9713 0.90098 0.69513 0.90302
PC82 0.34205 0.32902 0.53913 0.51799 0.60402 0.86996 0.91721
PC83 0.82952 0.59191 0.5359 0.44022 0.4087 0.59125 0.92507
PC84 0.50642 0.34568 0.68171 0.84792 0.56253 0.27194 0.97239
PC85 0.53866 0.68013 0.34343 0.95238 0.69597 0.84689 0.9854
95
Table B.5. Continued.
PLS29 PLS30 PLS31 PLS32 PLS33 PLS34 PLS35
PC86 0.57604 0.51839 0.70422 0.93464 0.95455 0.76128 0.99682
PC87 0.91535 0.4902 0.50734 0.96572 0.78464 0.59385 0.53447
PC88 0.68108 0.98713 0.65973 0.24664 0.11761 0.58565 0.92005
PC89 0.4774 0.90864 0.67173 0.66575 0.54978 0.58748 0.78422
PC90 0.85164 0.95072 0.98984 0.8925 0.75737 0.60984 0.47188
PC91 0.95764 0.91537 0.79859 0.76405 0.70201 0.34946 0.85545
PC92 0.82337 0.70694 0.88491 0.95775 0.79871 0.50114 0.49063
Table B.6. P-values: PC (all) vs. PLS36-PLS42.
PLS36 PLS37 PLS38 PLS39 PLS40 PLS41 PLS42
PC1 0.89498 0.99572 0.98953 0.95684 0.97294 0.98998 0.9387
PC2 0.99333 0.94945 0.9714 0.99133 0.96728 0.90641 0.80642
PC3 0.96902 0.94276 0.99784 0.99931 0.9087 0.94177 0.95515
PC4 0.73018 0.95064 0.96721 0.88034 0.92462 0.8498 0.66531
PC5 0.77639 0.99934 0.90948 0.58324 0.9194 0.86947 0.82448
PC6 0.85845 0.92498 0.95325 0.84248 0.93496 0.90825 0.92515
PC7 0.94669 0.77275 0.94263 0.90063 0.94709 0.8464 0.96439
PC8 0.91268 0.76412 0.775 0.93544 0.87789 0.8653 0.97158
PC9 0.97287 0.83317 0.86522 0.97082 0.59797 0.97682 0.90952
PC10 0.79068 0.9184 0.92881 0.88946 0.96444 0.95586 0.8123
PC11 0.4676 0.60182 0.92095 0.73746 0.83048 0.97072 0.88652
PC12 0.54243 0.68314 0.92028 0.70966 0.86321 0.90882 0.83644
PC13 0.79724 0.94911 0.75651 0.87637 0.72906 0.90956 0.76306
PC14 0.84504 0.91415 0.87704 0.43341 0.95092 0.94991 0.88565
PC15 0.64468 0.75809 0.81252 0.89078 0.93905 0.96445 0.68498
PC16 0.78531 0.96826 0.89795 0.56074 0.40662 0.8203 0.55217
PC17 0.74782 0.77638 0.78917 0.82004 0.81356 0.86336 0.48155
PC18 0.57612 0.57434 0.48387 0.35204 0.68294 0.89454 0.19683
PC19 0.58559 0.60497 0.59673 0.33174 0.58716 0.64169 0.42803
PC20 0.73116 0.56147 0.60197 0.29814 0.65953 0.85136 0.12667
PC21 0.64538 0.96575 0.57368 0.28609 0.52947 0.99482 0.68954
PC22 0.86351 0.46058 0.75595 0.53841 0.90772 0.83755 0.81781
96
Table B.6. Continued.
PLS36 PLS37 PLS38 PLS39 PLS40 PLS41 PLS42
PC23 0.48521 0.69396 0.8239 0.58667 0.73071 0.6555 0.53812
PC24 0.32302 0.55523 0.74971 0.94435 0.71965 0.42958 0.68089
PC25 0.58775 0.71484 0.96657 0.86714 0.68379 0.69808 0.30806
PC26 0.52342 0.67905 0.13207 0.65318 0.78595 0.96072 0.78006
PC27 0.68271 0.92188 0.26098 0.16593 0.41317 0.95907 0.61258
PC28 0.32383 0.85489 0.92909 0.12155 0.44764 0.56628 0.54922
PC29 0.61339 0.48324 0.78035 0.51218 0.71936 0.56316 0.47283
PC30 0.14276 0.02251 0.72907 0.96558 0.54791 0.95307 0.96299
PC31 0.60354 0.28235 0.33932 0.20117 0.47139 0.30946 0.13677
PC32 0.81686 0.01155 0.96371 0.98177 0.3888 0.59434 0.54587
PC33 0.18038 0.01228 0.10433 0.33335 0.19799 0.54521 0.2322
PC34 0.17811 0.77684 0.59378 0.45921 0.62204 0.62561 0.92641
PC35 0.51013 0.30832 0.45295 0.61143 0.75613 0.52676 0.44002
PC36 0.27973 0.64594 0.06605 0.16136 0.37721 0.68314 0.61782
PC37 0.77987 0.01204 0.5273 0.82712 0.17556 0.70234 0.01052
PC38 0.25882 0.00242 0.26949 0.88962 0.0321 0.33536 0.03996
PC39 0.39768 0.86409 0.19424 0.54057 0.24553 0.13811 0.97374
PC40 0.02326 0.38603 0.02022 0.94339 0.86383 0.27504 0.76132
PC41 0.00401 0.42819 0.3168 0.29814 0.20799 0.49148 0.06248
PC42 0.79702 0.13814 0.24113 0.72642 0.57962 0.08288 0.51001
PC43 0.59283 0.03389 0.00495 0.91287 0.49135 0.57886 0.60329
PC44 0.76428 0.95376 0.44567 0.22781 0.76667 0.83274 0.05575
PC45 0.0039 0.15298 0.86675 0.16765 0.0714 0.07084 0.3735
PC46 0.54224 0.15474 0.03674 0.24047 0.00018 0.18221 0.542
PC47 0.87409 0.36238 0.64032 0.57646 0.82814 0.09917 0.30095
PC48 0.52818 0.21737 0.17065 0.29898 0.83966 0.63079 0.08713
PC49 0.03273 0.48767 0.02605 0.028 0.43257 0.28525 0.08507
PC50 0.73669 0.80009 0.82551 0.4993 0.03238 0.35904 0.30862
PC51 0.37294 0.49224 0.10087 0.34963 0.18701 0.04105 0.51779
PC52 0.00076 0.35743 0.1223 0.90253 0.54799 0.09004 0.11105
PC53 0.09866 0.56375 0.3445 0.45106 0.99051 0.85466 0.94236
PC54 0.04831 0.53028 0.37527 0.34159 0.82554 0.03436 0.64124
PC55 0.62879 0.09892 0.65104 0.03137 0.00706 0.19472 0.3459
97
Table B.6. Continued.
PLS36 PLS37 PLS38 PLS39 PLS40 PLS41 PLS42
PC56 0.23644 0.72134 0.04914 0.30643 0.99313 0.15856 0.59697
PC57 0.64559 0.9015 0.14974 0.98925 0.51423 0.56535 0.44663
PC58 0.58149 0.85151 0.14157 0.924 0.30455 0.002 0.85191
PC59 0.98418 0.69574 0.88937 0.72254 0.44536 0.84227 0.28356
PC60 0.88079 0.4882 0.76938 0.21148 0.06349 0.05516 0.03147
PC61 0.42573 0.47251 0.95251 0.00426 0.64982 0.02469 0.0977
PC62 0.79829 0.99667 0.38007 0.09839 0.06321 0.02639 0.37208
PC63 0.69293 0.45843 0.13459 0.06858 0.74496 0.91479 0.09433
PC64 0.54269 0.03668 0.66984 0.95523 0.55784 0.80513 0.13935
PC65 0.6039 0.84649 0.40252 0.8355 0.59969 0.90438 0.16979
PC66 0.56558 0.16866 0.85485 0.66581 0.25035 0.02299 0.00405
PC67 0.02183 0.14737 0.41636 0.60844 0.6679 0.0834 0.74365
PC68 0.80846 0.196 0.90284 0.03489 0.39514 0.8555 0.5361
PC69 0.71209 0.92742 0.28819 0.91437 0.43731 0.04518 0.86643
PC70 0.22479 0.42529 0.53406 0.08159 0.97991 0.52142 0.62311
PC71 0.5295 0.88583 0.3272 0.06755 0.06542 0.63077 0.59862
PC72 0.45869 0.84256 0.10665 0.54952 0.51824 0.83758 0.59531
PC73 0.19888 0.75045 0.33194 0.89268 0.81733 0.06756 0.93018
PC74 0.78055 0.13322 0.51757 0.06598 0.72404 0.83845 0.96964
PC75 0.6224 0.58262 0.81573 0.97288 0.95289 0.61923 0.14304
PC76 0.80663 0.4042 0.90628 0.95149 0.27858 0.61675 0.61665
PC77 0.23478 0.33089 0.60141 0.50277 0.79575 0.78356 0.86884
PC78 0.65701 0.13592 0.5099 0.02314 0.07526 0.66794 0.89864
PC79 0.13624 0.35051 0.42753 0.9531 0.41517 0.45505 0.99069
PC80 0.65723 0.588 0.61549 0.66475 0.56945 0.92583 0.68294
PC81 0.68681 0.90611 0.34216 0.7294 0.68709 0.80623 0.29241
PC82 0.76878 0.81808 0.95142 0.66493 0.53197 0.54678 0.84434
PC83 0.30908 0.40101 0.30597 0.06442 0.12758 0.20599 0.87855
PC84 0.22578 0.63958 0.01608 0.15299 0.67245 0.78245 0.7347
PC85 0.42526 0.24789 0.61705 0.65989 0.2698 0.94167 0.98078
PC86 0.50473 0.48389 0.86041 0.04969 0.32961 0.46284 0.83287
PC87 0.79133 0.75605 0.37503 0.86168 0.66149 0.7854 0.70087
PC88 0.58224 0.48062 0.57966 0.54628 0.09101 0.38165 0.27467
PC89 0.52343 0.29239 0.41498 0.69923 0.04254 0.85898 0.63646
PC90 0.09112 0.68547 0.18247 0.02603 0.32142 0.91523 0.85554
98
Table B.6. Continued.
PLS36 PLS37 PLS38 PLS39 PLS40 PLS41 PLS42
PC91 0.40226 0.95279 0.63796 0.34448 0.31973 0.04678 0.92862
PC92 0.29498 0.71272 0.10969 0.91371 0.10268 0.26506 0.54589
Table B.7. P-values: PC (all) vs. PLS43-PLS48.
PLS43 PLS44 PLS45 PLS46 PLS47 PLS48
PC1 0.96926 0.93271 0.99325 0.99199 0.95816 0.9176
PC2 0.95959 0.99762 0.93565 0.96342 0.91612 0.79924
PC3 0.92519 0.90101 0.93397 0.92004 0.92683 0.98892
PC4 0.9888 0.80065 0.8967 0.96982 0.77011 0.59968
PC5 0.74592 0.86787 0.86444 0.97024 0.95699 0.95727
PC6 0.98643 0.95907 0.94654 0.96483 0.98147 0.82225
PC7 0.94825 0.99996 0.98843 0.95417 0.94654 0.99225
PC8 0.91628 0.96312 0.91591 0.88908 0.92229 0.87127
PC9 0.94228 0.96982 0.98786 0.99549 0.94788 0.92103
PC10 0.89243 0.77748 0.90101 0.94299 0.89436 0.96952
PC11 0.93374 0.85769 0.9117 0.97971 0.74627 0.74493
PC12 0.97029 0.79005 0.78056 0.9997 0.93416 0.95957
PC13 0.94149 0.97246 0.90568 0.95842 0.94897 0.9814
PC14 0.75314 0.8769 0.97636 0.98249 0.9082 0.89975
PC15 0.94204 0.96499 0.89685 0.8548 0.83163 0.78503
PC16 0.89052 0.69566 0.99708 0.70462 0.79992 0.43594
PC17 0.74615 0.67524 0.76618 0.81998 0.67946 0.61835
PC18 0.45389 0.3407 0.65704 0.86417 0.65995 0.7749
PC19 0.88842 0.43365 0.60256 0.69747 0.81099 0.49245
PC20 0.90713 0.36143 0.73559 0.86812 0.42558 0.71548
PC21 0.73347 0.34948 0.57019 0.99205 0.49882 0.94577
PC22 0.74602 0.89593 0.88814 0.75408 0.9304 0.86557
PC23 0.64575 0.68129 0.99561 0.99991 0.74955 0.85379
PC24 0.73416 0.81973 0.58885 0.91222 0.68708 0.5374
PC25 0.74844 0.88874 0.78135 0.59729 0.97212 0.49711
PC26 0.81262 0.47235 0.48647 0.89548 0.99554 0.86196
PC27 0.54881 0.17626 0.91626 0.76202 0.88155 0.54934
PC28 0.37147 0.54792 0.87458 0.78941 0.81433 0.82855
99
Table B.7. Continued.
PLS43 PLS44 PLS45 PLS46 PLS47 PLS48
PC29 0.5167 0.65193 0.89851 0.71188 0.70265 0.59664
PC30 0.9527 0.62762 0.37868 0.22359 0.99908 0.47149
PC31 0.79637 0.39019 0.97074 0.30119 0.54135 0.60386
PC32 0.99275 0.42305 0.62178 0.53496 0.16799 0.6681
PC33 0.65573 0.90595 0.71061 0.91551 0.60611 0.31978
PC34 0.84163 0.60417 0.51821 0.24398 0.53251 0.24313
PC35 0.77115 0.185 0.72041 0.84814 0.96699 0.82955
PC36 0.93964 0.94617 0.08651 0.83792 0.49275 0.8804
PC37 0.46593 0.12046 0.21958 0.68716 0.47358 0.17091
PC38 0.40308 0.57625 0.98033 0.82419 0.64599 0.90653
PC39 0.87295 0.22128 0.09488 0.79976 0.71739 0.87737
PC40 0.38905 0.51597 0.51605 0.6243 0.09736 0.55459
PC41 0.91652 0.63799 0.41314 0.76611 0.57132 0.33258
PC42 0.97499 0.76106 0.33388 0.70094 0.9349 0.9895
PC43 0.06647 0.84828 0.63258 0.64852 0.439 0.19248
PC44 0.12985 0.39102 0.50973 0.14467 0.65635 0.49933
PC45 0.23321 0.8203 0.24672 0.21598 0.25602 0.10583
PC46 0.17581 0.90832 0.02839 0.82154 0.31037 0.35603
PC47 0.24208 0.12831 0.48185 0.59838 0.0362 0.02766
PC48 0.33587 0.934 0.13711 0.66775 0.38647 0.55721
PC49 0.25331 0.00011 0.60392 0.43797 0.03551 0.61355
PC50 0.3866 0.07159 0.13475 0.65131 0.04934 0.36586
PC51 0.0093 0.4198 0.19903 0.02046 0.82602 0.36718
PC52 0.21775 0.36736 0.1135 0.8204 0.0248 0.17183
PC53 0.83271 0.86162 0.28928 0.01029 0.80363 0.34811
PC54 0.19421 0.40885 0.14289 0.06303 0.5532 0.69428
PC55 0.2127 0.20786 0.4686 0.0164 0.0715 0.21636
PC56 0.52895 0.06202 0.91926 0.07302 0.57868 0.06763
PC57 0.01585 0.90067 0.26463 0.63516 0.04311 0.09922
PC58 0.42173 0.93484 0.04877 0.11457 0.08746 0.83694
PC59 0.05427 0.91007 0.85478 0.04669 0.31489 0.88761
PC60 0.00696 0.00465 0.73036 0.80149 0.82136 0.02116
PC61 0.51101 0.47154 0.92177 0.04052 0.12042 0.47769
PC62 0.58158 0.51663 0.00852 0.0922 0.39958 0.1041
100
Table B.7. Continued.
PLS43 PLS44 PLS45 PLS46 PLS47 PLS48
PC63 0.00596 0.73364 0.49554 0.15513 0.74999 0.11587
PC64 0.30721 0.64956 0.0003 0.164 0.37588 0.11546
PC65 0.36213 0.00686 0.17034 0.12859 0.58588 0.73083
PC66 0.57271 0.1615 0.23787 0.03077 0.0388 0.46266
PC67 0.49527 0.22033 0.24935 0.66578 0.31115 0.36831
PC68 0.55478 0.11755 0.5123 0.67117 0.61016 0.35618
PC69 0.05763 0.95203 0.94253 0.68891 0.42872 0.68859
PC70 0.91373 0.73834 0.19272 0.44239 0.97049 0.79611
PC71 0.55956 0.99606 0.62288 0.43995 0.02491 0.68591
PC72 0.15698 0.84871 0.54645 0.51255 0.23655 0.54319
PC73 0.41642 0.71214 0.7181 0.24018 0.92293 0.86119
PC74 0.32287 0.06055 0.28875 0.33963 0.38777 0.13535
PC75 0.83892 0.00682 0.33709 0.17591 0.08817 0.49852
PC76 0.37531 0.4288 0.85617 0.01102 0.10276 0.87073
PC77 0.7171 0.2391 0.40182 0.7375 0.60733 0.29416
PC78 0.84502 0.00661 0.255 0.49556 0.39022 0.42139
PC79 0.75739 0.53107 0.28664 0.17032 0.15454 0.76421
PC80 0.91993 0.36755 0.63868 0.49517 0.46922 0.89826
PC81 0.96579 0.26442 0.76622 0.48659 0.89717 0.86502
PC82 0.27122 0.99633 0.79536 0.27483 0.86292 0.1718
PC83 0.92334 0.70729 0.92312 0.70365 0.94376 0.35801
PC84 0.3416 0.50637 0.58229 0.88966 0.54057 0.13952
PC85 0.37955 0.6005 0.748 0.56421 0.26493 0.78494
PC86 0.77418 0.8553 0.68554 0.32714 0.56999 0.12469
PC87 0.1246 0.49987 0.62072 0.21232 0.28375 0.10585
PC88 0.56382 0.80193 0.32124 0.75658 0.36619 0.08194
PC89 0.6065 0.84463 0.71992 0.30087 0.40522 0.99176
PC90 0.78569 0.61063 0.97797 0.11454 0.18097 0.1057
PC91 0.56418 0.64101 0.62879 0.99325 0.80236 0.46765
PC92 0.27382 0.40035 0.91522 0.0137 0.00201 0.00557
101
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108
CURRICULUM VITAE
Brianne E. Charles
1987
3251 Normandy Lane
Green Bay, WI 54301
Education Masters of Science Degree in Forensic Anthropology
(In progress)
Boston University School of Medicine, Boston, MA.
(GPA 3.9)
Graduate Coursework
Osteology and Anatomy
Outdoor Crime Scene Investigation
Forensic Taphonomy
Forensic Anthropology Techniques
Pathology
Experimental Design
Biostatistics
Advanced Human Osteology
Mortuary Archaeology
History, Method, and Theory in Biological
Anthropology
Forensic Anthropology Field Methods
Bioarchaeology
Applied Forensic Anthropology
Expert Witness Testimony
Sept
2013
Bachelors of Arts Degree in Anthropology
University of WI-Milwaukee, Milwaukee, WI.
Dean’s List 3 semesters (GPA 3.495)
May
2010
Research
Experience
Boston University School of Medicine Department of
Anatomy and Neurobiology, Forensic Anthropology Program Boston, MA.
Advisor: Mr. Jonathon Bethard, MA
Thesis Title: “A Geometric Morphometric Analysis
of the Human Ossa Coxae for Sex Estimation”
2011-
2013
109
Related
Training
and
Experience
Analysis of Organismal Form, University of
Manchester, Manchester, UK
Online course taught by Christian Klingenberg
with focus on geometric morphometric analysis
and the use of MorphoJ software in various
biological fields
Fall 2012
Knoxville Regional Forensic Center, Knoxville, TN
Worked under the supervision of Dr. Murray K.
Marks
Processed bodies for the collection of skeletal
remains
July 2012
Ecomuseu de Cap de Cavalleria Field School,
Menorca, Spain
Participated in the excavation of a tomb at a
Roman necropolis
Analyzed and documented skeletal remains in
laboratory
Prepared a final presentation on taphonomic factors
affecting the condition of skeletal remains
May-
June
2012
Forensic Entomology Seminar, Boston University
School of Medicine, Boston, MA
Attended lecture by Dr. Ian Dadour from the
University of Western Australia on the applications
of entomology within a forensic setting and current
research in the field
March
2012
Archival Project for the Milwaukee County
Institutional Grounds Cemetery, University of WI- Milwaukee, Milwaukee, WI
Documented and packaged skeletal remains from
an historical cemetery
Applied methods of archival consistent with
project protocol
February
2009- May
2010
110
Zooarchaeology Study Abroad Course, University
of WI-Milwaukee, Huanchaco, Peru
Emphasis on Moche culture and zooarchaeology in
the North Coast region of Peru
Sorted, identified, catalogued, and bagged faunal
June
2009
remains
Relevant
Training
Microscribe® Digitizer
Leica Total Station
TDS Recon Data Logger and Survey Pro
FEMA NIMS Incident Command System: ICS-
100 Level
Maceration of Human remains
Computer programs: FORDISC 3.0, MorphoJ,
Microsoft Excel