Bayesian random-effects meta-analysis model for normal data – Pubrica

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Copyright © 2021 pubrica. All rights reserved 1 What is the Bayesian Random-Effects Meta- Analysis Model for Normal Data Dr. Nancy Agnes, Head, Technical Operations, Pubrica, [email protected] I. INTRODUCTION In healthcare studies, systematic reviews are valuable sources of evidence. These are regarded as having a high degree of evidence because they reduce bias during the evaluation process, offer detailed evidence regarding the efficacy of an experiment, and often resolve uncertainty caused by contradictory findings from various researches asking the same issue. Meta- analysis is an effective computational method for obtaining a single effect size by combining the outcomes of multiple individual experiments. As a result, the best level of proof is known to be a systematic study with meta-analysis.The conventional meta-analysis approach does not take into account previous knowledge from outside sources. As a result, a new approach to meta-analysis is established, in which historical data is combined using Bayesian principles. "The clear comparative use of external data in the design, control, study, and understanding of health care evaluation," according to the Bayesian approach. The prior belief about the parameter, which should be external to data, is one of the criteria of Bayesian meta-analysis. The observed data were paired with prior experience to provide new information about the parameter of interest [1]. The focus of this article is to define how extensively Bayesian methods have been used in meta-analysis, benefits, and implementations. II. BAYESIAN METHODS: THE PRINCIPLES Standard statistical inference means that the sample comes from a population with a fixed and undefined parameter. The sample information is used to make the whole parameter inference. On the other hand, the Bayesian method treats parameters as random variables with a probability distribution that reflects our prior knowledge. The likelihood function is summarised in the current data. The prior distribution and probability function was merged using Bayesian rules to produce the posterior distribution function [2]. III. META-ANALYSIS CONCEPT IN BAYESIAN METHOD There are four basic stages in a Bayesian meta- analysis [2]: (1) Choosing the Right Priorities The first step in Bayesian meta-analysis is to summarise the proof that isn't based on observed facts. This document reviews previous evidence and assumptions about intervention's relative benefits. Non-randomized experiments, invitro or invivo trials, experimental studies, or personal views may be used as verification. Since the parameters are called unpredictable random variables, prior distributions are applied to them. (2) Current Evidence The probability function of the parameters would be composed of observable data or impact predictions gathered from various studies asking the same query. For both measurable and unobservable quantities, a complete probability model is constructed. (3) Posterior The external information is then combined with the current data to arrive at a current understanding of the intervention's impact. As a result, the posterior distribution is derived by combining the prior distribution and the probability function. The revised proof is another name for the posterior. In addition, unlike conventional Meta-analysis, all inferences should be based on the posterior distribution. (4) Recapitulating In Bayesian Meta-analysis, the final step is to summarise the posterior distribution. The posterior distribution obtained is often of high dimension and complexity, necessitating computer-based packages (BUGS and WINBUGS) to execute the integrations. Simulation techniques like Markov Chain Monte Carlo are used to sample directly from the posterior distribution.As a result, all summary figures, such as mean, standard deviation, odds ratio, risk ratio, and so on, are calculated using those samples. Instead of 95 percent confidence intervals, 95 percent accurate intervals (2.5 percentile and 97.5 percentile of posterior distribution) were measured. In Bayesian meta-analysis, two methods are widely used, similar to conventional meta-analysis: fixed-effect and

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Transcript of Bayesian random-effects meta-analysis model for normal data – Pubrica

  • Copyright © 2021 pubrica. All rights reserved 1

    What is the Bayesian Random-Effects Meta-

    Analysis Model for Normal Data

    Dr. Nancy Agnes, Head, Technical Operations, Pubrica, [email protected]

    I. INTRODUCTION

    In healthcare studies, systematic reviews are valuable

    sources of evidence. These are regarded as having a

    high degree of evidence because they reduce bias

    during the evaluation process, offer detailed evidence

    regarding the efficacy of an experiment, and often

    resolve uncertainty caused by contradictory findings

    from various researches asking the same issue. Meta-

    analysis is an effective computational method for

    obtaining a single effect size by combining the

    outcomes of multiple individual experiments. As a

    result, the best level of proof is known to be a

    systematic study with meta-analysis.The conventional

    meta-analysis approach does not take into account

    previous knowledge from outside sources. As a

    result, a new approach to meta-analysis is established,

    in which historical data is combined using Bayesian

    principles. "The clear comparative use of external

    data in the design, control, study, and understanding

    of health care evaluation," according to the Bayesian

    approach. The prior belief about the parameter, which

    should be external to data, is one of the criteria of

    Bayesian meta-analysis. The observed data were

    paired with prior experience to provide new

    information about the parameter of interest [1].

    The focus of this article is to define how extensively

    Bayesian methods have been used in meta-analysis,

    benefits, and implementations.

    II. BAYESIAN METHODS: THE PRINCIPLES

    Standard statistical inference means that the sample

    comes from a population with a fixed and undefined

    parameter. The sample information is used to make

    the whole parameter inference. On the other hand, the

    Bayesian method treats parameters as random

    variables with a probability distribution that reflects

    our prior knowledge. The likelihood function is

    summarised in the current data. The prior distribution

    and probability function was merged using Bayesian

    rules to produce the posterior distribution function

    [2].

    III. META-ANALYSIS CONCEPT IN BAYESIAN

    METHOD

    There are four basic stages in a Bayesian meta-

    analysis [2]:

    (1) Choosing the Right Priorities

    The first step in Bayesian meta-analysis is to

    summarise the proof that isn't based on observed

    facts. This document reviews previous evidence and

    assumptions about intervention's relative benefits.

    Non-randomized experiments, invitro or invivo trials,

    experimental studies, or personal views may be used

    as verification. Since the parameters are called

    unpredictable random variables, prior distributions

    are applied to them.

    (2) Current Evidence

    The probability function of the parameters would be

    composed of observable data or impact predictions

    gathered from various studies asking the same query.

    For both measurable and unobservable quantities, a

    complete probability model is constructed.

    (3) Posterior

    The external information is then combined with the

    current data to arrive at a current understanding of the

    intervention's impact. As a result, the posterior

    distribution is derived by combining the prior

    distribution and the probability function. The revised

    proof is another name for the posterior. In addition,

    unlike conventional Meta-analysis, all inferences

    should be based on the posterior distribution.

    (4) Recapitulating In Bayesian Meta-analysis, the final step is to

    summarise the posterior distribution. The posterior

    distribution obtained is often of high dimension and

    complexity, necessitating computer-based packages

    (BUGS and WINBUGS) to execute the integrations.

    Simulation techniques like Markov Chain Monte

    Carlo are used to sample directly from the posterior

    distribution.As a result, all summary figures, such as

    mean, standard deviation, odds ratio, risk ratio, and so

    on, are calculated using those samples. Instead of 95

    percent confidence intervals, 95 percent accurate

    intervals (2.5 percentile and 97.5 percentile of

    posterior distribution) were measured. In Bayesian

    meta-analysis, two methods are widely used, similar

    to conventional meta-analysis: fixed-effect and

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  • Copyright © 2021 pubrica. All rights reserved 2

    random-effects models. The only difference between

    Bayesian Meta-analysis and conventional meta-

    analysis is that prior distributions for uncertain

    parameters are defined.

    IV. BAYESIAN META-ANALYSIS PROFITS AND

    CONTRAINDICATIONS

    In prior distribution, Bayesian meta-analysis

    integrates all applicable historical data outside of the

    litigation. They account for all uncertainties,

    especially when determining a predictive distribution

    for the true effect in a new sample. When there are a

    limited number of studies involved, or when studies

    have fewer case results, or when studies report only

    the summary estimation rather than its variance,

    Bayesian meta-analysis is sufficient. The posterior

    distribution is optimal for any decision-making

    situation [3], and the odds are more understandable

    than p values.They also provide for the interpretation

    of the likelihood or consequence of action. Prior

    probabilities can be used as a sensitivity analysis [4]

    instrument to search for robustness andanalyses and

    calculate various theories [5]. The main drawback is

    that as the number of parameters increases with the

    number of experiments, imposing vague priors on all

    parameters will lead to contradictory outcomes.

    Different prior distributions provide different

    outcomes. Researchers must exercise caution when

    using informative priors since they may significantly

    affect the posterior. The software's implementation

    necessitates excellence.

    V. FUTURE SCOPES

    Due to Bayesian's clear methodology for integrating

    external data, these approaches are commonly used in

    network meta-analysis. One renders both direct and

    indirect observations dependent on a generic

    comparator and ranks interventions. However,

    although software makes much of the work simpler, it

    still necessitates many computational assistance and

    skills.In the field of clinical trial proof synthesis,

    Bayesian meta-analysis has gained attention. Because

    public health interventions are geared to

    geographically heterogeneous demographic, multi-

    component interventions, context-specific, and

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  • Copyright © 2021 pubrica. All rights reserved 3

    various effects, it did not gain traction in

    summarising them. The use of conventional meta-

    analysis to combine the findings of such analyses has

    not been thoroughly studied. A recent effort was

    made to investigate the complexities of public health

    approaches and create a meta-analysis for public

    health interventions that took complexity into

    account.Any public health intervention's data is

    typically obtained from a mixture of retrospective and

    interventional trials. Since there is no common

    mechanism for combining the findings of

    retrospective and intervention trials, most systematic

    analyses are presented narratively. As a result, in

    complicated public health research, a reliable method

    of evidence synthesis is needed. Finally, Bayesian

    meta-analysis-specific reporting criteria must be

    established.

    REFERENCE

    [1] Lewis, Melissa Glenda and Nair, Sreekumaran

    N (2015) Review of applications of Bayesian meta-

    analysis in systematic reviews. Global Journal of

    Medicine and Public Health, 4 (1). pp. 1-9. ISSN

    2277-9604.

    [2]

    MatthaisE,GeorgeDS,JonathanAC(2002).Systematicr

    eviews and Meta-‐analysis. In: Oxford textbook of

    Public Health.4th

    ed. New York: Oxford University

    press.

    [3]Młynarczyk, Dorota; Armero, Carmen; Gómez-

    Rubio, Virgilio; Puig, Pedro. 2021. "Bayesian

    Analysis of Population Health Data" Mathematics 9,

    no. 5: 577. https://doi.org/10.3390/math9050577.

    [4]Mojtaba GANJALI, Taban BAGHFALAKI,

    Adeniyi Francis FAGBAMIGBE "A Bayesian

    sensitivity analysis of the effect of different random

    effects distributions on growth curve models,"

    AfrikaStatistika, Afr. Stat. 15(3), 2387-2393, (July

    2020)

    [5]Paulewicz, B., Blaut, A. The bhsdtr package: a

    general-purpose method of Bayesian inference for

    signal detection theory models. Behav Res 52, 2122–

    2141 (2020). https://doi.org/10.3758/s13428-020-

    01370-y.

    https://pubrica.com/academy/medical-writing/meta-analysis-of-convolutional-neural-networks-for-radiological-images/https://pubrica.com/academy/medical-writing/meta-analysis-of-convolutional-neural-networks-for-radiological-images/https://doi.org/10.3390/math9050577https://doi.org/10.3758/s13428-020-01370-yhttps://doi.org/10.3758/s13428-020-01370-y