Interaction of Na(I), Ni(II) and Cu(II) with 2-cyano-2-(hydroxyimino)acetic acid: Spectroscopic and...
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Transcript of Interaction of Na(I), Ni(II) and Cu(II) with 2-cyano-2-(hydroxyimino)acetic acid: Spectroscopic and...
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Polyhedron 24 (2005) 1175–1184
Interaction of Na(I), Ni(II) and Cu(II) with 2-cyano-2-(hydroxyimino)acetic acid: Spectroscopic and theoretical studies
Kamilla Malek a, Henryk Kozłowski b, Leonard M. Proniewicz a,c,*
a Faculty of Chemistry, Jagiellonian University, R. Ingardena 3, 30-060 Krakow, Polandb Faculty of Chemistry, University of Wroclaw, F. Joliot-Curie 14, 50-383 Wroclaw, Poland
c Regional Laboratory of Physicochemical Analysis and Structural Research, Jagiellonian University, R. Ingardena 3, 30-060 Krakow, Poland
Received 15 December 2004; accepted 4 April 2005
Available online 23 May 2005
Abstract
Sodium(I) salt as well as nickel(II) and copper(II) complexes of 2-cyano-2-(hydroxyimino)acetic acid (1a) have been prepared and
characterized by infrared, Raman and EPR spectra. Molecular structures of the compounds in the solid state are proposed. The
bidentate 1a ligand chelates the copper and nickel ions through the oxime nitrogen and the carboxyl oxygen atoms to form a trans
bis-complexes. However, two sodium ions are bonded to the deprotonated oximic as well as carboxylic groups. Equilibrium geo-
metries, atomic charges, harmonic vibrational frequencies with potential energy distribution (PED), infrared and Raman intensities
are calculated for all compounds studied here by using the hybrid functional of DFT (B3LYP) with 6-311++G(d,p) and LanL2DZ
basis sets, for sodium and transition metal ions complexes, respectively. The computed properties are compared to the experimental
values.
� 2005 Elsevier Ltd. All rights reserved.
Keywords: Cyanoxime complexes; IR; Raman; DFT; PED; Atomic charges
1. Introduction
The coordination properties of cyanoximes have sig-
nificant impact on their biological activity such as
growth regulatory, antimicrobial or fungicidal proper-ties. For instance, this class of oximes belongs to the
family of Althiomycin antibiotics [1–3]. Also organoanti-
mony(V) cyanoximes have been intensively studied as
potential use in chemotherapy agents with lower toxicity
than Pt(II) and Pd(II) anticancer drugs [4–6].
This group of ligands, with the general formula
HOAN@C(C„N)AR, is characterized by the high acid-
ity that is due to the presence of the cyano group located
0277-5387/$ - see front matter � 2005 Elsevier Ltd. All rights reserved.
doi:10.1016/j.poly.2005.04.007
* Corresponding author. Tel.: +48 12 663 2253/2064; fax: +48 12 634
0515.
E-mail address: [email protected] (L.M. Proniewicz).
close to the oximic moiety. Deprotonation of the oximic
proton in solution causes formation of stable anions.
This acidity is almost 103–105 greater than the acidity
of oximes with aliphatic or ring substituents at the a-car-bon. Thus, the deprotonated cyanoximes form variouscoordination compounds with different metal ions. The
type of metal ion (s-, p- d-metals) bonded by a
cyanoxime forces firstly a particular complexation struc-
ture. Additionally, H-bonding, conjugation, stabiliza-
tions of certain ligand molecule conformation are
responsible for structures of cyanoximes and their metal
complexes in solution as well as solid state [4–8].
As the extension of our previous studies, we nowpresent a systematic investigation of molecular struc-
tures of sodium(I) salt as well as nickel(II) and
copper(II) complexes of 2-cyano-2-(hydroxyimino)ace-
tic acid (1a, [H2L]). In this ligand, the carboxylic group
1176 K. Malek et al. / Polyhedron 24 (2005) 1175–1184
is adjacent to the oximic a-carbon. Far now, this partic-ular oxime and their complexes with copper(II) and
nickel(II) ions have been studied in solution (potentio-
metric, UV–Vis, EPR studies) only [8]. It is known that
this class of oximes predominantly coordinates to metals
via the nitrogen atom (mainly transition metal ions) orvia the oxygen atom (s-, p-metal ions). Additionally,
deprotonation of the 1a oximic group allows formation
of dimeric species where the nitrogen and oxygen atoms
act as metal donors [8–11].
In the present work, the focus is on elucidating
molecular structures of mentioned-above 1a complexes
in solid state based on molecular spectroscopy methods
(IR, RA and EPR). To give detailed assignment ofvibrational spectra and consequently to solve molecular
structures we applied quantum-mechanical calculations
at the DFT level of theory. Additionally, we performed
potential energy distribution calculations (PED) to show
a detailed description of vibrational modes and atomic
charge distribution to give an explanation of the 1a an-
ionic nature (the APT population analysis).
2. Experimental
2.1. Preparation
2.1.1. Na–1aThe sodium salt of 2-cyano-2-(hydroxyimino)acetic
acid was synthesized by the reported procedure [7]. Ele-mental analysis (C, H, N) was conducted at the Faculty
of Pharmacy of Jagiellonian University according to
standard microanalytical procedures (Anal. Calc. for
Na2C3H0.7N2O3.35: C, 21.9; H, 0.4; N, 17.0. Found: C,
22.2; H, 0.7; N, 16.7%). In the microcrystalline sample,
the sodium-to-1a molar ratio (2:1) was confirmed by a
standard analytical procedure (AAS).
2.1.2. Cu–1a and Ni–1aThe complexes were prepared as described below
using 1:2 molar ratio of metal ions to 1a. An aqueous
solutions of Cu(NO3)2 Æ 2.5H2O and NiCl2 Æ 6H2O
(21.9 and 21.4 mg in 5 ml H2O, respectively) were added
to Na–1a (25 mg) dissolved in water (5 ml). In case of
the Cu–1a complex the clear dark green solution was
stirred (20 min) with heating (�35 �C) and treated drop-wise with 0.5 M HNO3 (to pH 2). The resulting green
solution was still heated and stirred (1 h) then filtered
and concentrated by evaporation at room temperature.
Dark green microcrystalline precipitate began to form
within a week. The procedure for the Ni–1a complex
was analogues. The NiCl2 Æ 6H2O–1a mixture was clear
straw-colored and after treating with 1 M KOH (to
pH 8) the solution became dark red. Finally, after afew days dark red microcrystalline powder was ob-
tained. Despite of co-precipitation of the synthesized
complexes with nitrate and chloride ions, respectively,
elemental analyses indicated clearly that the metal-to-
1a molar ratio is about (1:2).
2.2. Spectroscopy
For FT-Raman measurements, a few milligrams of
the compound was placed in capillary tube and mea-
sured directly; 512 and 3000 scans were collected (with
a resolution of 4 cm�1) for the sodium and the transition
metal ions compounds, respectively. Fourier transform
mid-infrared (FT-MIR, 256 scans) and Fourier trans-
form far-infrared (FT-FIR, 512 scans) spectra were
run in KBr and low molecular weight polyethylene discs,respectively. Resolution was set at 4 cm�1 (MIR) and
2 cm�1 (FIR). Sodium–1a salt FT-Raman spectrum
was recorded on a Bio-Rad step-scan spectrometer
(FTS 6000) combined with a Bio-Rad Raman Accessory
(FTS 40). Excitation at 1064 nm was made by a Spectra-
Physics Topaz T10-106c cw Nd:YAG laser. Raman
spectra of the copper and nickel complexes were col-
lected on a Jobin Yvon spectrometer model T6400equipped with an argon ion laser (excitation at
514.5 nm) and a CCD camera as a detector (Princeton
Instruments). FT-IR spectra were measured on Bruker
(IFS 48) and Bio-Rad (FTS 60V) spectrometers in the
mid and far IR regions, respectively. The accuracy of
the readings was ±1 cm�1.
EPR spectrum of the Cu–1a complex (the microcrys-
talline powder sample) was recorded on a Bruker spec-trometer ELEX SYS X500 [X-band (9.5 GHz)] at
298 K.
3. Computational details
B3LYP [12,13] calculations with 6-311++G(d,p) and
LanL2DZ [14,15] basis sets (for the sodium salt and thetransition metals complexes, respectively) were carried
out using the quantum-mechanical GAUSSIAN-98 set of
programs [16]. Optimum geometries and harmonic fre-
quencies were determined by using SGI 2800 computer
in the Academic Computer Center ‘‘Cyfronet’’ in Kra-
kow and on a Cray SV1ex-1-32 computer in Interdisci-
plinary Center for Mathematical and Computational
Modeling in Warsaw. No symmetry constraints wereimposed during the optimization process. At the
B3LYP/6-311++G(d,p) level a scaling factor of 0.983
was applied to the most harmonic frequencies [except
to m(OH) modes (0.953)] in order to yield the best fit
to the experimental data, as suggested by Michalska
and co-workers [17]. Raman intensities were determined
by RAINT program [18] using values of Raman scatter-
ing activities obtained from the Gaussian outputs. Thepotential energy distributions (PED) were obtained
from the Veda program [19], while atomic charge
K. Malek et al. / Polyhedron 24 (2005) 1175–1184 1177
calculations were performed using APT population
analysis (GAPT, Generalized Atomic Polar Tensor)
[20]. For the latter, the optimized geometries at the
B3LYP/LanL2DZ level of theory were used.
(d)
4. Results and discussion
The 1a complexes can exist as variety of geometrical
isomers, where a metal ion is chelated by the ligand in
the bidentate mode via the carboxylic oxygen and oxi-
mic nitrogen atoms or in the monodentate fashion via
either the carboxylate ion or the oximato fragment
(Scheme 1). Potentiometric and UV–Vis studies havesuggested that the copper complex exists as [CuHL2]
�
species at pH 2, while the nickel complex is present in
the [NiL2]2� form at pH range of 6–10. In these com-
plexes, two ligand molecules are located to each other
in the trans configuration. However, crystallographic
data of Cu(II) complex showed the dimeric structure
[8]. All discussed above molecular structures of 1a com-
plexes are presented in Scheme 1.In order to identify the molecular structures of the 1a
complexes obtained in this work we used theoretical
simulation of their vibrational spectra. It should be
emphasized that this method allows to predict a general
coordination pattern only but it is very valuable in the
case of the lack of crystallographic data. However, this
is more than enough to distinguish between cis and trans
conformation of the metallocomplex with informationwhether coordinated ligands are protonated or not.
Thus, for the purpose of this work, we considered as
models bis-chelate square planar molecules with differ-
ent conformation of the ligand (cis [MHL2]� and trans
M
O
N N
OC
C
C
C
OH O-
OO
NC CN
M
N
O N
OC
C
C
C
OH
ONC
O CN
OH C C
O N
M
O CN
O
M
ON
O
O
NC
O
O
M
NC
NMO
cis bidendate mode
trans bidendate mode
monodendate mode
dimeric mode
Scheme 1.
with the protonated [MH2L2] as well as deprotonated
oximic group [ML2]2�). However, for the sodium com-
plex we assumed that sodium ions can be coordinated
to either oximate or carboxylate moieties [MHL] or to
both of them simultaneously [M2L] (see Scheme 1).
In case of the nickel–1a complex, frequency calcula-tions at equilibrium geometries yield only real values;
hence all models correspond to local minima. The com-
parison of theoretical and experimental IR spectra in the
range of 1000–1800 cm�1 showed (Fig. 1) that [NiL2]2�
model reproduces the best obtained experimental data,
where Ni(II) coordinates to deprotonated 1a ligands in
trans configuration (Fig. 2). The deprotonation of both
ligand molecules is confirmed by the detailed analysis ofthe oximic vibrations as it is discussed below. It is clear
that there has to be a counter cation for the dianionic
form of 2-cyano-2-(hydroxyimino)acetic acid in this
structure. It is known, from our previous works
[22,24], that the type as well as the binding site of a
counterion do not effect significantly experimental and
theoretical vibrational spectra. Hence, in our models
the presence of the counterion is neglected.
(a)
(b)
(c)
Fig. 1. Comparison of theoretical and experimental IR spectra (1000–
1800 cm�1) of the 1a nickel complex: (a) cis [NiHL2]�, (b) trans
[NiH2L2], (c) trans [NiL2]2� and (d) experimental spectrum.
Fig. 2. Model structures of 1a complexes with the atom numbering used in calculations.
1178 K. Malek et al. / Polyhedron 24 (2005) 1175–1184
The same procedure was applied to determinate the
structure of the 1a complex with Cu(II) ions. The di-
meric species can be ruled out based on the EPR spec-
trum typical for a complex with orthorhombicsymmetry (g1 = 2.249, g2 = 2.188 and g3 = 2.051; cf.
Fig. 3). Frequency analysis of trans [CuL2]2� showed
one imaginary value what indicated this model to be a
transition state and excluded it finally from further stud-
ies. Moreover, the differences in experimental IR and
Raman spectra of the nickel and copper complexes evi-
dently indicates that these compounds are not isostruc-
tural. Additionally, the comparison of the calculatedvibrational spectra of the other copper complex models
with experimental IR and Raman clearly indicates that
trans [CuH2L2] form exists in solid state (see Figs. 2
and 4). Also, the presence of the protonated oximic
groups has been established by their positions in the
vibrational spectra (Section 4.3).
Fig. 3. Microcrystalline EPR spectra of the 1a copper complex at the
X band frequency at 298 K.
In case of the sodium–1a, several structures with dif-
ferent binding of this metal ion to the carboxylic and/
or oximic groups were taken into consideration. As men-
tion in Section 2 two sodium atoms are present in thiscomplex of 1a. Furthermore, despite of the elemental
analysis results (water-to-Na–1a molar ratio is 1:3),
two water molecules were added to the model structure
to mimic H-bond presented in experimental IR spectrum
(see Fig. 5). Finally, the comparison of experimental and
simulated vibrational spectra showed that both NOH
and COOH have to be deprotonated to allow coordina-
tion of two sodium ions ([Na2L] Æ 2H2O; cf. Fig. 2).
(a)
(b)
(c)
Fig. 4. Comparison of theoretical and experimental IR spectra (900–
1800 cm�1) of the 1a copper complex: (a) cis [CuHL2]�, (b) trans
[CuH2L2] and (c) experimental spectrum.
Table 1
Selected computed bond lengths [A] for 1a and its complexes with
Na(I), Ni(II) and Cu(II) ions
Bond H2L 6-311
++G(d,p)
[Na2L] Æ 2H2O
6-311++G(d,p)
[NiL2]2�
LanL2DZ
[CuH2L2]
LanL2DZ
C@O 1.199 1.254 1.263 1.236
CAO 1.347 1.298 1.339 1.342
C@N 1.287 1.316 1.357 1.305
NAO 1.359 1.292 1.300 1.393
C„N 1.154 1.157 1.189 1.181
Cox–Ccar 1.506 1.481 1.496 1.559
Cox–Ccya 1.433 1.427 1.423 1.428
MAO 2.256a 1.883b 1.920b
2.197b
2.439b
MAN 2.236 1.935 1.962
Functional groups are denoted as: ox – oximic, car – carboxylic, cya –
cyano groups and M as metal ion. Upper symbols are denoted as:
[H2L] – the fully protonated ligand; [CuH2L2], [Na2L] Æ 2H2O, [NiL2]2�
– applied models of complexes.a The oximic oxygen atom.b The carboxylic oxygens.
K. Malek et al. / Polyhedron 24 (2005) 1175–1184 1179
Geometrical parameters, charge distribution and
vibrational spectra for assigned molecular structures of
1a complexes are discussed below.
4.1. Geometry
Computed bond lengths obtained for structures of
E-isomer [H2L] of 1a and its complexes with metal ions
present here are shown in Table 1. The comparison be-
tween bond length values in all studied complexes with
the uncoordinated protonated 1a molecule shows differ-
ences mainly in ‘‘functional’’ groups coordinating to the
metal ions. The carbonyl bonds in the complexes
lengthen considerably (0.04–0.06 A) after the coordina-tion, whereas the CAO bond involved in metal ion bind-
ing shorten slightly in the transition metal complexes
(�0.01 A) and over 0.05 A in the sodium salt. This re-
sults probably from the bidentate coordination of the
sodium ion by carboxylate group. The observed trend
of changes in bond lengths for this group is typical
for many oxocarboxylic acid oximic complexes
[3,7,21,23,24].The oximic NO and CN bonds in the sodium and
nickel compounds are close to those reported for the
N-coordinated deprotonated oxime group [3–5,23]. This
(a)
(b)
(c)
Fig. 5. Mid-IR spectra (400–4000 cm�1) of (a) the 1a sodium complex,
(b) the 1a copper complex and (c) the 1a nickel complex.
indicates that the CNO� moiety exists in the nitroso-
form (CAN@O). The lengths of the oximic bonds in
the protonated copper complex are longer than those
in the 1a molecule, contrary to the deprotonated com-
plexes, where the C@N bond is elongated and the
NAO bond is shortened upon coordination. The latter
effect was observed for the cis complex of 2-hydroxyimi-
nopropanoic acid [H3CAC(COOH)@NOH, hpa] withCu(II) ion regardless of the ligand protonation state
[22]. Besides, in the 1a copper complex the elongation
of the oximic bonds supports the trans configuration
of the investigated compound like it was found for the
trans nickel hpa complex.
Regarding the cyano group, its bond lengthens upon
the complexation with all metal ions studied here. Inter-
estingly, coordination of the alkali ion causes a slightchange of the C„N length (0.003 A), whereas for tran-
sition metal ions the elongation is rather significant
(�0.03 A). Besides, the deprotonation of the oximic
group causes the decrease of the electron density of
the cyano bond, and consequently, its lengthening.
The B3LYP/LanL2DZ method predicted this bond to
be too long (cf. Table 1), but it is still close enough to
those observed in related cyanoxime complexes (1.13–1.15 A) [3–5,7].
The metal–ligand bond distances were calculated in
the range comparable to other complexes. For sodium
salt of 1a, the distances between sodium and carboxylic
oxygen atoms were calculated at 2.20 and 2.44 A. These
values are consistent with the range of 2.01–2.59 A
found for other oximic complexes with alkali metal ions.
Similarly, the Na–Noximic bond length is 2.24 A, while itstypical value is observed in the 2.22–2.54 A range
[21,25,26]. However, the comparison of calculated
1180 K. Malek et al. / Polyhedron 24 (2005) 1175–1184
metal–ligand bond lengths for proposed structures (trans
[NiL2]2� and [CuH2L2]) indicates the stronger binding of
Ni(II) than Cu(II) ion to 1a. It seems that the transition
metal ion rather than the deprotonation state of the
oximic group is responsible for this effect. As calculated
for trans [NiH2L2] isomer, the metal–nitrogen bondlengths (NiAN = 1.855 A, NiAO = 1.851 A) are still
shorter than respective bonds in [CuH2L2]. All calculated
metal–ligand bond lengths are in the range of the oximic
complexes studied so far [3–5,7,22–26].
4.2. Atomic charges
The atomic charges at all atoms in 1a at the differentprotonation stages and its complexes studied here are gi-
ven in Table 2. The effective charges at the metal ions are
reduced up on binding ligand and are +1.06 [(Cu(II)],
+0.91 and +0.86 [Na(I), for the ion bonded to the car-
boxylate and oximato groups, respectively], +0.72 a.u.
[Ni(II)]. The smallest change of the charge value in the
sodium ion is consistent with the weakest metal–ligand
interaction.As expected, the electron density on the oxygen
atoms in the deprotonated carboxylic group of 1a (de-
noted in Table 2 as [HL]�) is almost equal on both oxy-
gens. The further deprotonation of the oximic group
(see data for [L]2�) causes only a charge increase at
the carboxylic oxygens by � � 0.1 a.u. Upon coordina-
tion of the copper ion, the withdrawal of electronic
charge towards O-atom bonded to the metal ion is ex-pected and observed. The similar distribution of the
electron density on the carboxylic group is found for
the sodium salt. The difference between charges on the
O-atoms for the sodium compound is lower than for
[CuH2L2]. It results from the fact that Na(I) ion coordi-
nates to both oxygen atoms. Interestingly, a reverse
trend is observed for the nickel complex. It appears that
the deprotonation of the oximic group reduces the elec-
Table 2
Computed atomic charges [APT population analysis (GAPT)] of 1a forms a
Atom [H2L] [HL]� [CuH2L2]
Ocarboxylic �0.726 �0.873 �1.010
Ccarboxylic +1.195 +1.199 +1.266
Ocarbonyl �0.678 �0.887 �0.750
Hcarboxylic +0.349
Coximic �0.008 �0.007 +0.210
Noximic +0.251 +0.163 +0.079
Ooximic �0.543 �0.610 �0.521
Hoximic +0.333 +0.254 +0.415
Ccyano �0.003 +0.131 �0.125
Ncyano �0.185 �0.370 �0.094
M +1.059
Upper symbols are denoted as: [HL]� – ligand with the deprotonated carboa Geometry by B3LYP/LanL2DZ for all models.
tron density at the carboxylic O-atom and shifts it to-
wards the Ni-atom.
In the oximic group, the electron density is systemat-
ically shifted toward the oxygen atom. The deprotona-
tion of the carboxylic proton causes an increase of
negative charge at the NOH moiety (see data for[HL]� form of 1a). After coordination of Cu(II), the
negative charge density is accumulated on the N-atom
and partially moved towards the metal ion. Upon the re-
moval of the oximic proton the distribution of electron
density changes significantly. The C and O atoms be-
come strongly negative, whereas positive charge is accu-
mulated on the N atom. This affects the C@N and NAO
bond lengths as discussed above. These changes of thecharge distribution follow the coordination of the so-
dium and nickel ions to the fully deprotonated ligand.
Again, the largest withdrawal of the electronic charge
from the N-atom towards the metal ion is observed in
[NiL2]2�.
It is worth to look at the charge distribution of the cy-
ano group. Upon the deprotonation of the carboxylic
proton, the negative charge of the N-atom increases by0.18 a.u. whereas a charge at the C-atom decreases by
0.13 a.u., due to the withdrawing electron character of
C„N. After coordination of Cu(II), the electron density
flows from the N-atom through the cyano carbon to-
wards the remaining fragment of the ligand. However,
the deprotonation of the oximic proton causes more io-
nic character of the cyano bond than in the [HL]� form.
This group behaves as an electron donating substituentin coordination of sodium and nickel ions. Regardless
the coordination mode and the type of a metal ion,
the same effective charge (�0.08 a.u.) is shifted from
C„N towards the adjacent oximic C-atom. Further-
more, the difference between the effective charges at
the carbon and nitrogen atoms in C„N follows the
trend: [CuH2L2] (0.03 a.u.), [Na2L] Æ 2H2O (0.55 a.u.)
and [NiL2]2� (0.99 a.u.). It worth to note that this differ-
nd its complexes with metal ions [M@Na(I), Ni(II) and Cu(II)]a
[L]2� [Na2L] Æ 2H2O [NiL2]2�
�0.968 �1.229 �0.871
+1.206 +1.433 +1.264
�0.979 �1.052 �0.925
�0.518 �0.413 �0.535
+0.332 +0.376 +0.611
�0.779 �0.792 �0.694
+0.405 +0.169 +0.388
�0.699 �0.381 �0.599
+0.911 +0.724
+0.858
xylic group; [L]2� – the fully deprotonated ligand.
(a)
(b)
(c)
Fig. 6. Far-IR spectra (50–400 cm�1) of (a) the 1a sodium complex,
(b) the 1a copper complex and (c) the 1a nickel complex.
K. Malek et al. / Polyhedron 24 (2005) 1175–1184 1181
ence for models [CuL2]2� and [NiH2L2] are 0.97 and
0.01 a.u., respectively. It clearly indicates that polariza-
tion of the cyano group strongly depends on the depro-
tonation of the oximic group only. That can be traced in
vibrational properties of this group as will be shown
below.
4.3. Vibrational spectra
The calculated and experimental vibrational frequen-
cies and assignments of the characteristic modes for all
investigated complexes are summarized in Table 3 (full
description of the internal coordinates and vibrational
spectra are given in the Supplementary Material, TablesI–VI). Experimental (IR and Raman) spectra of the
complexes are shown in Figs. 5–7. It should be empha-
sized that the simulated spectra refer to the isolated mol-
ecule at 0 K, whereas the assignments are made for the
vibrational spectra of the solid state. Thus, some differ-
ences in the calculated versus experimental frequencies
or intensities are most probably caused by intermolecu-
lar interactions (crystal packing) or by anharmonicity ofvibrations. Vibrational modes which are of great impor-
tance in the determination of discussed molecular struc-
tures are shown below.
4.3.1. m(OH) and d(OH)
The IR spectra of all compounds exhibit broad
absorption bands with maxima at 3456 and 3234 [Na–
1a], 3450 [Cu–1a] and 3430 cm�1 [Ni–1a] (cf. Fig. 5).These are assigned to the stretch vibration of the oximic
OH (in the copper complex) as well as free or weakly H-
bonded hydrated water molecules in the other com-
plexes. Calculations for the applied models predict the
presence of those vibrations at 3720, 3719, 3265 and
2983 cm�1 [mðOHÞH2O] for the sodium salt (cf. Fig. 2)
and at 3496 and 3499 cm�1 [m(OH)ox] for the copper
complex. Additionally, calculations of vibrational spec-tra for Ni and Cu complexes with hydrated waters
showed that mðOHÞH2Oshould appear in the men-
tioned-above experimental range (data not shown).
Moreover, bands at �1620 cm�1 are characterized by
significant values of FWHM resulting from the presence
of bending modes of H2O [d(OH)]. Hence, we can con-
clude that water molecules are not directly coordinated
to the complex structures. Furthermore, the absence ofIR absorptions characteristic for water molecules lo-
cated in the first coordination sphere of a complex con-
firms this assumption (at �900 and �770 cm�1, the
rocking and the wagging vibrations of the OH group,
respectively).
4.3.2. m(C„N)
The stretches modes of cyano bond in the IR and Ra-man spectra of the 1a complexes (cf. Table 3) definitely
indicate the shortening of this bond in the following or-
der: Na–1a, Ni–1a and Cu–1a. The mode frequencies of
the sodium and nickel compounds are typical for theircoordination motifs [3,5]. However, a participation of
the C„N group in the metal binding may be suggested
by the high-shift of the C„N stretch (2242 cm�1, Ra-
man spectrum, see Fig. 7(b)) for the cooper complex
comparing to the latter. Surprisingly, IR and Raman
intensities for this complex are very low, in the contrary
to the other complexes. That is due to the electron den-
sity distribution. As showed above, the smallest polari-zation of the cyano bond is observed for [CuH2L2].
4.3.3. mas(COO) and ms(COO)
A characteristic features of the vibrational spectra of
the 1a complexes is the lowering of frequencies of the
asymmetric carboxylate stretching [mas(COO)] down to
�1610 cm�1. Thus, the change in these mode frequen-
cies can be attributed to the deprotonation of the car-boxylic group as well as the ability to bind the metal
centers. The position of this band in the sodium complex
is typical for the alkali complexes of hpa [21]. That
clearly indicates the absence of a significant influence
of the withdrawing electron cyano group on the coordi-
nation fashion by the carboxylate anion. Furthermore, a
Table
3
Computed[withpotentialenergydistribution(PED,%)]andexperim
entalIR
andRamanfrequencies
(incm
�1)oftheselected
stretchingmodes
forsodium,nickel
andcopper
complexes
of1a
Mode
Na–1a(exp.)
[Na2L]Æ2H
2O
(calc.)
[NiL
2]2�(exp.)
Ni(1a) 2
(calc.)
Cu–1a(exp.)
[CuH
2L2](calc.)
IRRaman
IR/R
aman
IRRaman
IRRaman
IRRaman
IRRaman
m(C„
N)
2209
2208
2275[90]
2226
2229
2210[63]a
2212[62]b
2242
2281[86]a
2281[86]b
m as(COO)
1613
1611
1538[81]
1619
1645
1605[84]a
1614[81]b
1649
1668
1691[64]a
1695[83]b
m s(C
OO)
1383
1381
1359[36]
1152
1160
1126[22]a
1130[36]b
1110
1165
1154[56]a
1143[60]b
1140
1144
1136[30]
m(C@N)
1440
1444
1454[69]
1489
1496
1431[73]a
1423[74]b
1649
1650
1674[48]a
1678[66]b
m(NO)
1214
1211
1260[70]
1252
1263
1269[42]a
1275[45]b
1050
1045
1048[53]a
1038[56]b
m(M–N)
307
294[32]
357
373[46]a
202[12]b
330
344[41]a
156[53]b
m(M–O)
330c
330c
337[46]c
307d
294[23]d
408
356
427[48]a
316[18]b
363
376[39]a
290[41]b
161d
162d
165[19]d
aIn-counter-phase.
bIn-phase.
cTheoxim
icoxygen
atom.
dThecarboxylicoxygens.
(a)
(b)
(c)
Fig. 7. Raman spectra (50–2500 cm�1) of (a) the 1a sodium complex,
(b) the 1a copper complex, (c) the 1a nickel complex.
1182 K. Malek et al. / Polyhedron 24 (2005) 1175–1184
smaller low-frequency shifts of this vibration for 3-d me-tal ions complexes support bidentate coordination of the
2-cyano-2-(hydroxyimino)acetate anion to metal center.
Similar behavior has been found previously for other
transition metals oximates [22]. Additionally, the vibra-
tional spectra of those complexes exhibit the splitting of
the COO stretching vibration. The in-counter-phase
modes are observed in IR whereas the in-phase counter-
parts are present in the Raman spectrum. That is consis-tent with the proposed model where two ligands in trans
configuration coordinate to the metal ion (see Table 3).
Moreover, the deprotonation of the oximic group but
not a metal ion [Cu(II) versus Ni(II)] seems to
be responsible for the lower shift-frequency of the
mas(COO) in the nickel complex. The IR frequency of
the latter is almost the same as for the sodium salt with
the deprotonated [email protected] to the DFT results, the symmetric stretch-
ing mode [ms(COO)] appears mainly in the range of
1165–1110 cm�1 with its relatively small contribution
in the normal mode (22–60% PED). Merely, the spectra
of Na–1a exhibit additional bands in the typical
frequency range for ms(COO), at �1381 cm�1 with 36%
participation of this vibration.
K. Malek et al. / Polyhedron 24 (2005) 1175–1184 1183
4.3.4. m(C@N) and m(NAO)
The positions of the m(C@N) and m(NO) vibrations in
IR and Raman spectra are dependent to a great extend
on the oxime or nitroso character of this group in a par-
ticular compound and are reflected by the coordination
mode. The vibrational spectra of the sodium and nickelcomplexes exhibit a significant shift of m(C@N) to lower
frequencies, at �1440 and �1490 cm�1, for Na–1a and
Ni–1a, respectively. That clearly indicates that 1a ap-
pears in these complexes as a nitroso-containing anion.
The lower shift of the band of the sodium salt results pri-
marily from a participation in coordination of the oxi-
mic oxygen atom. DFT fully confirms this assignment
(1454 cm�1, 69% PED). The m(C@N) of the nickel com-plex is found in our experiment in the similar range as
for the Ir(III) and Ru(II) complexes of other a-hydrox-yiminocarboxylic acids with the deprotonated oximic
group (1515–1495 cm�1) [23]. On the other hand, the
C@N stretch vibration of the copper complex is assigned
to the band at 1650 cm�1 in the Raman spectrum
[1678 cm�1 (66% PED) calculated]. This frequency indi-
cates that oximic not nitroso group takes part in Cu(II)coordination.
The high-frequency shift of the m(NO) modes in the
vibrational spectra of Na(I) and Ni(II) compounds
confirms additionally that these metal ions are bonded
to the ligand by the nitrogen atom of the nitroso group
(cf. Table 3). B3LYP predicts positions of this mode
very well, with an error less than 4.0%. Additionally,
the simulated spectra of the nickel complex exhibitthe different position of the mode in IR (1269 cm�1)
and Raman (1275 cm�1) spectra, respectively. The
same has been observed in the experimental spectra
and results from the trans ligand conformation. The
difference is equal to 9 cm�1. The most pronounced
feature of vibrational spectra of the copper complex
is in their very low frequencies of the m(NO) vibrations
(1050 and 1045 cm�1 in IR and Raman, respectively)comparing to Na–1a and Ni–1a. Thus, the positions
of these bands are consistent with the protonated trans
structure.
4.3.5. Metal–ligand vibrations
The frequency region below 500 cm�1 provides
information on the metal–ligand stretch vibrations.
The far IR and Raman spectra of the complexes pres-ent here in this particular range are shown in Figs. 6
and 7. The IR absorptions at 307, 330 and 357 cm�1
are assigned to the metal–nitrogen stretching vibration
of Na, Cu(II) and Ni(II) complexes, respectively. The
contribution of this vibration to the normal modes is
less than 50%, as predicted by calculated PEDs (cf.
Table 3). As expected, the coordination by the oximic
nitrogen atom of the s-type metal ions is considerablyweaker. Similar observation has been found for the
metal-carboxylic oxygen stretch modes. Moreover,
the comparison of frequencies of Na–Ooximic with
Na–Ocarboxylic indicates the stronger coordination this
alkali ion by the nitroso moiety than by the carboxyl-
ate anion.
5. Conclusions
The experimental IR and Raman spectra of solid
state supported by the DFT calculations have shown
that the transition metal complexes of 2-cyano-2-
(hydroxyimino)acetic acid have trans bidendate square-
planar geometry with the different protonation state of
the oximic group. This is similar to their structures insolution determined previously by our potentiometric
and spectroscopic studies [8]. However, two sodium ions
are bonded to the carboxylate as well as oximate moie-
ties. Vibrational analysis has clearly indicated the bind-
ing nature of the oximic and carboxylic oxygen atoms
and the oximic nitrogen atom. It also shows the presence
of the nitroso form of the oximic group in Ni–1a and
Na–1a. Furthermore, the latter effects the coordinationstrength in all complexes presented. Namely, this causes
the increase of the stability of the nickel complex com-
paring to the copper one and the binding ability of the
oximic group comparing to the carboxylic one in Na–
1a. The magnitude of all stretch vibrations has been
shown to be well correlated with the atomic charge dis-
tribution. The calculations of atomic charges have sug-
gested that the deprotonation of the carboxylic groupdoes not change significantly the electronic distribution
in the 1a molecule, whereas the removal of the oximic
proton causes the accumulation of the positive charge
on the oximic nitrogen. Moreover, the electron density
is shifted from the metal ion towards the carboxylic oxy-
gens in the copper and sodium complexes in reverse to
Ni–1a. And in the oximic group, the N-atom is an elec-
tron donor for metal ions.
Acknowledgments
The authors thank Academic Computer Centre
CYFRONET of the University of Science and Technol-
ogy in Krakow (grant no. KBN/SPP/UJ/027/1999) and
Interdisciplinary Center for Mathematical and Compu-tational Modeling of Warsaw University in Warsaw
(grant no. G25-8) for the possibility to perform neces-
sary calculations.
Appendix A. Supplementary data
Supplementary data associated with this article can
be found, in the online version at doi:10.1016/
j.poly.2005.04.007.
1184 K. Malek et al. / Polyhedron 24 (2005) 1175–1184
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