antibacterial activity of the root extracts of garcinia kola
New evidence on the origin of mangosteen (Garcinia mangostana L.) based on morphology and ITS...
Transcript of New evidence on the origin of mangosteen (Garcinia mangostana L.) based on morphology and ITS...
RESEARCH ARTICLE
New evidence on the origin of mangosteen (Garciniamangostana L.) based on morphology and ITS sequence
M. Nazre
Received: 5 November 2013 / Accepted: 5 February 2014 / Published online: 19 February 2014
� Springer Science+Business Media Dordrecht 2014
Abstract Mangosteen (Garcinia mangostana L.),
known as one of the most desirable tropical fruits of
Southeast Asia, has been considered as an obligate
agamospermous hybrid, thought to have arisen from
two wild species, G. celebica L. (syn. G. hombroniana
Pierre) and G. malaccensis Hook. f. However, this
putative origin was based on a misidentification of
G. malaccensis, which was confused for G. penangi-
ana Pierre. Intensive field studies and molecular
investigations based on internal transcribed spacer
(ITS) sequence data of 22 samples were conducted,
which included six samples of true G. malaccensis.
Morphological observation shows that mangosteen
highly resembles G. malaccensis, particularly in its
vegetative and fruit characters, even sharing similar
taste of ripe fruits. ITS data revealed that mangosteen
shared more than 99 % of its sequence with
G. malaccensis with a few accessions identical with
wild populations in Peninsular Malaysia. Phylogenetic
analysis revealed that clades of mangosteen are
paraphyletic per se, but monophyletic if both
mangosteen and G. malaccensis are grouped together.
This show that mangosteen and G. malaccensis are so
closely related that they should be combined together
as one species. I propose two theories on the origin of
mangosteen, first, that it is a hybrid of different
varieties of G. malaccensis, and second, that it may be
a product of multiple, superior selections from differ-
ent populations of female trees of G. malaccensis
originating in Peninsular Malaysia.
Keywords Garcinia malaccensis � Garcinia
mangostana � Peninsular Malaysia �Wild
relatives
Introduction
Mangosteen (Garcinia mangostana L.), locally known
in South East Asia as ‘‘manggis’’, is one of the most
desirable local fruits, occasionally it is even called
‘‘queen of fruits’’. The species was recognised by
Linnaeus (1753) when L. Garcin’s (1733) description
was made available to him, and, in honour of Garcin,
Linnaeus named the species as Garcinia mangostana
in the family Guttiferae (Clusiaceae). In recent years,
mangosteen has been planted in many other tropical
areas, such as Northern Australia, South America and
tropical Africa, but the major producing countries of
mangosteen are still in Southeastern Asia, namely
Thailand, Malaysia, the Philippines and Indonesia
(Cruz 2001).
M. Nazre
Laboratory of Plant Systematics, Department of Biology,
Graduate School of Science, Chiba University, 1-33
Yayoi-chu, Inage-ku, Chiba 263-8522, Japan
M. Nazre (&)
Herbarium Faculty of Forestry, Universiti Putra Malaysia
(UPM), 43400 Serdang, Selangor, Malaysia
e-mail: [email protected]; [email protected]
123
Genet Resour Crop Evol (2014) 61:1147–1158
DOI 10.1007/s10722-014-0097-2
Theories on the origin of mangosteen are rather
interesting. Richards (1990b) notes the most crucial
controversy, whether mangosteens could be found in
the wild. Historically, the only published report on the
existence of wild mangosteen was by Corner (1940),
but this was refuted by Whitmore (1973) who
re-identified specimens collected by Corner from
the state of Terengganu, Malaysia, as Garcinia
malaccensis Hook. f. In the absence of documented
wild populations, an analysis of earlier reports and
cytological information (Krishnaswamy and Raman
1949; Tixier 1953; Ha et al. 1988; Richards 1990a),
led Richards (1990b) to suggest that apomictic
mangosteen arose from hybridization between two
wild species, G. celebica L. (syn. G. hombroniana
Pierre, see Nazre (2010)) as the male parent, and
G. malaccensis as the female. His claim was consis-
tent with the work of Ridley (1922) and Whitmore
(1973), who also notes that mangosteen morpholog-
ically resembles two wild species in Peninsular
Malaysia, G. malaccensis and G. celebica. While
the identity of G. celebica or seashore mangosteen is
widely recognised, information about G. malaccensis
is not fully known, apart from information on herbar-
ium specimens, and the identity of G. malaccensis had
not thoroughly been checked by previous authors,
which suffered from a classic case of species
misidentification. For example, Ha et al. (1988)
misidentified G. penangiana Pierre from Pasoh Forest
Reserve, Malaysia as G. malaccensis for their cyto-
logical studies, and, subsequently, this information
was used by Richards (1990b) who claimed that
mangosteen was probably allopolyploid with respect
to its related taxon, G. hombroniana (= G. celebica),
and the misidentified G. penangiana. More recent
morphological, anatomical and molecular analyses
showed that G. malaccensis in Pasoh Forest Reserve
should be treated as G. penangiana (Nazre 2000,
2006; Nazre et al. 2007, 2009). Similar misapplication
of G. malaccensis for G. penangiana could also be
found in the works of Saw et al. (1991), Kochummen
(1997), Thomas (1997) and Abdullah et al. (2012).
And, with regard to the exact ploidy level for
mangosteen, numbers are uncertain, with reported
somatic chromosomal counts ranging from 56 to 96
(Krishnaswamy and Raman 1949; Tixier 1953; Kaur
et al. 1978; Ha et al. 1988; Soepadmo 1989).
Since it was widely accepted that mangosteen is a
hybrid, although attempts to backcross with
mangosteen and G. celebica/G. malaccensis have not
succeeded, Richards (1990b) speculated that mango-
steen might be an offspring of a single event, but he
also suggested that there was a possibility that the
cross might have occurred on more than one occasion.
Yapwattanaphun et al. (2004) agreed with the single
hybrid ancestor theory based on amplified fragment
length polymorphism (AFLP) data, and they sug-
gested that any genetic variation in mangosteen
resulted from somatic mutation. However, Ramage
et al. (2004), who investigated 37 accessions of
mangosteen with a randomly amplified DNA finger-
printing (RAF) technique, disagreed with the single-
origin theory and suggested two alternatives. The first
possibility was that mangosteen might have arisen
from independent hybridization events, and multiple
hybrids were selected for cultivation. And the second
view postulated that related backcrossing events
occurred between a male and a closely related female
tree of the respective species.
Although mangosteen has been considered an
obligate agamospermous apomictic, as proposed by
Richards (1990b), molecular data have proven that
there is considerable genetic variation among its
cultivars (Ramage et al. 2004; Sando et al. 2005;
Sobir et al. 2011) and stable phenotypic variation has
also been confirmed in Malaysia (Osman and Milan
2006) and Indonesia (Mansyah et al. 2010). Today in
Peninsular Malaysia, there are two types of mango-
steen that are being planted, one with normal globose
fruits and another with odd ovoid-shaped fruits,
known as masta (Osman and Milan 2006; Raziah
et al. 2007). Phenotypic differences could result from
environmental differences, geographic adaptation, or
cultural practices such as pruning techniques and the
shading of trees. Alternatively, they may have a
genetic basis via natural mutation and, if the data on
cytology are correct, chromosomal instability may
also occur and directly contribute to morphological
variation (Ramage et al. 2004). However, there is also
the possibility that mangosteen could be a facultative
apomict, in which sexual reproduction sometimes
occurs. Male individuals of mangosteen have been
reported by Burkill (1935), Idris and Rukayah (1987)
and Osman and Milan (2006). The rarity of males may
be related to the cultural practice of cultivators in
Peninsular Malaysia (and Southeast Asia in general)
who chop down any male fruit trees because they
believe they are of no benefit. A male tree reported by
1148 Genet Resour Crop Evol (2014) 61:1147–1158
123
Idris and Rukayah (1987) suffered the same fate, as
documented by a research team from the National
University of Malaysia (UKM) that visited the village
where it had been seen and found that it had been
chopped down because the villager felt it was not
worth keeping. Earlier, Burkill (1935) had also noted
that villagers in Indochina had practised the same
action.
Taxonomically, mangosteen is grouped within
Garcinia L. section Garcinia, suggesting that all
members of section Garcinia should be closely related
to mangosteen (Jones 1980; Nazre 2006; Sweeney
2008). However, Sando et al. (2005), Sobir et al.
(2011) and Abdullah et al. (2012), all showed that G.
celebica is so genetically distant as to be an unlikely
parent for mangosteen. Abdullah et al. (2012) further
noted that another wild species, G. opaca King (syn. of
G. diospyrifolia Pierre), is the closest relative of
mangosteen without realising that her data actually
demonstrated that G. penangiana (because of misi-
dentification as G. malaccensis) was the closest
relative of mangosteen. Earlier, Nazre et al. (2007)
also found that among the cultivated Garcinia of
Peninsular Malaysia, mangosteen was most closely
related to G. penangiana. Based on samples from
Thailand, Malaysia and cultivated trees in Java,
Yapwattanaphun et al. (2004) concluded that of the
17 species of Garcinia they studied, mangosteen was
more closely related to G. malaccensis than to G.
celebica. Similar results were obtained by Nazre
(2006), Sweeney (2008) and Sobir et al. (2011), where
phylogenetic trees showed that G. malaccensis is a
sister taxon to mangosteen.
It was clearly shown that two sister taxa,
G. malaccensis and G. penangiana, are the closest
species to mangosteen rather than G. celebica, but
there are no comprehensive studies to date that include
these sister taxa. This is understandable because
samples of G. malaccensis are not easily obtained,
considering its limited geographic distribution in
Peninsular Malaysia, Sumatera and Borneo, and
difficulty in identifying it in the field, especially in
the absence of flowers and fruits. As for G. penangi-
ana, it is a common species that can be found from
southern Thailand to Sulawesi and is easily identified,
except that it was long confused with G. malaccensis.
This current study was designed to provide new
evidence on the origin of mangosteen based on
morphological and molecular variation, incorporating
multiple samples of G. malaccensis and G.
penangiana.
Materials and methods
Morphological investigation was done by using her-
barium specimens kept at E, K, KEP, L, BO, SAN,
SAR (for abbreviations see Thiers), and the herbarium
of the Malaysia Agriculture Research and Develop-
ment Institute (MARDI) to compare G. mangostana,
G. malaccensis and G. penangiana, specimens of
different populations for mangosteen, G. malaccensis
and G. penangiana throughout the Malaysian forests
collected by ourselves. Voucher specimens were made
and are kept in the UPM herbarium. Important
characters for species delimitation, as mentioned by
Whitmore (1973), i.e., male flowers, fruits and veg-
etative characters, such as latex differences, were
observed and compared. In order to do that, morpho-
logical characters were examined by careful observa-
tion of specimens with the help of a hand-lens or stereo
microscope. All informations including qualitative
and quantitive measurement were scored in the
PADME database system, developed at Royal Botanic
Garden Edinburgh (RBGE).
For molecular analysis, internal transcribed spacer
(ITS) was chosen for sequencing because nucleotide
sequence variation found within the ITS region have
often been well-suited for comparing related species
(Soltis and Soltis 1998) and for broader applications,
including DNA barcoding (Li et al. 2011). In Garci-
nia, previous studies (Sari 2000; Yapwattanaphun
et al. 2004; Nazre 2006; Nazre et al. 2007; Sweeney
2008; Abdullah et al. 2012) solely based on ITS
variation have reported well-resolved phylogenetic
trees that were able to differentiate among species. My
initial DNA work was carried out in Royal Botanic
Gardens Edinburgh, and further experiments and
analyses were done in the Systematics Lab, Chiba
University, Japan. I used 23 accessions of Garcinia for
molecular analysis (Table 1), including 11 ITS
sequences obtained from GenBank. Garcinia atrovir-
idis Griff. ex T. Anders. in section Brindonia
(Thouars) Choisy was chosen as an outgroup. All
DNA samples were extracted from mature fresh
leaves preserved in silica gel by using the CTAB
(Cetyltriammonium bromide) extraction buffer
following the protocol of Doyle and Doyle (1990).
Genet Resour Crop Evol (2014) 61:1147–1158 1149
123
PCR amplification was performed by using ITS
primers as described by White et al. (1990). Cycle
sequencing was performed with an ABITM Big Dye
terminator Cycle Sequencing system (Applied Biosys-
tems Inc., Foster City, California, USA) and analysed
on the ABI3100 (Applied Biosystems Inc., USA).
Sequences were aligned with CLUSTAL X (Thomp-
son et al. 1997) and refined and checked manually by
using BIOEDIT. Analyses to find the most parsimo-
nious trees were run with PAUP* Ver. 4.0b10 for
Windows (Swofford 2003), using ‘Heuristic’ search
under the Fitch (1971) parsimony criterion where
character-state changes were weighted equally and
unordered. Two rounds of heuristic searches were
performed. The first search involves multiple repli-
cates, each of which has two stages: (1) the initial tree is
obtained by connecting the taxa one at a time by using
stepwise addition and additional taxa are then added in
random order; (2) to search for more parsimonious
trees, branches were swapped by using tree bisection
reconnection (TBR). To evaluate the confidence values
of the clades, 100,000 bootstrap replicates (Felsenstein
1985) were then carried out with simple addition of
sequences and TBR branch-swapping. All trees pro-
duced from the parsimony search were visualised via
TreeView 1.6.6 (Page 1996).
Results
Morphological variation
Morphologically, mangosteen trees are easily distin-
guishable from G. malaccensis or G. penangiana.
Based on the colour of their bark, mangosteen bark is
lighter than the dark grey brown bark of G. malaccensis
or the dark brown of G. penangiana. Leaves of
G. penangiana are a bright reddish colour when dry,
Table 1 List of species and accession used in this study
Species Locality/origin GenBank/DDBJ* no. Author/[collectors-voucher deposited]
1. G. mangostana SAM South America AJ 509214 see Gehrig et al. (2003)
2. G. mangostana PM1 Peninsular Malaysia AF 367215 see Nazre et al. (2007)
3. G. mangostana PM2 Peninsular Malaysia AB 110808 see Yapwattanaphun et al. (2004)
4. G. mangostana PM3 Peninsular Malaysia AB856024* [Shamsul Khamis SKMY10 (UPM)]
5. G. mangostana MASTA Peninsular Malaysia AB856025* [Rosslan 11 (UPM)]
6. G. mangostana JAV Java Island AB 110807 see Yapwattanaphun et al. (2004)
7. G. mangostana TH1 Thailand AB 110809 see Yapwattanaphun et al. (2004)
8. G. mangostana TH2 Thailand AB 110810 see Yapwattanaphun et al. (2004)
9. G. mangostana TH3 Thailand AB 110811 see Yapwattanaphun et al. (2004)
10. G. mangostana LAO Laos AB856023* [Newman s.n. (E)]
11. G. malaccensis MY1 East coast, Peninsular Malaysia AB856027* [Nazre BB04 (UPM)]
12. G. malaccensis MY2 East coast, Peninsular Malaysia AB856028* [Nazre BB08 (UPM)]
13. G. malaccensis MY3 East coast, Peninsular Malaysia AB856029* [Nazre BB09 (UPM)]
14. G. malaccensis MY4 North East, Peninsular Malaysia AB856026* [Nazre 23 (UPM)]
15. G. malaccensis MY5 South, Peninsular Malaysia AB856030* [Nazre 18 (UPM)]
16. G. malaccensis SUM1 Sumatra, Indonesia AB 110805 see Yapwattanaphun et al. (2004)
17. G. malaccensis SUM2 Sumatra, Indonesia AB 110806 see Yapwattanaphun et al. (2004)
18. G. malaccensis SBH Sabah, Malaysia AB856031* [Nazre SP01 (UPM)]
19. G. penangiana 1 West Peninsular Malaysia AF 367226 see Nazre et al. (2007)
20. G. penangiana 2 East Peninsular Malaysia AB856033* [Nazre BB07 (UPM)]
21. G. diospyrifolia West, Peninsular Malaysia AF 367227 see Nazre et al. (2007)
22. G. celebica Peninsular Malaysia AB856032* [Nur.03 (UPM)]
23. G. atroviridis Peninsular Malaysia AF 367211 see Nazre et al. (2007)
Asterisk denotes sequences that were submitted to DDBJ
Without asterisk sequences refers to GenBank accessions
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compared with mangosteen or G. malaccensis with
yellowish green to brown colour. Intramarginal vein is
present and located close to the leaves margin for
mangosteen and G. malaccensis but is absent on the
leaves of G. penangiana. Glandular lines which only
run in one direction from the midrib to the leaf margin,
across the secondary veins, are fine and widely spaced
for mangosteen and G. malaccensis, but G. penangiana
has very fine and closely spaced glandular lines.
Exudate or latex colour, however, is similar between
mangosteen and G. malaccensis which are both
yellow, but G. penangiana has whitish latex. The
morphological comparison of mangosteen with its
closest relatives are summarised in Table 2, and details
on the two most important characters, i.e., fruits and
male flowers, are noted below.
Male flower
Male mangosteen stamen bundles are 4-angled
surrounding the base of a prominent fungiform
pistillode (Fig. 1a, b). In contrast, male flowers of
G. malaccensis have slightly 4-angled or conical- or
cylindrical-shaped stamen bundles, either tipped by a
smaller pistillode or the pistillode is absent (Fig. 1b, c).
Garcinia penangiana (Fig. 1d) strictly lacks pistill-
odes, and its stamen bundles are somewhat shorter and
cruciform-shaped.
Fruit
The fruit colour for mangosteen and G. malaccensis
is similar, even when the fruits are ripening. When
young and unripe, the fruit is greenish yellow, then
turning reddish-pink and finally purplish black
when ripe (Fig. 2a, b). The fruits of these two
species can only be differentiated by comparing
their stigma bundles; G. malaccensis has coarse
corrugated surfaces compared to smooth surfaces
for mangosteen (Fig. 2b), except for the masta type,
with its distinctly ovoid fruit and protruding stigma
Table 2 Comparison of
important morphological
characters for Garcinia
penangiana, G. malaccensis
and G. mangostana
(mangosteen)
Characters Species
G. penangiana G. malaccensis G. mangostana
(mangosteen)
Male flowers
Petals colour No information Pinkish red Pinkish red
Pistillode Absent i. Absent Fungiform c. 5 mm
ii. Fungiform c. 2 mm
Stamens Cruciform i. Slightly 4-angled 4-angled
ii. Conical-cylindrical
Fruits
Colour (ripe) Reddish pink i. Yellowish red Purple-black
ii. Reddish pink
iii. Purple-black
Shape i. Ovoid i. Ovoid i. Ovoid
ii. Globose ii. Ellipsoid ii. Ellipsoid
iii. Globose iii. Globose
Stigma (bundles) Nodule-like surface Corrugated surface Rather smooth surface
Taste Sour Sweet–sour Sweet–sour
Leaves
Colour (dry
specimens)
Reddish brown Yellowish green to
brown
Yellowish green to
brown
Secondary nerves No intra marginal
veins
With intra-marginal
veins
With intra-marginal
veins
Glandular lines Very fine, closely
spaced
Fine, widely spaced Fine, widely spaced
Exudates White Yellow Yellow
Genet Resour Crop Evol (2014) 61:1147–1158 1151
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bundles with their surfaces closely resembling those
of G. malaccensis but slightly smoother (Fig. 2c).
For G. penangiana, the fruit shape is ovoid or
globose with fewer stamen bundles that are widely
spaced and display a nodule-like surface, easily
differentiated from G. malaccensis or mangosteen
(Fig. 2d).
Sequence analysis
ITS sequence data showed that sequences of mango-
steen and G. malaccensis produced 617 bp of partial
sequence of ITS1 and ITS2, and a complete sequence
of the 5.8S region. The close similarity of ITS
sequences among mangosteen and G. malaccensis
Fig. 1 Variation of male flowers; a and b G. mangostana L.
with 4-angled stamen bundles and dwarf-fungiform pistillodes;
c G. malaccensis Hook. f. with conical-cylindrical stamens
bundles tipped with small pistillodes; d G. malaccensis with
slightly 4-angled stamen bundles tipped with small pistillodes
(left) and without stamen bundles without pistillodes (right);
e G. penangiana Pierre with cruciform-like stamen bundles
without any pistillodes
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accessions can be seen in the distance matrix gener-
ated from PAUP with values ranging from only 0.16 to
0.33 % (Table 3). Nine substitution sites were
detected from 18 individuals at positions 26, 115,
180, 200, 250, 444, 490, 527 and 616 (Fig. 3). There
are four groups within mangosteens based on nucle-
otide substitutions. The first group, LAO, JAV, TH1,
TH2, TH3, PM2 and PM3, has unique M4 substitu-
tions sites, while the second group with only one
member, SA, has a deletion at M5 and unique M9
substitution sites. The third group (MASTA), how-
ever, shared nucleotide sequences with G. malaccensis
P4, and the last group, PM1, shared similar ITS
sequences with a group of G. malaccensis including
P1, P2 and P3 (Fig. 3).
For G. malaccensis, differences of base substitu-
tions are observed that may reflect differences in
geographic distribution; for instance, the group con-
taining P1, P2, and P3 all were collected from the east
coast of Peninsular Malaysia. Accession P4 (which
shares sequences with the masta form of mangosteen)
has a unique base substitution, M8, is found in
northern part of east coast of Peninsular Malaysia;
P5, collected from southern Peninsular Malaysia,
groups together with SM1 and SM2 of Sumatera
origin (but cultivated in Bogor) has a unique substi-
tution, M2; and Bornean G. malaccensis SBH from
state of Sabah, Malaysia displays the unique substi-
tution site, M7 (Fig. 3).
Phylogenetic analysis of these ITS sequences was
done by incorporating sequenced data from closely
related taxa from section Garcinia, namely G. penan-
giana, G. diospyrifolia Pierre, G. celebica, and
rooted with data from G. atroviridis (Garcinia sect.
Brindonia). The resulting cladogram (Fig. 4) showed
that clades of mangosteen and G. malaccensis formed
a monophyletic group with considerably high boot-
strap values (81 %) in parsimony analysis (Fig. 4).
However, separate clades for mangosteen and
G. malaccensis have low support from bootstrap
values because of the high degree of shared ITS
sequences among these accessions. As expected, the
closest sister taxon with this group is G. penangiana,
not G. diospyrifolia or G. celebica. All mangosteens
with the unique base substitution M4 (LAO, PM2,
PM3, TH1, TH2, JAV) clustered together in clade
Fig. 2 Variation of fruits of G. mangostana L. (mangosteen),
G. malaccensis Hook. f. and G. penangiana Pierre; a indistin-
guishable mangosteen and G. malaccensis fruits; b stigma
bundles with corrugated surfaces for G. malaccensis (left) and
smooth surfaces for G. mangostana (mangosteen); c protruding
and weakly corrugated stigma-bundle surfaces of mangosteen-
masta with a distinct ovoid shape; d widely spaced stigma
bundles in G. penangiana
Genet Resour Crop Evol (2014) 61:1147–1158 1153
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Table 3 Distance matrix from Internal Transcribed Spacer (ITS) sequences for G. mangostana (mangosteen) and G. malaccensis
1 2 3 4 5 6 7 8 9 10 11
1. G. mangostana LAO –
2. G. mangostana TH3 0.0000 –
3. G. mangostana JAV 0.0000 0.0000 –
4. G. mangostana TH1 0.0000 0.0000 0.0000 –
5. G. mangostana TH2 0.0000 0.0000 0.0000 0.0000 –
6. G. mangostana PM2 0.0000 0.0000 0.0000 0.0000 0.0000 –
7. G. mangostana PM3 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 –
8. G. mangostana PM1 0.0016 0.0000 0.0016 0.0016 0.0016 0.0016 0.0016 –
9. G. mangostana SAM 0.0033 0.0016 0.0033 0.0033 0.0033 0.0033 0.0033 0.0016 –
10. G. mangostana MASTA 0.0032 0.0016 0.0032 0.0032 0.0032 0.0032 0.0032 0.0016 0.0033 –
11. G. malaccensis MY4 0.0032 0.0016 0.0032 0.0032 0.0032 0.0032 0.0032 0.0016 0.0033 0.0000 –
12. G. malaccensis MY1 0.0016 0.0000 0.0016 0.0016 0.0016 0.0016 0.0016 0.0000 0.0016 0.0016 0.0016
13. G. malaccensis MY2 0.0016 0.0000 0.0016 0.0016 0.0016 0.0016 0.0016 0.0000 0.0016 0.0016 0.0016
14. G. malaccensis MY3 0.0016 0.0000 0.0016 0.0016 0.0016 0.0016 0.0016 0.0000 0.0016 0.0016 0.0016
15. G. malaccensis SUM2 0.0033 0.0016 0.0033 0.0033 0.0033 0.0033 0.0033 0.0016 0.0033 0.0033 0.0033
16. G. malaccensis SUM1 0.0033 0.0016 0.0033 0.0033 0.0033 0.0033 0.0033 0.0016 0.0033 0.0033 0.0033
17. G. malaccensis MY5 0.0032 0.0016 0.0032 0.0032 0.0032 0.0032 0.0032 0.0016 0.0033 0.0032 0.0032
18. G. malaccensis SBH 0.0032 0.0016 0.0032 0.0032 0.0032 0.0032 0.0032 0.0016 0.0033 0.0032 0.0032
12 13 14 15 16 17 18
13. G. malaccensis MY2 0.0000 –
14. G. malaccensis MY3 0.0000 0.0000 –
15. G. malaccensis SUM2 0.0016 0.0016 0.0016 –
16. G. malaccensis SUM1 0.0016 0.0016 0.0016 0.0000 –
17. G. malaccensis MY5 0.0016 0.0016 0.0016 0.0000 0.0000 –
18. G. malaccensis SBH 0.0016 0.0016 0.0016 0.0000 0.0000 0.0000 –
Fig. 3 Substitution sites and indels in internal transcribed spacer (ITS) sequences for G. mangostana L. (mangosteen) and
G. malaccensis Hook. f
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A. Mangosteens in clade B (TH3) and G (SAM) did
not cluster with others due to the presence of point
mutations in their sequences. Clade C, which shared a
unique M2 base substitution, consists of G. malaccensis
from Sumatera (SM1 and SM2) and southern Peninsular
Malaysia (MY5). Clade D consists of mangosteen-
masta along with G. malaccensis P4, supported by a
64 % bootstrap value because both shared sufficient ITS
sequence homology and the unique substitution site M8.
Garcinia malaccensis MY1, MY2, MY3 and mango-
steen PM1 grouped together as clade E due to 100 %
ITS sequence similarity. This cladogram also shows
Fig. 4 One of most parsimonious phylogenetic tree from a total
of three trees generated from 621 characters of internal
transcribed spacer (ITS) sequences. Number above branch
shows bootstrap values (shown for values [ 50 %). Informative
characters = 26, tree length = 101, consistency index
(CI) = 0.9307, homoplasy index (HI) = 0.0693, retention
index (RI) = 0.8478, rescaled consistency index
(RC) = 0.7891
Genet Resour Crop Evol (2014) 61:1147–1158 1155
123
that G. malaccensis from Borneo (Sabah) is quite
different and serves as the basal clade (clade G) for other
mangosteen and G. malaccensis accessions.
Discussion
Garcinia mangostana or mangosteen is morphologi-
cally closer to G. malaccensis than to G. penangiana
based on important characters of the male flowers,
especially petal colour, presence and shape of pistill-
odes, fruit, leaf colours, and glandular line patterns.
Some of these similarities were also observed by
previous taxonomists (Corner 1940; Whitmore 1973).
ITS sequence data also supported the close relation-
ship between mangosteen and G. malaccensis in
agreement with previous studies by Yapwattanaphun
et al. (2004) and Sweeney (2008). Most mango-
steen ITS sequences closely resemble those of
G. malaccensis, with some accessions such as man-
gosteen PM1 and masta displaying ITS sequences
identical to those of certain G. malaccensis accessions
(Fig. 3). It should be noted that morphological vari-
ation can be observed within different populations of
G. malaccensis, and between mangosteen and man-
gosteen-masta, and these are translated into paraphy-
letic clades in the cladogram (Fig. 4).
Mainly based on the absence of male individuals,
Richards (1990b) and Abdullah et al. (2012) stated that
mangosteen is an obligate agamospermous species
that originated from two different species, with
G. malaccensis being one of its parents. If mangosteen
is indeed an obligate agamospermous species, this
would indicate that no sexual reproduction has
occurred since the F1 generation that initially pro-
duced it. Thus, both parental ITS sequences should be
retained throughout the succeeding obligate apomictic
generations, for example, as in Passiflora (Lorenz-
Lemke et al. 2005), and, thus, there should be
considerable heterozygosity present within mango-
steen accessions, reflecting those parental differences.
Nevertheless, the electropherograms of ITS sequences
of mangosteen accessions indicate that only one
individual displays any heterozygosity at all (mango-
steen accession TH3 at position 200; Fig. 1), suggest-
ing that it is highly unlikely that mangosteen is an
obligate apomict originated from two different species
as suggested by Richards (1990b) and Abdullah et al.
(2012).
Based on ITS sequence similarity, the monophyletic
clade that includes both G. mangostana and
G. malaccensis, and close morphological resemblance,
these two species should be grouped together into a
single species that might then be differentiated into
different botanical varieties. The present study sug-
gests that Corner’s (1940) observation of wild mango-
steen is likely valid. By uniting G. mangostana and
G. malaccensis, there are still at least two possibilities
regarding the origin of mangosteen. Firstly, mangosteen
may indeed be a hybrid between different varieties of
G. malaccensis but that, in the generations since initial
hybridization, ITS sequences have undergone a phe-
nomenon known as concerted evolution. Concerted
evolution is a molecular process that homogenizes
different loci within multigene families (Arnheim et al.
1980). It is driven by two molecular processes, gene
conversion and unequal crossing over (Koch et al. 2003)
and is only effective with sexual reproduction. Koch
et al. (2003) outlined three possibilities for the evolution
of ITS in individuals that result from hybridization
between parents with two different ITS sequences: (1)
unidirectional concerted evolution leads to the loss of
one copy and fixation of the second; (2) concerted
evolution results in new ITS sequences that represent a
mixture of the two parental sequences; (3) both parental
ITS sequences are retained in the ‘non-concerted
evolution’ alternative. Mangosteens in Clade D and E
fit the description on possibility 1 of Koch et al. (2003)
where concerted evolution occurs in a unidirectional
way, which results in only one of the parental sequences
being retained. Although there is no information on how
much sexual reproduction is needed for ITS sequences
to homogenize in mangosteen, other findings such as in
Armeria Wild. (Fuertes Aguilar et al. 1999) indicated
that concerted evolution and homogenization to one
parental sequence could occur at a very rapid rate,
within two generations after hybridization.
The only problem with this possibility is the
chances of hybridization between varieties of
G. malaccensis is hindered by the difficulty of finding
male individuals since concerted evolution required
sexual fertilization. From the herbarium specimens
studied, I only found three males out of 20 specimens.
Thomas (1997) also observed a similar rarity of males
in some wild Garcinia species in the lowland forests of
Malaysia and suggested that if a species shows a
female biased sex ratio, it is probably a facultative
agamosperm. If this assumption is a good indication of
1156 Genet Resour Crop Evol (2014) 61:1147–1158
123
the presence of agamospermy, then G. malaccensis
may be facultative agamosperm and explains the rarity
of male trees. However, more study will be needed to
confirm the presence or type of agamospermy in G.
malaccensis, and it should be noted that data on
pollination biology in Garcinia is scarce with excep-
tion for mangosteen, G. celebica and G. penangiana
(see Ha et al. 1988; Richards 1990a, b).
If sexual reproduction is rare, a second possibility is
that mangosteen has arose from the products of multiple
human selection events from various wild populations
of G. malaccensis with a strong preference for only
retaining pistillate forms. Morphological and molecular
data have shown that variation exists within populations
of G. malaccensis and conveniently can be distin-
guished by geography into accessions from the east
coast of Peninsular Malaysia (MY1, MY2 and MY3),
the northern part of the east coast of Peninsular Malaysia
(MY4), southern Peninsular Malaysia and Sumatera
(MY5, SUM1 and SUM2), and Borneo (SBH). For two
of the most widely cultivated mangosteens in Peninsular
Malaysia, the common mangosteen originated from
wild populations of G. malaccensis resembling acces-
sions MY1, MY2 and MY3, while masta likely
originated from G. malaccensis MY4 or a close relative.
Taxonomic implications
Based on these findings, clearly G. mangostana and
G. malaccensis form a single interrelated taxon. Based
on priority of publication, if this group is to be treated as
a single species, G. mangostana would take priority
over G. malaccensis and the domesticated mangosteen
could still be recognised at the varietal level. A full-
taxonomic revision of Garcinia sect. Garcinia is now
underway, including proper taxonomic treatments of
the varieties of G. mangostana.
Acknowledgments This paper is an extension of works from
the author’s Ph.D. project supervised by Prof. Dr. Toby
Pennington and Dr. Mark Newman of Royal Botanic Garden
Edinburgh (RBGE), to whom the author is indebted. Numerous
field expeditions and molecular analyses were made possible
through grant RUGS 9364500 from the University Putra Malaysia
(UPM). I would like to thanks to the curator of these herbaria; A,
K, L, P, SING, SAR and UC for the loan materials. Curator and
staff of the following herbaria during my visit: K, BM, BO, KEP,
KINA, MARDI, SAR and SAN. My special thanks to Dr. Tadashi
Kajita of Chiba University for giving permission using his lab
during my stay in Japan, which was supported by the Japanese
Society for Promotion of Science (JSPS). My personal gratitude
also goes to Prof. Emeritus Dr. Abd. Latif Mohamed (UKM) for
his comments on the manuscript, James E. Richardson (RBGE)
for his valuable advice, the Forestry Department of Peninsular
Malaysia (especially to Senior Ranger Salleh Endut for
contribution of his photograph), Dr. Jamili Nais (Sabah Parks),
John Sugau (Sabah Forestry Centre), Rosslan Yaacob, and
colleagues in UPM especially Pn Latifah Zainal Abidin,
Shamsul Khamis and Nur Asyikin Psyquay.
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